Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10302
- Subject:
- XM_017314390.1
- Aligned Length:
- 7086
- Identities:
- 272
- Gaps:
- 6783
Alignment
Query 1 ATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCATTCAGCACAGAACAAAGTCATTATCCTCCTCACTCTGT 74
|||||||||||||||||||||||||||||||||||.|||||||||||.|||||||.|||||||.|.||.|||||
Sbjct 1 ATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCTTTCAGCACAGAGCAAAGTCGTTATCCTTCACATTCTGT 74
Query 75 AAAGTATACGTTTCCCAGCACCCACCACCAGC------------------------------------------ 106
..|||||||.||||||||.||||..|||||||
Sbjct 75 CCAGTATACCTTTCCCAGTACCCGACACCAGCAGGAATTTGCAGTTCCTGACTACCGCTCTTCTCATATTGAAG 148
Query 107 -------------------------------------------------------------------------- 106
Sbjct 149 TTAGCCAGGCATCACAGCTTTTACAGCAGCAGCAGCAGCAGCAGCAGCTTCGAAGACGACCTTCCTTGCTTTCA 222
Query 107 -------------------------------------------------------------------------- 106
Sbjct 223 GAATTTCACCCGGGTTCTGACAGGCCTCAAGAAAGGAGAACTGGATATGAACAGTTTCACTCAGGACCCTCACC 296
Query 107 -------------------------------------------------------------------------- 106
Sbjct 297 GGTGGATCATGATTCCTTGGAGTCCAAGCGCCCACGCCTGGAGCCAGTTTCTGATGCCCATTTCCAGCGTGTTA 370
Query 107 ------------------------------------------------------------------AGGATCCA 114
|||||.||
Sbjct 371 GTGCTGCGGTTTTACCTTTAGTTCACTCGCTGCCAGAAGGCTTGAGGTCGTCTGCAGATGCTAAGAAGGATTCA 444
Query 115 GCATTTGGAGGCAAACATGAAGCTCCATCCTCTCCAATTCTG---GGGCAACCGTGTGGAGATGATCAAAATGC 185
|||||||||.||||||||||||||||||||||||| |.|| ||||||||.|||||||||||.||||||||
Sbjct 445 GCATTTGGAAGCAAACATGAAGCTCCATCCTCTCC---TTTGGCTGGGCAACCATGTGGAGATGACCAAAATGC 515
Query 186 TTCACCTTCAAAACTTTCAAAGGAAGAGTTAATAGAGTGTATGGATCGTGTAGATCGAGAAATTGCAAAAGTAG 259
||||||||||||.|||||||||||.|||||||||.||.|||||||.||.|||||.|||||.|||||||||||||
Sbjct 516 TTCACCTTCAAAGCTTTCAAAGGAGGAGTTAATACAGAGTATGGACCGGGTAGACCGAGAGATTGCAAAAGTAG 589
Query 260 AACAGCAGATCCTTAAACTGAAAAAGAAACAA----------------------GTAA---------------- 295
|.|||||||||||||||.|||||||||||||| .|||
Sbjct 590 AGCAGCAGATCCTTAAATTGAAAAAGAAACAACAACAGCTAGAAGAAGAAGCAGCTAAGCCCCCTGAACCAGAG 663
Query 296 AAGTCTTCGTC--------------------------------------------------------------- 306
|||.||..|||
Sbjct 664 AAGCCTGTGTCCCCTCCTCCTGTGGAACAAAAACACCGTAGTATTGTCCAAATTATTTATGATGAGAATCGGAA 737
Query 307 -------------------------------------------------------------------------- 306
Sbjct 738 AAAAGCAGAAGAAGCTCATAAAATATTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCACTCTATAACCAGCCAT 811
Query 307 -------------------------------------------------------------------------- 306
Sbjct 812 CAGATACCAAGGTGTACCATGAGAACATCAAGACTGGAGTACCTGCAAGGCGCATGATGAAAAACCAGGTGATG 885
Query 307 -------------------------------------------------------------------------- 306
Sbjct 886 AGGAAAAAACTCATTTTATTTTTTAAAAGAAGAAATCATGCAAGAAAACAAAGGGAACAAAAAATCTGCCAGCG 959
Query 307 -------------------------------------------------------------------------- 306
Sbjct 960 CTATGATCAGCTCATGGAAGCGTGGGAGAAAAAAGTGGACAGAATAGAAAATAATCCCCGGAGGAAAGCAAAAG 1033
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1034 AAAGCAAAACAAGGGAATACTATGAGAAGCAGTTTCCAGAAATTCGAAAACAAAGAGAACAGCAAGAAAGATTT 1107
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1108 CAGCGAGTTGGTCAGAGGGGAGCTGGTCTTTCAGCCACCATTGCTAGGAGTGAGCATGAGATTTCTGAAATTAT 1181
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1182 TGATGGTCTTTCTGAACAGGAGAATAATGAGAAGCAAATGCGTCAGCTTTCTGTGATTCCACCTATGATGTTTG 1255
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1256 ATGCAGAACAAAGAAGGGTCAAATTCATCAATATGAATGGGCTGATGGAGGATCCAATGAAGGTTTATAAAGAC 1329
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1330 AGACAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGATCTTTAAGGACAAGTTTATCCAGCATCCAAAAAA 1403
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1404 CTTTGGACTAATTGCATCCTATTTGGAAAGGAAGAGTGTTCCTGATTGTGTTTTATATTACTATTTAACCAAGA 1477
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1478 AAAATGAGAATTATAAGGCCCTCGTGAGAAGGAATTATGGAAAACGCAGAGGCAGAAATCAGCAGCAGATTGCC 1551
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1552 CGTCCCTCACAAGAAGAAAAAGTAGAAGAAAAGGAAGAGGATAAAGCAGAAAAAACAGAGAAAAAGGAAGAAGA 1625
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1626 AAAGAAGGATGATGAAGAAAAAGATGATAAGGAAGACTCTAAAGAAACAACCAAGGAAAAGGACAGAACGGAAG 1699
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1700 CCACAGCAGAAGAACCTGAAGAAAGAGAGCAGGTCACTCCAAGGGGGCGAAAGACTGCTAACAGCCAAGGCCGC 1773
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1774 CGGAAGGGCCGGGTCACCAGGTCGATGACAAGTGAAGCTGCAGCTGCCAATGCTGCTGCTGCAGCCACTGAGGA 1847
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1848 GCCCCCGCCACCCCTGCCGCCACCACCAGAGCCCATTTCTACAGAACCTGTTGAGACTTCAAGATGGACAGAAG 1921
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1922 AAGAAATGGAAGTTGCTAAAAAAGGCCTGGTAGAACATGGTCGTAACTGGGCAGCCATTGCTAAAATGGTGGGA 1995
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1996 ACTAAAAGTGAAGCCCAGTGCAAAAACTTCTATTTTAACTATAAAAGACGGCATAATCTTGACAACCTTTTGCA 2069
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2070 GCAACATAAACAGAAAGTGAGTAGAGCAGTAGTGGCTTCACGGAAACCCCGTGAGGAACGAGATGTATCTCAGT 2143
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2144 GTGAAAGTGTTGCTTCCACTGTTTCTGCCCAAGAGGATGAAGATATTGAAGCCTCAAATGAGGAGGAAAATCCA 2217
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2218 GAAGATAGTGAAGGTGCTGAAAATAGTTCTGATACAGAAAGTGCTCCCTCTCCTTCACCAGTTGAAGCTGCCAA 2291
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2292 GTCCAGTGAAGACAGCAGTGAAAATGCTGCTTCTCGAGGAAACACCGAGCCTGTGGCTGAGCTTGAGGCCACCA 2365
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2366 CTGACCCTGCACCCTGTGCATCTCCCTCTTCAGCAGTTCCAACCACAAAACCAGCAGAAAGGGAAAGCGTGGAG 2439
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2440 GCCCAGGTGACCGACAGCGCCAGTGCTGAGACCGCAGAGCCGATGGACGTAGACCATGAGGAGTGCGGTGCCGA 2513
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2514 GGGCAGTTCTGTTCTTGATCCACCAGCCCCTACCAAAGCCGACTCCGTGGACCCAGAAATGCAGGTACCAGAAA 2587
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2588 ATACTGCGTCTAAAGGTGAAGGGGATGCCAAGGAAAGAGACTTGGAGAGCACCAGTGAGAAGACAGAGGCTAGA 2661
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2662 GATGAAGACGTGGTAGTGGCTGAACAGATCGAGAGGCCTGAGCCACAGTCAGACGACGACTCCAGTGCCACTTG 2735
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2736 CAGTGCGGATGAGGGTGTGGATGGAGAGCCAGAGAGGCAGAGAGTGTTTCCCATGGATGCAAAGCCTTCATTGT 2809
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2810 TAACTCCTCCTGGATCTATCCTAATCTCATCCCCTATTAAACCAAACCCATTGGATCTGCCACAGCTTCAGCAT 2883
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2884 CGAGCTGCTGTTATTCCACCAATGGTTTCTTGCACTCCATGTAATATACCAATTGGAACGCCCGTAAGTGGCTA 2957
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2958 TGCTCTTTACCAACGGCACATTAAGGCCATGCATGAGTCAGCACTCCTGGAGGAGCAGCGGCAGAGGCAAGAAC 3031
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3032 AGGTAGACTTGGAATGCAGAAGCTCTACAAGCCCATGCAGCACTTCTAAGAGTCCAAACAGGGAGTGGGAAGGA 3105
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3106 AAATCAGTCGCCTATATGCCTTATGCTGAGGTCAAACGTGCTCTAGAGCAGGAAGCACACATGCACAGTACCGC 3179
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3180 AGCAAGGTCAGCCTCACCGTGCAGGCTCTCTCCAAGAGAAGTCAGTAAAGCCGCTTCCCAGCCTGATATGAGTG 3253
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3254 CAGCCCGCTATAGTGTCCCTCCAGTCCTCCAACCTGCTCCGCATCAAGTGATAACTAACCTTCCTGAAGGGGTT 3327
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3328 CGGCTTCCAACAACACGACCAACCAGGCCACCACCTCCCCTCATCCCATCATCTAAAACCACAGTGGCATCAGA 3401
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3402 AAAACCATCCTTTATAATGGGAGGGTCTATCTCACAGGGAACTCCTGGCACTTACTTGTCTTCTCATAATCAGG 3475
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3476 CTTATCCACAAGAAGCCCCTAAGCCCTCCGTGGGGTCTATCTCTCTGGGATTGCCCCGGCAGCAGGAGTCTACC 3549
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3550 AAAGCAGCTCCTTTGACCTACATCAAGCAGGAAGAATTTTCTCCGAGAAGCCAAAACTCACAACCTGAGGGTTT 3623
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3624 ATTGGTCAGAGCGCAGCATGAAGGTGTGGTCAGAGGCACTGCAGGGGCTGTCCAAGAAGGAAGTATAACTCGGG 3697
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3698 GAACTCCAGCCAGCAAAATCTCAGTGGAGACCATTTCATCGTTGCGGGGCTCTATTACCCAGGGGACCCCAGCT 3771
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3772 CTGCCCCAGGCTGGAATACCAACAGAGGCTTTGGTGAAGGGACCTGTCTCCAGGATGCCTATTGAAGAAAGCAG 3845
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3846 TCCTGAGAAGGTCAGAGAGGAAGCTGCATCCAAGGGCCATGTTATCTATGAAGGCAAAAGTGGACATATCTTAT 3919
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3920 CATATGATAGTCTGATATGCCGAGCATTACCCAGGGGGAGCCCTCATTCTGACCTCAAAGAGAGGACTGTGCTG 3993
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3994 TCTGGTTCCATAATGCAGGGCACACCAAGAGCCACAGCGGAAAGCTTTGAGGACGGCCTTAAATACCCCAAACA 4067
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4068 GATAAAAAGGGAGAGCCCTCCCATCCGAGCATTTGAAGGTGCCATTACCAAAGGAAAACCATACGATGGTATCA 4141
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4142 CCACCATCAAAGAAATGGGGCGCTCCATCCATGAAATCCCACGGCAAGATATTCTAACTCAGGAAAGCCGGAAA 4215
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4216 ACTCCAGAAGTGGTCCAGAGCACGAGGCCAATAATTGAGGGTTCCATTTCCCAGGGCACACCAATAAAATTTGA 4289
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4290 CAACAACTCAGGTCAATCAGCTATCAAACACAATGTGAAGTCCTTAATCACAGGGCCTAGCAAACTACCCCGTG 4363
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4364 GAATGCTGGAAATTGTACCAGAGAACATAAAAGTAGTAGAACGGGGAAAATATGAGGATGTGAAAGCAGGCGAG 4437
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4438 CCAGTGCGAGCCCGGCACACGTCAGTGGTGAGCTCTGGCCCCTCCGTTCTCAGGTCTACACTTCACGAAGCTCC 4511
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4512 CAAAGCACAGCTGAGCCCGGGACTCTATGATGACAGCAGCGCTCGCAGGACTCCTGTGAGCTACCAGAACACCA 4585
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4586 TATCCAGAGGCTCCCCCATGATGAACAGAACTTCTGATGTTTCTTCCAGCAAGTCTGCCAGTCATGAAAGGAAA 4659
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4660 TCAACTCTGACCCCAACCCAAAGAGAAAGTATACCAGCCAAGTCTCCAGTGCCCGGGGTGGATCCCGTCGTGAG 4733
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4734 TCACAGCCCATTTGATCCTCATCACAGGAGTAGCGCTGCAGGAGAGGTTTATCGGAGCCACCTACCCACGCACT 4807
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4808 TGGATCCAGCTATGCCCTTTCACAGGGCTTTGGATCCTGCAGCTGCTGCTTACCTGTTACAGAGACAGCTTTCA 4881
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4882 CCAACCCCAGGATACCCAAGTCAGTACCAGCTCTATGCAATGGAGAATACAAGGCAGACAATCCTCAACGATTA 4955
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4956 CATTACCTCACAGCAGATGCAGGTGAATCTGCGCCCTGATGTCACCAGGGGACTGTCCCCACGAGAGCAGCCAC 5029
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5030 TGGGGCTCCCTTACCCAGCTACAAGAGGAATCATTGACCTGACCAATATGCCTCCAACAATCTTAGTGCCTCAT 5103
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5104 GCAGGGGGAACGAGCACCCCTCCCATGGACAGGATCACGTATATTCCTGGTACACAGGTTACTTTCCCTCCCAG 5177
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5178 GCCATATAACGCTGCTTCTCTGTCTCCAGGACACCCAACACACCTTGCAGCAGCTGCAAGTGCTGAGAGGGAAC 5251
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5252 GAGAGCGGGAAAGGGAGAAGGAGCGCGAACGTGAGCGCGAGCGTGAGCGTGAACGTGAACGCGAAAGGATCGCT 5325
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5326 GCTGCTCCCGCTGACCTCTACCTACGACCAGGTTCAGAACAGCCAGGCCGTCCTGGCAGCCACGGATATGTTCG 5399
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5400 CTCCCCTTCCCCTTCAGTAAGAACTCAGGAGACCATCCTGCAACAGAGACCCAGTGTTTTCCAGGGCACCAATG 5473
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5474 GAACCAGTGTAATCACACCTTTGGACCCAACTGCTCAGCTACGCATCATGCCACTGCCTTCTGGGGGCCCTTCC 5547
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5548 ATAAGTCAAGGCCTGCCAGCCTCCCGTTACAACACTGCTGCGGATGCCCTGGCTGCTCTTGTGGATGCTGCAGC 5621
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5622 TTCTGCACCCCAGATGGATGTTTCCAAAACAAAAGAGATGTCTTCTCACAGGTATGAAACGGCTAGTGATGCCA 5695
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5696 TTGAGGTGATAAGTCCCGCCAGCTCACCTGCACCACCCCAGGAAAAGCCACAGGCCTATCAGCCAGACATGGTT 5769
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5770 AAGGCAAATCAAGCAGAAAATGAGTCCACTCGACAGTATGAAGGTCCACTGCATCATTATCGGTCCCAGCAGGA 5843
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5844 ATCACCATCTCCACAGCAACAGCCACCACTGCCCCCATCTTCCCAGTCAGAGGGAATGGGACAGGTGCCCAGGA 5917
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5918 CCCATCGACTGATCACACTTGCTGACCACATCTGTCAAATTATCACACAAGATTTTGCTAGAAATCAAGTTCCC 5991
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5992 TCGCAGCCTTCTACTTCTACATTCCAAACTTCACCATCTGCTTTGTCATCCACACCTGTAAGAACTAAAACCTC 6065
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6066 AAGCCGCTACAGCCCAGAATCACAGTCTCAGACTGTCTTGCATCCCAGACCAGGTCCTAGAGTCTCTCCAGAAA 6139
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6140 ATCTTGTGGATAAATCCCGGGGAAGGCCTGGAAAATCTCCAGAGAGGAGTCATATCCCATCAGAGCCCTATGAG 6213
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6214 CCCATCTCCCCACCCCAAGGCCCTGCTGTGCATGAGAAGCAGGACAGCATGTTGCTCTTGTCACAGAGGGGAGT 6287
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6288 GGACCCTGCTGAGCAAAGGAGTGATTCTCGATCACCAGGAAGTATAAGCTACTTGCCTTCATTCTTCACCAAGC 6361
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6362 TTGAAAGCACATCACCCATGGTTAAATCAAAGAAACAGGAAATTTTTCGTAAGTTGAACTCTTCTGGTGGAGGT 6435
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6436 GACTCTGATATGGCTGCTCAGCCAGGAACAGAGATCTTCAATCTGCCAGCAGTTACCACATCAGGTGCAGTGAG 6509
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6510 CTCAAGAAGCCATTCTTTTGCTGATCCCGCCAGTAACCTTGGTCTAGAAGACATCATCAGAAAGGCTCTCATGG 6583
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6584 GAAGTTTTGATGATAAAGTTGAAGATCATGGTGTTGTCATGTCCCATCCTGTGGGCATTATGCCTGGTAGTGCC 6657
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6658 AGCACCTCAGTGGTGACGAGCAGCGAGGCACGGAGAGATGAAGGGGAGCCATCACCTCATGCAGGAGTATGCAA 6731
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6732 ACCAAAGCTGATCAACAAATCAAACAGCAGGAAGTCTAAATCTCCTATTCCTGGGCAAAGCTATTTAGGAACTG 6805
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6806 AAAGGCCTTCTTCTGTCTCCTCTGTGCATTCAGAAGGTGATTACCACAGGCAGACACCAGGATGGGCATGGGAA 6879
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6880 GATCGGCCCTCTTCAACAGGTTCTACTCAGTTCCCTTACAACCCTCTGACCATACGGATGCTCAGCAGTACACC 6953
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6954 ACCTACACAGATCGCATGCGCCCCATCTGCCATCACCCAAGCAGCTCCACATCAACAGAACCGCATCTGGGAGA 7027
Query 307 -------------------------------------------------------- 306
Sbjct 7028 GGGAGCCTGCCCCGCTCCTCTCAGCGCAGTATGAGACACTGTCTGATAGTGACGAC 7083