Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10348
Subject:
NR_003040.2
Aligned Length:
672
Identities:
297
Gaps:
340

Alignment

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct   1  GGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAAGCCAAGGTGGGTAGATCATTTGAGGTCAGGAGT  74

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct  75  TCGAGACCAGTTTGGCCAACATGGTGACACCCTATCTCTACGAAAAATACAAAAATCAGCCCCTTTTCACAAGA  148

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct 149  TGGCACCAAAAGCTAAGAAGGAAGCTCCTGCCCCTCCTAAAGCCAAAGCAAGGCTCTGAAGGCCAAGAAGGCAG  222

Query   1  -----------------------------------------ATGTCACTCACCTTCAGGCGGCCCAAGACACTG  33
                                                    .|.|||||..|||||.||||||||||||||.||
Sbjct 223  TGTTGAAAGGTGTCCACAGCCACAAAAAAAAGAAGATCCGCGTATCACTAGCCTTCTGGCGGCCCAAGACATTG  296

Query  34  CGACTCCGGAGGCAGCCCAGATATCCTCGGAAGAGCACCCCCAGGAGAAACAAGCTTGGCCACTATGCTATCAT  107
           |||||||||||||||..||.|||||.|   ||||||||||||||||||||||||||||.||||||||| |||||
Sbjct 297  CGACTCCGGAGGCAGTGCAAATATCTT---AAGAGCACCCCCAGGAGAAACAAGCTTGACCACTATGC-ATCAT  366

Query 108  CAAGTTTCCGCTGGCCACTGAGTCGGCCGTGAAGAAGATAGAAGAAAACAACACG--CTTGTGTTCACTGTGGA  179
           |||||||||.|||.|||||||||| .||.|||||||||.||||||    .|||||  |||||||||||||||.|
Sbjct 367  CAAGTTTCCTCTGACCACTGAGTC-TCCATGAAGAAGACAGAAGA----CACACGCACTTGTGTTCACTGTGAA  435

Query 180  TGTTAAAGCCAACAAGCACCAGATCAGACAGGCTGTGAAGAAGCTCTATGACAGTGATGTGGCCAAGGTCACCA  253
           |||| ||||||  .||||||||                |||||||||||||||.|||||||||||||||||.||
Sbjct 436  TGTT-AAGCCA--CAGCACCAG----------------AGAAGCTCTATGACACTGATGTGGCCAAGGTCAACA  490

Query 254  CCCTGATTTGTCCTGATAAGGAGAACAAGGCATATGTTCGACTTGCTCCTGATTATGATGCTTTCGATGTTG-T  326
           ||||||||.|.||||||  |||| |.||||.|.||||||||||.|||||||||||..|||||||.||||||| .
Sbjct 491  CCCTGATTCGGCCTGAT--GGAG-AGAAGGAACATGTTCGACTGGCTCCTGATTACAATGCTTTGGATGTTGCC  561

Query 327  AACAAAATTGGGATCACCTAAACTGAGTCCAGCTGGC-------------------------------------  363
           ||||||||.|||||||.||.||||||||||||.||||                                     
Sbjct 562  AACAAAATAGGGATCATCTCAACTGAGTCCAGTTGGCTAATTCTAAATATATGTATATCTTTTCACCATTAAAA  635

Query 364  ------  363
                 
Sbjct 636  AAAAAA  641