Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_002956793.1
- Aligned Length:
- 4640
- Identities:
- 63
- Gaps:
- 4568
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACATCGGCCCCAGCCCCTGCCTGGGTCCCCATCCAGGACCCCCTTCCAGTCTCTGCCCCTGGCCTGGCCCCCAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGGCCTCGGCCCTCGTTCCACCCCCTGTCACAAATCCCAGCCCAGGCCCTGTCCCAGCCCCATTCCCAGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGCTTAAGGCCCTGGCTCAACCCCGTCCCTTGCTGCAGTCCCCATCACAGCCCTTCCTTCCATCCCACTCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCTTGTTCAAGCCCCAGTGTCCAGCCCAGCCCAACCCATTATCTCAGCCTTTGCCCTCATCTCTGTGTTTAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAAGTCTCTCCCTCTAGTCCCCCCTATCTCTCATACTCTGCCCCTCTCCCAGCCTAGACTCAAGTCTGGGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCTGCCGCCAGCCCTATTGCTGCTGTTGCTGTTCTCTGTCCTTGGCCCAGGGGCTGGAGGCCTTTTCCTGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGATTACTCCACCTGCTCACCCCGCAAGCTGAGTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCCACTTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGTTCCTGAGGACACATTCCTGGCTGTTTGGAACCTCATCATCTTCAAGGAGCAAGGGGGAACTTTTGGGGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CACTGCCCAGACCAAAGTGTGACTGTGTATTTCCGGTCCGGGGCACCCCCTGTCATCAATCCCCTGCATACACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTCCCAGGGGACACAGCTGTGCCTGGGGTTTTCTCACTGACCCTCAGCTGGACACTGCCCAACCGCACCTCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCATCTTTAACGTCAGCAGCCCCTTACCTGGGGACTGGTTCTTGGCTGCCCACCTTCCCCAGGCCCACGGCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCTCTGTCAAGGGTCTCCAGGATGAGTGTCAGTACCTCCTTCAGCCGCAGCTGATTGTCCGGCGTTTGCTGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGTCGCTGTGCTGGTTCCTGGCCGGCCCTCAGAGCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTACAAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTTTGTGCCCAGCTTCACTTACAGGGTTTCAGCACAGCTGGTGTGTGTGGGGGGCCGTGGGGTATCTGCCTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCCTGTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGCACAACTCAAGCTCTGTGGCCTGTGGAGGTGCCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGATGCCAGCTGGAGCTGGCACTGCCCCCCTGGGGGCACTGGGTCTACGTGCGTGTGGAAACATCATCCCGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCCTGGTAGGACCATCCGCTTCCAGCTGTGTGTGCGGTTGCAAGAGTGCCCACAGCCCGGCCTGCTCCGAGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGGTCCCTGGAGCTGCCATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGAACCCCTGCGGAGGGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGAGCTGGACACCTTCTCTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTTTTCTGTTCTGAGAATGGAGAGCTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGTTCTATCATGCCTGTGACCAGCCAGGCAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CGTGGTTTTCTGCATCATGGACTACGATGTGCTGCAGTTCTGTGATTTCCTGGGCTCCTTAATGTCCGTGTGGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCACTGTCATTGCCATGGCTCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATTTGCTGGGAGCTATGCTGCTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCCATGGCTCTGCAGCTTGACCGACATGGACTCTGGAACCTGCTTGGACCCAGTCTCTTCGCCCTGGGGATCTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGCCACAGCCTGGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATGGAGTCCTTCTTAAGGACTGGAGCCTATGCAGGCACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCAGGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTGGAGCCTTTCCTGGGATGCAGAGCCTTCCCAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCACAGCATCTTTCCAGAGGAGGTGGAGTCTATCTTGGGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AACTCTGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGGCTGTGCTGTGCTGTGGAGGAGGGATTGCAGGAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGATGGAGCTGGGACTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTGTCTCCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GTGATTGATTGGTTCAGAATGGTTCTGTGATGCCTTTTTTCCCCCTGGGGTCAGGGGTGTGGGGAAGTGGGGAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGAGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTGTCACACCCTGTACACAGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTGATCCCGCTCATCTGGGCCCTGCATTCATTTCTAAACAGTTTCTAATGCCTATTCCCCAATTCCTATTGAGC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTTTATGTATGTATACGTATGCTGAGATGATTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAATCAGTGAGACAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGGAAATTGGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATGTAACTTCTGTTTTGAGCCCCCATTTTTCC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGAGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGTCATAGCTGAGTTCTGAGG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GTCTTACATAATGCCAAGAAGTTGGGAGAGCATTCTCACTGATCACCAGTGTCCATACTTCATCCATCCCCGGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATTTCCATCATTCCATCTGGTCCCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCATTTGCATTACTCTCTCAGTCCTAAGGTTCTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TCTAAGGCCTTGGCTATGCAGACACACCTTGAAGCTGTTTCTGCTCTGGGTTTTGACAGACAAGGCATGAGTTG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CTGCATCTGTTAAAACTGCAAATCTATCTTGGCCTGGGGTGTGGAGCTCAGGGACTCTTCCTTTTGGGACCCTC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGTGTCAGTATTCTCACTACATCCTCTCCTCCTCTCTCTTCTTTCCCCCTTTCGTTAATATTGGAGGTGAGGAA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GCCTTACTTAATGTTTTCTCCTGAATCTTTTTTTTTTTGAGACGGAGTTTTGCTCTTGTTGCCCAGGCTGGAAT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GCAATGGTGCGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGTCTCAGCCTCCCGA 3922
Query 1 ------------------------------------------------------------ATGGGGTTTCTCCA 14
||||||||||||||
Sbjct 3923 GTAGCTGGGATTAGAGGTGTGCACCACCAAGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCA 3996
Query 15 TGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------- 72
|||.||||||||||.|||..||||||.|.|||||||||||||.|||.||||.||||||
Sbjct 3997 TGTTGGTCAGGCTGCTCTCAAACTCCCGGCCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTA 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CAGTTGTGAGCCACCGCGCCTGGCCTCTCCTGAATCTTTTATCTATGCCTTAAGCCTTTTCTGTTCCCTTCAGG 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 ACCTAGGCTTTTGAAACCCAAAAGCCAGGAAAACATGCCTTTGTTATCTGCTTTCTGCAATCACGTCTCTTCCA 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TGGGGCACTGAGCAGAGAATGGTGTGGCCAAGTGAGTAGTGAGAAGCAGTGAGGAGGTGTGAGCTAGGTGTCTG 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TTCCCATTTTAGAAAATACTGTTCCTACATCAGAAATACCACATTAAGACGTATAGAGCCAGGTCACTGGGATG 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CTTGAACCCAAATAGCTGGGATTCTGGACAGAGTCAGCAGAGTACAGAAGGCTCTGAAGTGGGAGACGGAGCTG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 GGGTGCATCCCTCCCAGTGAGGAGGGGTCATGAGGGGCGTCTGGGAAGAGGGACATTTGAACTAGGATTAGCTG 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 AGTTGCCATGATGCTAAGATAATGGGAGAGTGTTCTTTGTGGTCACCAGTGTCCACATGGCATCCCTTCCCTGA 4588
Query 73 ---------------------------------------------------- 72
Sbjct 4589 GATTTTCATCACTCCCTGTGGTCTTCAGTCAGTAAAGCTCTTAGAACACTTG 4640
