Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10302
- Subject:
- XR_934337.2
- Aligned Length:
- 3603
- Identities:
- 294
- Gaps:
- 3297
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAGGAGTAGCTCTGTGTCAAGCTTAGGGGACTGGAAGAGGCCGCAACCTTCCGCCTGCTGGAGGGTGGAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGATGGAGCCTGGAGCCTAGGTCACTACCTTGCTGTGGTTGGTGGTGGCGATAGAGCAGTAGGAGAGCGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGCAGGAGGACTAGAAGGAAGAGGTACTGCCACATGCTGGAGGCTGGAACCTGTGCCACCATGGCTCGCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGTGGTTGGTGGTAACGTCGGAGACTGCAGCTCAGCCACGGTGGTAGACATGTGATGGGCTGCTCCAAGCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTGAAGGAGGAGAAGGAGTTGCCGCCTGTGGTACGGTCGAGCAGATGACGTGGCTCTGCAGCTTGCCTCATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGTTGGTGTTGGAGATGGAGACCACAGCTCGACTGGAGCGGTGGTTTCCTAGAAACATGATTGTTTATTGGCG 444
Query 1 -----------------------------------ATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCATTC 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTGATCTCAGTCTGGTGAGGACTTCTTTACTGATAATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCATTC 518
Query 40 AGCACAGAACAAAGTCATTATCCTCCTCACTCTGTAAAGTATACGTTTCCCAGCACCCACCACCAGCAGGATCC 113
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 519 AGCACAGAACAAAGTCGTTATCCTCCTCACTCTGTAAAGTATACGTTTCCCAGCACCCGCCACCAGCAGGATCC 592
Query 114 AGCATTTGGAGGCAAACATGAAGCTCCATCCTCTCCAATTCTGGGGCAACCGTGTGGAGATGATCAAAATGCTT 187
|.||||||||||||||||||||||||||||||||||||||..|.||||||||||||||||||||||||||||||
Sbjct 593 AACATTTGGAGGCAAACATGAAGCTCCATCCTCTCCAATTTCGAGGCAACCGTGTGGAGATGATCAAAATGCTT 666
Query 188 CACCTTCAAAACTTTCAAAGGAAGAGTTAATAGAGTGTATGGATCGTGTAGATCGAGAAATTGCAAAAGTAGAA 261
||||||||||||||||||||||||||||||||.||.|||||||||||.||.|||||||||||||||||||||||
Sbjct 667 CACCTTCAAAACTTTCAAAGGAAGAGTTAATACAGAGTATGGATCGTATAAATCGAGAAATTGCAAAAGTAGAA 740
Query 262 CAGCAGATCCTTAAACTGAAAAAGAAACAAGTAAAAGTCTTCG----------TC------------------- 306
||||||||||||||||||||.||||||||||||||||||||.| ||
Sbjct 741 CAGCAGATCCTTAAACTGAAGAAGAAACAAGTAAAAGTCTTTGCTTATAATATTCTAAGAATGTGTGTTTTTCT 814
Query 307 -------------------------------------------------------------------------- 306
Sbjct 815 CCCTACAGAAGATATTTTTGAGTTTTCCATATTATGAAACTGTACATAAAAGGAATCATGCCTTATATATTCTG 888
Query 307 -------------------------------------------------------------------------- 306
Sbjct 889 GCTTGCTGTTTTTTGCTGCTATTGTGGTTTTCTTTCATTCATTCATTTTCCTTGCTGCACTGTCTGATCATATG 962
Query 307 -------------------------------------------------------------------------- 306
Sbjct 963 ATTGTAGAGAGTGAAATTTGTCCATTCTATTTTTGATTTTTTTTTCTATTCCATACACTGGTGCTGGTTTTTGG 1036
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1037 TTCACATGTAGAGATTTTCTAGGGCATGTGCCCAGGAATGGCAGTGCTTGGCCCAAGATTATGCACAGTGAACT 1110
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1111 ATTTAATAGATGACACCAAATTTGCTAAGAAGTAACACCATTTTACATTCCCACTGGCAACTTACGTGGGTACT 1184
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1185 GGTTTGTGCACATTCTTGCCTTTACTTGATATCATTTTTTCATTTGGATATGAAATAGTCTTCTCTGTGGTTTG 1258
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1259 GAAGGAGGCTGAGCTTATTTTCATTTGTTTATGGGTTATTTGGGTTCCTTATGTGCATTGTTCATGTCTTTTGT 1332
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1333 CTATAGTCTCCTATTTTGTCATTGAAATTTTTAGGATTCCCTGAAGTCCCTTGTCAGGTATGTGTATAGAAGAT 1406
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1407 TTGCCTAGTTTGTGGCCTGTCACTTCACTTTTAGCCCAGTATCCACTCTAAGTGTACACTAAGTGCATTTTTTT 1480
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1481 TTCCACATTTCGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAACCTCTG 1554
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1555 CCTCCCAGGTTCAAGCGATTCTCCTGCAACAGCCTCCTGAGTATCTGGGACTATAGGTGCTATAAGTGCTTTTA 1628
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1629 ATGTATTCATAAAGTTGTACAGCTATCACCACTCTCTAACTCTAGAAGATTTTTATCGTTTCAAAAAGAAACTC 1702
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1703 CATACTTACTAGCAGTTACTCCCCATTTCCCCCTTTCCCCAGCCCCTGGCAACCACTAGACTATTCTCTGTCTC 1776
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1777 TATGGACTAGCATGTGCCAAATATCAGAAAAAACAGAATCATATGTGACCTTTGGTGTTTGGCTTCATTTGTTT 1850
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1851 AGCATGTTGTCCTGATTCATCCATGTCGTATCTTGTCTCAGCACCTCATTACTTTATATGCCTGAATCCCATTG 1924
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1925 CGTGAGTATACTATGTTTTGTTTATCCATTCATTAGTTCATGGATATTGGAGTTGTGTTCATTTTTTGACTATG 1998
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1999 ATTAATAATGTACTGTGATGAGATTCATGTACTCGTTTTTGTGAGGACGTATTTTTACAATTTTCTTTATATGT 2072
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2073 CTAGGAGTGGGCATATGGTAAATCTATGTTTAAATTTTTTGAAAAACTTCAAAACTGTTTTCCAAAGTCTCTGT 2146
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2147 ACCATTTTATATTCTTACCAGCAGTGTATGGAGGTTCCATTTTTTCCTACCTCCTTGCCAACATCTGTTATTTT 2220
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2221 CCTTTTTTTTAAAAAAAATAGCTATTCTTGTAGATGTGAAGTGGTATCTAGTTGTAGTTTTCATTTGCATATCC 2294
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2295 TTAATGACTAATGATGTTGAGCATCTTTTCATGTGCTGATTGGCCATTTGTATATCTTTTTAGAGAAATGTTCA 2368
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2369 TTTAGATTGTTTGCTCATTTAATTGGGTTGTCTTTTTGTTACTCTAAGAATTCTTTATATATTCTGGACATTAG 2442
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2443 TTCTTCATCAGATGTATGACTTAATAGGTATTTTCTCTCATTCTGTGGGTTCTTTTCACTTTCCTGATAGTATC 2516
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2517 CTTTGATGTACAAAGTTTTGAATTTTGTTGAAGTCCAGTTTGTTTTTTCCTTTTGTCACTCTTGCATTTGGTGT 2590
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2591 TGTATCTAAGACCCATTGCCTAATTCACGGTCACAGATTTATACCTATGTTTTCTTCTACAAATTTTATAGTTT 2664
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2665 TACCCCTTATATTTGGGTCTTTGATCCTGATAGTGTTTTTCTGGTGAACAGAATTTGTTTAGGTTTTATATGAA 2738
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2739 AACCCACTGGGGTTATTAAGGTAGTTTTACTGTATTATTTGTAGAAGTTTTATAGTTTTGCTTCTCATCTTATT 2812
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2813 CTTAATCCACTGGAAACTACATATTGTATAGTCAGTGTTCATTTATATTTACTCAGATATTTGTCTTCTTAAGT 2886
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2887 GCTCACCATTTCTTCTCACAACTTAAGTCTTTCATCTAGGGGAACACTCTTCTACTGAAGAACATCTCTTAGAA 2960
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2961 TTTCCTTTAGTGAAGGTCTCTTAGTTAGCAAAGTCAGTATTTGTTTGGTTTTTATGACTTAAATATTGTCTTAT 3034
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3035 ATTTGGGCTGTTTATTAAAAGATATATTAATTTCATATGTGATTATTTTTTCTTAGTACATTGTCTTCTTGCTT 3108
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3109 CCATTTTTAAGACATTAGCTCTTGGTCTAAGTCCATATTCTTTCATGGATAAAGTGAATTTTCTCTCTGCTTAT 3182
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3183 TTTCAATATATTCTTTTCTTCAGGGTTCCGTTATTTTTATGATGATACATTTAGGTGGTTTTTTTTTTCCCTTT 3256
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3257 TAAATCTGTCCAACTTGAGCTTCCTGAATATGAAGGGTGGAGTTTTTCATCACTTTGGGGAAATTCCAAGCCAT 3330
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3331 TATCTTTTTTACAAAACCTTTCTAACAGTTTATTGTTCTACTTATGAAATCCTGTTAGTTGTAATATCACTCTT 3404
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3405 GTCTTCCATGTCTCTTGTTTGTTTCTTATTTTTTACTTCTTTGGGCTTCCTTCTGAGCAATTTCTTCAGCCTGT 3478
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3479 CTTCCAGTTTGCATTTTCCTTTTCAATTATATGTAATCTGCTGTCAAATCTGTCTTCAATTTCAACAATTATGT 3552
Query 307 --------------------------------------------------- 306
Sbjct 3553 TTTTATTTCTGGAATTTCTGTTTGGCTCCTTCTCAAATCTGCCTGGTCATT 3603
