Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001752525.2
Aligned Length:
2728
Identities:
63
Gaps:
2656

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGCTAGGTTTCGCCGGCCGCGCGGCCAGATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGTTGCAGGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCCCGCGAGAACGTGGAGGCAGCGCAGAGCTACCGGCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGTGAGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGGGATGTTCTCAAACAGCATTTTAATGATTTAAAGGGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAGGTGGACACCATTGAACAGGAGACCATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGAGGACTTAGTCCGAGAAGGTGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AATCGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAAAGGCCTCGCACATTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGATGACTCAATT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGAACT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGATGACTTTACAGCCCAAGATTACAGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCCAGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CACATAGACCCCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAGTGTCCCCCAGATAGGTCATTCCACATTGGTGCCTCATGAGTTGAAACTGTGGGACAGCCAGACAGAAGAGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCAGCGGGATCAAGCTGTGTGCATTAGTA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCCGCAGTTACTTCTGGGTCCACTGTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACGTTTGACATTGAAGCCGTGACTCTAGGAACCACCAGTAATAATGAAGGTGGACACTTCAAGCTTCGAGTAAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TATAAGTTCAAATAATAGAGAAGTGGTTTTTGACTGGTTACTTGATCAGTCTTGTGGTTCTCTTTACTTTGGAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAGATGTTTGGGTGCTTGGCTTTGGTTTTCAGGGTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TAACGTAGCTGTCCTCAGCCCAGCGTAGTTGTAATTGCTTTAAAAAAAAAGTTGAATTCATCTCTAACTTAGGC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CATTGGAAAGTGTTTACTGGATTCATTTTGTAATATTTTAGCAAAAAGAGACTTCAATGTTGTGGACAAAATCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TACAATTCAGTCAATTTTATTTTTAGCATACTGTTAAATATCACATCACAATAAAAATCAAATTGGCATTAAAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTATAGAAGATATAGGAAGTTCTATACCCTTCCACTGTACTTCTCAAAGTTGGTTATTAGACCAGGAAAACTTA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATGTAATATTATTTTTAAAATCATCTTAAAGGATCCAAGTCCATGTAACTCTTTAGAACAAGAGGAATAGGTCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GATAGAAGAAGCTGTGTAATGTATTAATACATCCGTTCATGTGCTGTCCACATGAATGTGTTGACTGTGCTCTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CATGTTCAGGTATTTGTAAGCAGTGTTGACTTTTATCCCCTCTTCAGTAATCTTTAAGTCCCCAAAACATTATA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACTTTTTCTTTTTTTGTTGAGACGGAGTCTCACTCTTGTCACTCAGGCTGGAGTGCAGTGGTGTGATCTCAGTT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CACTGCAACCTCTGCCTCCCACGTTCAAGCGATCCTCCTGCCTCAGGCTCCTGAGTAGCTGGGATTACAGGCGT  1924

Query    1  ----------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGG  34
                                                    |..|||||||.||||||.||.|||||||||||.|
Sbjct 1925  CGGCCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTG  1998

Query   35  AACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------  72
            ||||||||||||||||||.|||.|||||||||||||.|                                    
Sbjct 1999  AACTCCTGACCTCAGGTGTTCCACCCACCTCAGCCTTCCAAAGTGCTAGGATTACAGGTGTGAGCCACTGCAGT  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  GGACCAATTTTTGTATTTTTTTAAATGCTTGACCAAGTGTCTAAAATAGGCAAGTAGTACCTTTTGTTCTTTCA  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  TTGCAATTTGATACAGTATAGGCTACAGTATTTTTACAGGGTAAAACTAGTTATGGCAGTAGTATGCACAGCAG  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  TGTTAGCCATTTCATATGTATGTAATATGCACGTGTGTATCCAATCTGCCTGTGACATGCATTTTACTCTTTGC  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  AGAGAATGAGCTGCAGTCCAGTTTAATGTCAGTTTAATAAGTGGTCTCTTTTTAGCAGAGCAAAAAAATATAGC  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  GTAAATACTTATTTTTTTTAAAAACTTACTTAAATTTGTGTGTAAAATATTTATTTGAAGGACTTTAATATGTA  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  AAAATAATTGTCTTCTATGCCACCCTACAGATTTTATTTTAATGTGAATTATTTTTTTCATTTCATTTTTACCA  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  GTATAGTAAAAAAGTAGAAAAGCAAGTATGATATTTTTGTAAGATAATTTATTTGGGGATTCATGTTCCCTGTT  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  AGACAATCATGACCTTTTCTACTTGTCTTTTTATATATAAGTAGTAGATTTCCACTTGTTTAGGGATTAAGAAG  2664

Query   73  ----------------------------------------------------------------  72
                                                                            
Sbjct 2665  ATGTTCTAGAATGTAGATACCTTGTCCAGCCATAGGAATCAAAATAAAAAACTAAAAAAGTTCA  2728