Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_002957562.1
- Aligned Length:
- 6931
- Identities:
- 63
- Gaps:
- 6859
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAATGGGGAAGACAACCCTGAGATAGCAGCTGCGATTGAGGAAGAGCGAGCCAGCGCCCGGAGCAAGCGGAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCCCCAAGAGCCGGAAAGGGAAGAAAAAATCCCAGGAAAATAAAAACAAAGGAAACAAAATCCAAGACATACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTGAAGACAAGTGAGCCAGATTTCACCTCTGCAAATATGAGAGATTCTGCAGAAGGTCCTAAAGAAGACGAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAAGCCTTCAGCCTCAGCACTTGAGCAGCCGGCCACCCTCCAGGAGGTGGCCAGTCAGGAGGTGCCTCCAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTAGCAACCCCTGCCCCTGCCTGGGAGCCACAGCCAGAACCAGACGAGCGATTAGAAGCGGCAGCTTGTGAGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAATGATTTGGGGGAAGAGGAGGAGGAGGAAGAGGAGGAGGATGAAGAAGAAGAAGAAGATGATGATGATGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTTGGAAGACGAGGGGGAAGAAGAAGCCAGCATGCCAAATGAAAATTCTGTGAAAGAGCCAGAAATACGGTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATGAGAAGCCAGAAGATTTATTAGAGGAACCAAAAACAACTTCAGAAGAAACTCTTGAAGACTGCTCAGAGGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACACCTGCCATGCAAATCCCCAGAACTAAAGAAGAGGCCAATGGTGATGTATTTGAAACGTTTATGTTTCCGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCAACATTGTGAAAGGAAGTTTACAACCAAACAGGGGCTTGAGCGTCACATGCATATCCATATATCCACCGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATCATGCTTTCAAATGCAAGTACTGTGGGAAAGCCTTTGGCACACAGATTAACCGGCGGCGACATGAGCGGCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCATGAAGCAGGGTTAAAGCGGAAACCCAGCCAAACACTACAGCCGTCAGAGGATCTGGCTGATGGCAAAGCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGAGAAAACGTTGCTTCAAAAGATGATTCGAGTCCTCCCAGTCTTGGGCCAGACTGTCTGATCATGAATTCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGAAGGCTTCCCAAGACACAATAAATTCTTCTGTCGTAGAAGAGAATGGGGAAGTTAAAGAACTTCATCCGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAAATATTGTAAAAAGGTTTTTGGAACTCATACTAATATGAGACGGCATCAGCGTAGAGTTCACGAACGTCATC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGATTCCCAAAGGTGTACGGCGAAAAGGAGGCCTTGAAGAGCCCCAGCCTCCAGCAGAACAGGCCCAGGCCACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGAACGTGTATGTACCAAGCACAGAGCCGGAGGAGGAAGGGGAAGCAGATGATGTGTACATCATGGACATTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAGCAATATCTCTGAAAACTTAAATTACTATATTGATGGTAAAATTCAAACTAATAACAACACTAGTAACTGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGTGATTGAGATGGAGTCTGCTTCGGCAGATTTGTATGGTATAAATTGTCTGCTCACTCCAGTTACAGTGGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTACTCAAAATATAAAGACCACACAGGTCCCTGTAACAGAAGATCTTCCTAAAGAGCCTTTGGGCAGCACAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGTGAGGCCAAGAAGCGGAGAACTGCGAGCCCACCTGCACTGCCCAAAATTAAGGCCGAAACAGACTCTGACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCATGGTCCCCTCTTGCTCTTTAAGTCTTCCTCTTAGCATATCAACAACAGAGGCAGTGTCTTTCCACAAAGAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAAAGTGTTTATTTGTCATCAAAGCTCAAACAACTTCTTCAAACCCAAGATAAACTAACTCCTGCAGGGATTTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCAACTGAAATAGCTAAATTAGGTCCTGTTTGTGTGTCTGCTCCTGCATCAATGTTGCCTGTGACCTCAAGTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGTTTAAGAGGCGGACCAGCTCTCCTCCCAGTTCTCCACAGCACAGTCCTGCCCTTCGAGACTTTGGAAAGCCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTGATGGGAAAGCAGCATGGACCGATGCCGGGCTGACTTCCAAAAAATCCAAATTAGAAAGTCACAGCGACTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACCAGCATGGAGTTTGTCTGGGAGAGATGAGAGAGAAACTGTGAGCCCTCCATGCTTTGATGAATATAAAATGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTAAAGAGTGGACAGCTAGTTCTGCTTTTAGCAGTGTGTGCAACCAGCAGCCACTGGATTTATCCAGCGGTGTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAACAGAAGGCTGAGGGTACAGGCAAGACTCCAGTCCAGTGGGAATCTGTCTTAGATCTCAGTGTGCATAAAAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCATTGTAGTGACTCTGAAGGCAAGGAATTCAAAGAAAGTCATTCAGTGCAGCCTACGTGTAGTGCTGTAAAGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAAGGAAACCAACCACCTGCATGCTGCAGAAGGTTCTTCTCAATGAATATAATGGCATCGATTTACCTGTAGAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACCCTGCAGATGGGACCAGGAGCCCAAGTCCTTGTAAATCCCTAGAAGCTCAGCCAGATCCTGACCTCGGTCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGGCTCTGGTTTCCCTGCCCCTACTGTTGAGTCCACACCTGATGTTTGTCCTTCATCACCTGCCCTGCAGACAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCTCCCTTTCATCCGGTCAGCTGCCTCCTCTCTTGATCCCCACAGATCCCTCTTCCCCTCCACCCTGTCCCCCG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTATTAACTGTTGCCACTCCGCCCCCTCCCCTCCTTCCTACCGTACCTCTTCCAGCCCCCTCTTCCAGTGCATC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCCACACCCATGCCCCTCTCCACTCTCAAATGCCACCGCACAGTCCCCACTTCCAATTCTGTCCCCAACAGTGT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCCCCTCTCCCTCTCCCATTCCTCCCGTGGAGCCCCTGATGTCTGCCGCCTCACCCGGGCCTCCAACACTTTCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TCTTCCTCCTCTTCATCTTCCTCCTCCTCTTCGTTTTCTTCTTCATCTTCCTCCTCTTCTCCTTCTCCACCTCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCTCTCCGCAATATCATCTGTTGTTTCCTCTGGTGATAATCTGGAGGCTTCTCTCCCCATGATATCTTTCAAAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGGAGGAATTAGAGAATGAAGGTCTGAAACCCAGGGAAGAGCCCCAGTCTGCTGCTGAACAGGATGTTGTTGTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAGGAAACATTCAACAAAAACTTTGTTTGCAACGTCTGTGAATCACCTTTTCTTTCCATTAAAGATCTAACCAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACATTTATCTATTCATGCTGAAGAATGGCCCTTCAAATGTGAATTTTGTGTGCAGCTTTTTAAGGATAAAACGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACTTGTCAGAACATCGCTTTTTGCTTCATGGAGTTGGGAATATCTTTGTGTGTTCTGTTTGTAAAAAAGAATTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GCTTTTTTGTGCAATTTGCAGCAGCACCAGCGAGATCTCCACCCAGATAAGGTGTGCACACATCACGAGTTTGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAGCGGGACTCTGAGGCCCCAGAACTTTACAGATCCCAGCAAGGCCCATGTAGAGCATATGCAGAGCTTGCCAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAGATCCTTTAGAAACTTCTAAAGAAGAAGAGGAGTTAAATGATTCCTCTGAAGAGCTTTACACGACTATAAAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATAATGGCTTCTGGAATAAAGACAAAAGATCCAGATGTTCGATTGGGCCTCAATCAGCATTACCCAAGCTTTAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ACCACCTCCATTTCAGTACCATCACCGTAACCCCATGGGGATTGGTGTGACAGCCACAAATTTCACTACACACA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 ATATTCCACAGACTTTCACTACCGCCATTCGCTGCACAAAGTGTGGAAAAGGTGTCGACAATATGCCGGAGTTG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CACAAACATATCCTGGCTTGTGCTTCTGCAAGTGACAAGAAGAGGTACACGCCTAAGAAAAACCCAGTACCATT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AAAACAAACTGTGCAACCCAAAAATGGCGTGGTGGTTTTAGATAACTCTGGGAAAAATGCCTTCCGACGAATGG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GACAGCCCAAAAGGCTTAACTTTAGTGTTGAGCTCAGCAAAATGTCGTCGAATAAGCTCAAATTAAATGCATTG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AAGAAAAAAAATCAGCTAGTACAGAAAGCAATTCTTCAGAAAAACAAATCTGCAAAGCAGAAGGCCGACTTGAA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AAATGCTTGTGAGTCATCCTCTCACATCTGCCCTTACTGTAATCGAGAGTTCACTTACATTGGAAGCCTGAATA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 AACACGCCGCCTTCAGCTGTCCCAAAAAACCCCTTTCTCCTCCCAAAAAAAAAGTTTCTCATTCATCTAAGAAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGTGGACACTCATCACCTGCAAGTAGTGACAAAAACAGTAACAGCAACCACCGCAGACGGACAGCGGATGCGGA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GATTAAAATGCAAAGCATGCAGACTCCGTTGGGCAAGACCAGAGCCCGCAGCTCAGGCCCCACCCAAGTCCCAC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TTCCCTCCTCATCCTTCAGGTCCAAGCAGAACGTCAAGTTTGCAGCTTCGGTGAAATCCAAAAAACCAAGCTCC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TCCTCTTTAAGGAACTCCAGCCCGATAAGAATGGCCAAAATAACTCATGTTGAGGGGAAAAAACCTAAAGCTGT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GGCCAAGAATCATTCTGCTCAGCTTTCCAGCAAAACATCACGGAGCCTGCACGTGAGGGTACAGAAAAGCAAAG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 CTGTTTTACAAAGCAAATCCACCTTGGCGAGTAAGAAAAGAACAGACCGGTTCAATATAAAATCTAGAGAGCGG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AGTGGGGGGCCAGTCACCCGGAGCCTTCAGCTGGCAGCTGCTGCTGACTTGAGTGAGAACAAGAGAGAGGACGG 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 CAGCGCCAAGCAGGAGCTGAAGGACTTCAGCTACAGCCTCCGCTTGGCGTCCCGATGCTCTCCACCAGCGGCCC 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 CGTACATCACCAGGCAGTATAGGAAGGTCAAAGCTCCAGCTGCAGCCCAGTTCCAGGGACCATTCTTCAAAGAG 4736
Query 1 -------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGA 43
|..|||||||..|||||.||.|||||||||||.||||||||||
Sbjct 4737 TAGACACTCTGGCTGCTCCCTGACAGTAGAGACTGGGTTTCATCATGTTGGCCAGGCTGGTCTCGAACTCCTGA 4810
Query 44 CCTCAGGTGATCCGCCCACCTCAGCCTCC--------------------------------------------- 72
|||||.||||||.||||||||||||||||
Sbjct 4811 CCTCAAGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGTGATTACAGGCGTGAGCCACCGCGCCCAGCCTGCA 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 GTGAACATTATTAAGGATTCACCCATGTGCTCAGCTCTGGACTAAGCACTGTGAATGTGGTTTCTGCGGAGGAA 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 GCATGCGGGAACAGCCATCCCCTCCCGACTGGAAGAGCACACAGATGCTGGACACCTGAAGTGACCTGGAATCA 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 GTGAAGCCAAAGGGACTGGCAGTCTGCCCTGCAGGGAGTACCGACCTATCCCAGTTGTGTGAGGCTGCGAGAGA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 AAGGGAGTGCATGTGCGCGCGTGCATGTGTGCGTGCGTGTGTGTTCACGTGTTCTCGTGCGGGCGCGTGAGTGG 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 TCTTCAAACGAGGGTCCCGATCCCCGGGGCGGCAGGAAGGGGGCCGACTCCACGCTGTCCTTTGGGATGATACT 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 TGGATGCAGCTCTTGGGACCGTGTTCTGCAGCCCAGCCTTCCTGTTGGGGTGGGGCCTCTCCTACTATGCAATT 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 TTTCAAGAGCTCCTTGACCCTGCTTTTTGCTTCTTGAGTTGTCTTTTGCCATTATGGGGACTTTGGTTTGACCC 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 AGGGGTCAGCCTTAGGAAGGCCTTCAGGAGGAGGCCGAGTTCCCCTTCAGTACCACCCCTCTCTCCCCACCTTC 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 CCTCTCCCGGCAACATCTCTGGGAATCAACAGCATATTGACACGTTGGAGCCGAGCCTGAACATGCCCCTCGGC 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 CCCAGCACATGGAAAACCCCCTTCCTTGCCTAAGGTGTCTGAGTTTCTGGCTCTTGAGGCATTTCCAGACTTGA 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 AATTCTCATCAGTCCATTGCTCTTGAGTCTTTGCAGAGAACCTCAGATCAGGTGCACCTGGGAGAAAGACTTTG 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 TCCCCACTTACAGATCTATCTCCTCCCTTGGGAAGGGCAGGGAATGGGGACGGTGTATGGAGGGGAGGGATCTC 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 CTGCGCCCTTCATTGCCACACTTGGTGGGACCATGAACATCTTTAGTGTCTGAGCTTCTCAAATTAGCTGCAAT 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 AGGAAAAAAACAAATTGGGAAATGAAAAAAAAATGGGAAGATTAAAAAGCACAGGGGGAAGAAGAAGAGATTTC 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 GGAGGCCATCCTGCCAGGGGCGGACGGGGCTGACTCCTGCTCTCTGGAGGACGGTCAGTCCATGTCTCGGAGAA 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 ACGGGTGAGCTGAGCTTGGCGTTTGGACCCAGTTCAGTGAGGTTCTTGGGTTTTGTGCCTTTGGGGCAGACCCC 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 AGGCAAGGATGTCTGAGACCACTTGGGCGCTGTTTTCTCAGCTCCAATTTCAAGAGTGAGCTATCAAACCCAGA 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 GCGGAAGGAGGGAGCTCTGATGAGCACGGTTTGTCACACGATAAAGGGATTTTTTTTTTCAGGGCTACTACGGT 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 TGATCTTGCAACTCTGTAAATATGTATGTAGACACTTTTAAAAGCACGTATTTATGTCCCTGACTGTAAATGCT 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 CCATTTTTAAAGTTTTATAACTTGTGTTATTTAATGAGTCAGTCAATCGGCTGCAGTATGGGATCTGATAAGGA 6364
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6365 TCTAGGAGAAGGGTCTCATGCGGACCCTCACATGGGCAGAAAAATGGTGGTCATTGGCCGACATCACAGTTTTC 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 CTGTTTCCCACCCAGCTAAAAACCGTTGTTTGCTTTAAATTTTCATAAACTGGAATCCTTTCACCCGCTCCTAC 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 AGCTAACCCTCACAAGCATGAAGTGCTGTGGCTGTTCCTTATCCTAATGATGCGCTTTTGTCCCGTAAATGTTA 6586
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6587 ACACTCATGAAGCATACCCCGGCCTCTCAGTTCTTGAGGGCCTCCCCACCGCAGCAGCAAGGAAAGCTCACGAA 6660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6661 CCCCAAACCTGGCAAGTCACCTGCAGCCCATGGTGAGCTCTGGGAAGTGTGGTTGAGGCCTTGGGGTCACTCCT 6734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6735 TTTTTGCATGTGCAAATGTGCTGGTCACCCTTCAACGCTCCCAGACGGTCAGGAAAACTGTTCCAATCATGAAA 6808
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6809 AGGGGGGATGATTTTGTAAAAGTGGCATTTCCTGGTCAGTGGTGGTCTTCAAGACGACAGCTCTGTATCTGCCA 6882
Query 73 ------------------------------------------------- 72
Sbjct 6883 TGTGAAGAGAATTAACAATAAAAGTGTGAAGAGCGATTGTGAGGAACAA 6931
