Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10348
- Subject:
- NR_003572.2
- Aligned Length:
- 5815
- Identities:
- 343
- Gaps:
- 5456
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAGGCGGGGCCGGGCCGGGGCGGGGTCTCGGGCAGGGGCGGGGAGCTTACCGACCTCCCGCCCCCGCTGCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTTTCTGGCCCTGCCAGTGTCTCCGCCGGTTGAAAGCGCGTGTCTGCGTCGGGTTCTGTTGGAGTGCGTTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGCCGTGGGTCCGCGCTGCTTCCACCCAACTTCCTGTTAGAGTTTCTCTCCTGTCACAATGGCATGGTCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCACTGCGACCTCTGCTTCCTGGGTTCAAGGATTCTCCTGCCTCAGTCTCCCAAGTAGCTGGGATTACAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCACCCGAGGACGGGTCACCATGGCTTTGGAGCACCTGGTAGTGTGGCATGTCCACAGTGAAGACCAGAGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTTGTCCTTAAGACTGACCTGGGGAGACGTGGCTGCAGGCCATTGAGGAAGACGGCACCGAAAGCGAAGGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCCTGCTCCTCCTAAAGCCGAAGCCAAAGTGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCGC 518
Query 1 --------------------------ATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTCCGGAGGCAG 48
||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 519 AGCCACACGCAAAAAAGAAGATCCGCATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTTCGGAGGCAG 592
Query 49 CCCAGATATCCTCGGAAGAGCACCCCCAGGAGAAACAAGCTTGGCCACTATGCTATCATCAAGTTTCCGCTGGC 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||.|
Sbjct 593 CCCAGATATCCTCGGAAGAGCACCCCCAGGAGAAACAAGCTTGGCCACTATGCT---ATCAAGTTTCCGCTGAC 663
Query 123 CACTGAGTCGGCCGTGAAGAAGATAGAAGAAAACAACACGCTTGTGTTCACTGTGGATGTTAAAGCCAACAAGC 196
||||||||.||||| |||||||||||||||||.|||||.||||||||||...||||||||||||||||||||||
Sbjct 664 CACTGAGTGGGCCG-GAAGAAGATAGAAGAAAGCAACATGCTTGTGTTCTTCGTGGATGTTAAAGCCAACAAGC 736
Query 197 ACCAGATCAGACAGGCTGTGAAGAAGCTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTGTCCTGAT 270
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 737 ACCAGATCAGACAGGCTGTGAAGAAGGTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTTTCCTGAT 810
Query 271 AAGGAGAACAAGGC--ATATGTTCGACTTGCTCCTGATTATGATGCTTTCGATGTTGTAACAAAATTGGGATCA 342
||.||||||||||| ||||||||||||.||||||||||||||.|||||.|||||||.||||||||||||||||
Sbjct 811 AAAGAGAACAAGGCATATATGTTCGACTGGCTCCTGATTATGAAGCTTTGGATGTTGCAACAAAATTGGGATCA 884
Query 343 CCTAAACTGAGTCCAGCTGGC----------------------------------------------------- 363
.||||||||||||||||||||
Sbjct 885 TCTAAACTGAGTCCAGCTGGCTAACTCTAAATACATGTGTATCTTTTCACCATAAAAGAATAATGTTTTTCATA 958
Query 364 -------------------------------------------------------------------------- 363
Sbjct 959 AGAGTGACAACTTAATTAGAATCAAATCTATAAGCTTTAAGATTTTACATTTCTGTAAGTATAATATTAGCTTA 1032
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1033 TTTGACTAGAACTCAAGCAGAATAGGAATTTATGTTTGTTTTATATTCAAGTGATAACTTTGAAGACATAGTTT 1106
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1107 TATTACACCAAAAATTTTATATTAATCTCATTTAAGTAAGTTTTATCCAAATCATGTTAACTTAAAAAACATTT 1180
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1181 GATCAGTTCCTATATTTCTAGGAGTTTGGTGAATATTTATTTATAAATGGTTATTTTTTTCCAAGCCAAGTTAG 1254
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1255 AATAGAGCACTTTTATAGGATTTTATAAATGAATTTTGCAGTGCTATCCGGAGTTAAGAAAATATCACATATAC 1328
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1329 ATTACATACAGTAATAGATATACAAACACAAATAGAGATTTCATAGCTTTCATCCTGAAATTTCAGCCATGAAT 1402
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1403 CAGGCATAAATATTCTGATGGTTAATTTTAGACATCTACTTGATTGGATTAAGAAACATACATAGCTGGTCAAA 1476
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1477 CAATTTCAGCCATGAAACAGGCATAAATATTCTGATGGTTAATTTTAGACATCTACTTGACTGGATTGAGAGAC 1550
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1551 ACACGTAGCTGGTGAAACACAATTTCTGGGCATATCTGTGAAGGTGTTTCTGGAAGACACTGAGATAACCCTGA 1624
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1625 CCCAGTGTGGATGGGCACTGATATGGTTTGCCTGTGTCCCCACCCAGATCTCATCTTGAATTGTAGTTCCTATA 1698
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1699 ATCCGTACATGTCGTGGGAGGGACCCAGTGGGAGGTGATTGAATCATGGTGGTTGTTACTGCCATTCTGTTTTC 1772
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1773 ATGGCAGTGAGTGAGTTCTCATGATCCAATGGTTTCATAAGGGGCTGTTCCCCTTTGGCTCAGCACTTCTTCTT 1846
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1847 GTTGCTGCCATGTGAAGAAGGACGTCTTTGTTTCCCCTTCTGCCATGATTGTGAGGCCTCTGCAGCCACGTGGA 1920
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1921 ACTGTCAGCCCATTTAACCTCTTTGTTCTTTATAAATTGCTCAGACTCAGGTATTTCTTCACAGCTGTATAAAA 1994
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1995 ATGGATGAATACAGGCACCATCCAATTGGTTGAGAGCCCAGATAGAATAACAAGGAAGAGGAAAGGTGAATTAT 2068
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2069 CTCCTGAAATTGAAACATCCTTCTTCTCCTGCCCTTGACATCAGAATCAGTGTCTCAGAGCTTTGGCCTCAGAA 2142
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2143 TCAGAGTTACACCATTGGCTTCCCTGATTCTGAGTCCTTTATATCTGGAGTGAGTCATGCTGCCAGCTTTCCTG 2216
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2217 GTTCTCCAACTTGGAGACAGGCTATTGTGTAACTTCTCAGCCTCCATAATTATGTGAACCAATTCCCCTAATGA 2290
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2291 GTCTTCTCTCATCTATCTACATATATCCTATTGATTCTGCCTTTCTGGAGAACCCTGACTAATGTTATTACAAT 2364
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2365 AATACAAAATTCACTAGTTTATATAGAAGACTTGGTTTTTGTCTTTGCCCCATTTTGTATTTGTATTATAACTG 2438
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2439 TGTATCTGGAAAATGGAACAAGTTTTTATCTTCTTCATATGAGGGCCAAAGCTTTTTTCTCACCAATATTTTTG 2512
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2513 GAGATTTTTAAGATTTTCTTTTGTTTGGACATACAATCTTATGGAGGCTGAGAAATAAAATTTTTTCTATTTTA 2586
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2587 TTTTTCAGCCCCAGATGTTTGCTTTTGCAGATTCTTGAGCACATTGAGAGCATGGAGAGCACTCCAAGGCATGG 2660
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2661 AGTGGGGTGCCTAAAGTTTCAGTGATTACAGGGAGTTGAGAGACTCAACTGGGAAAGGAAAAGTCTAAAAGGAG 2734
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2735 GCAATTTGGAAGATAAAAATTTTCTCAAAGGAGCGATTAAATTTCTAAATAATTCTTAGTAAAATCATGTAAAC 2808
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2809 AGGAAAGGAAATAGAATTAGTTCCATATTGGTGGAACACATAGCAGAGGTTTGAGAAGGGAGAATTTAGTCAAC 2882
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2883 TGAGAAGTTCTCATGAAAGGAGCAAGTTCAAGATCACAGAGACACCTTGAAACAAAAAGCCAGGAATAACTTCC 2956
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2957 AACCCAAGAGGAGAACAGAGAGGCCTCAAAACCAAAGCTAGGATAAGAAACTTGTAGCCCAAGAGTTATCTTCC 3030
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3031 AGACAAAGAAGCCTGAGATTCCAACGCAGCTTCAGAGAGTGCTCACTCAAAATGTTACTGAAACTGAAGGCTTT 3104
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3105 TTAATGACTTAGCCATGCCTGCAAAAGGCATTCCCTAAGGTGGCACAGAAGACGGAGCCCCCATATCCAAAGAT 3178
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3179 AGCCAAGGAGAAAGAAAGACCCCTGTTGCCAGAGCCAGTGGGCAAAGGCAACAGAAAAGGAGACAAGGGTCCTA 3252
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3253 ATGGGATGAGATCCTTTCGGATTTAGGCTTTTATACAAACTCCTGAGAACTGGCGGGTTGACAGCCATAAATGG 3326
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3327 GGTACCAAACTTTCTACTCATTGGATTACAAGTTCTCAGGCATCCAGAATGATGAACAAAATGACAATTTCTAG 3400
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3401 GGCTTCTGTGGGAGAGTATGGAAAGGTCTTTTTGAACCTTTTAATGCTGTCAACGGAAGAATGATGAGGTTCAT 3474
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3475 AAATTTGGAAAGGAGACATTTCTTCATTTTTATGTTTATTTTTATTTTTTTTGAGACAGAGTTTCACTCTTGTT 3548
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3549 GCCCAGGCTGGAGTGCAATGGCGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTG 3622
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3623 CCTCAGCCTCCTGATTAGCTGGGATTACAGATGCCCACCACCACACCTGGCTAATTTTTTGCAGTTTTAGTAGA 3696
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3697 GACAGGGTTTCATCATGTTGGCCAGGCTGGTCTGAAACTCATGAGCTCAGGTGATCCACTTGCCTTAGCCTCCC 3770
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3771 AAAGTGCTGGGATTGCAGGCATGAGCCACCCAACCAGTGAGAGATTTATTTCCTATAAAGGGTTGTAGCCTGCA 3844
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3845 GGGTTGTCCTTCTGACAGGCTGGGAAGCATAGCCTCCAGCCAGAAGCCAGAAACAGACTCTTCAAGGAGGAGGT 3918
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3919 AAAGGAAATAGCAATTTATGCTGACTGGAATGGCCAAATACATTTATTTAATAAGCTCCAGGAGGAGTCATGAA 3992
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3993 TATTTATGGAAGGAGAAATGCATGCATGCACAATTGAGTTTCTGGCTTCTTCATGGGTCCCATGTACAAAAAAT 4066
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4067 GGCAGTGTTAGCATGATCCCAGGGTGGAGTTTTCAGCCCTCTGACATTAAAAGGTGAAGCAGAGGACATGAAAA 4140
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4141 CTCGCTCTGTGCATCCTCTGTACGCTGGCCAGAACCTCTCTGTTGTGGGTGGTCTCTTATCAGGCAAGAAAGGA 4214
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4215 GAGGTTGATATCGGTAGTGGAGGCTTTGAAAGGGCTGGTTTCTGTTAAATCCTTAGGGAAGAAAGCCTCATCAT 4288
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4289 GGTTAGCAAAGGAGTGGGTTTAACGATGTGTATGTTAACCCCATCATCCCATCCTAGCAAAGCTGAGAACTCAG 4362
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4363 TTTTGAAAGTTACTCTGTGGTCCCCTCAGCCAAGAGTGGTTCTGTTCAGTCAGTTGGGAGCTTATAATTTAATT 4436
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4437 TTTGTTTATCAATGCTAATGCGAAAGAGTACGCTGTCTTCATGGCAGCTGAATTTGCAAGAAACTCCTTGGATG 4510
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4511 GGGTTAATGGCAGCTGTATTTTTCTGGGAGCTCTGCTTTAATTGGACAAAGTAAGTTGTGGTAAGATTTCTTCT 4584
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4585 TTTATCTTCAGTATCTCAAATGTTTTCATTTAAATAATCTTTATAACAACTTTTGATGTCTGAGTGGATTCCCA 4658
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4659 TACAGTCATCTATTGTAAGACTTTCTGATTCCGTTTTTTTCCTTTGGTCATTATGAATAGGGCTTATGTAAATA 4732
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4733 ATTGCATGGTAGCTTTTGATTGGAAATAACATCAAAGTAGTTGTCAAAATACTTAGGAATGTTATTTTTGGATT 4806
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4807 GTAAGGTGAGACTTGTTTAGCTTTGGAAAAAAATGCCCAACTTGTAATAGGGGAGGAAAAATAATTTTCTGTTT 4880
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4881 TCGGAATTCTTAGATGGGATGCTCTGTAAAAACTGACAGATTAAAATGAGAAAAACAGAAAAGTTGAAAAACAC 4954
Query 364 -------------------------------------------------------------------------- 363
Sbjct 4955 GTATACCTTATGGTTACATGGGAGATATTCAGGGAAAAATGAGTAAATCTCCAACAGGTGGCTTTCAATTCAAG 5028
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5029 CATAAATACTGTCTTCAACTTAAAGAAAGAAGATTTGAGGTGCAGTATTGGGGAGTTAACCAGCAAAAGCACAT 5102
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5103 TAGACAAGGGTAAGGTTCATTATACAGACTTAAGTCCATGCATTCTCCATTGATAAGACTCTTTAGTGATTTAG 5176
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5177 TTATCCTTCTCTTCTTGGTGTCGAGAGAGGTAGCTTTTAAATGGTGATTTCCTTTATAGATGTAAATTTTCCTT 5250
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5251 ACACAAGTGTAACTTCTCTGTTTTCACAACTTCCTTTGTTAGCATTTTTTTTTTTCAAAATAATTAGCTTGGAA 5324
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5325 TAATTCTTAAGCCAAAGGGACATATTTTGGGGTTGCATATTCTGGTTTCCTACCATTATATTTTGGGGTGGCAT 5398
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5399 ATTTTGGTCTTATACACTGTGTTCCACCGGCAATGAAAAGAGTTCTTGTTTTTCCTCCAGCAATTTGTCATTTG 5472
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5473 TTAAAGAGTTTAGCAGTTCTAAGAGATATAGACCAGCTGTGCTATCTTTTTGTGGTTTTCAGTTCTCTAGTATG 5546
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5547 TTGAGCATCTTTTTGTAAGTGTACTTGCCATCTGTAGATCTTCTTTGGTGAGGCGTCTGTTCAGATCTGTGTGC 5620
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5621 ATTTTTAATTGGGCTGTTTAACTTATTGTTTAGTTTTAACAATTTTTTATGTATTTTGAATACAAATTCTCAGA 5694
Query 364 -------------------------------------------------------------------------- 363
Sbjct 5695 TCTGTATTTTGCAAATATTTTCTTCAATATGTGGCTTGTCTTTTGGTTCTCTTAACAAGGTCTCTTCCAGAGTA 5768
Query 364 ------------------------------------------- 363
Sbjct 5769 TAAACTGTAAATATTAAGAAAAAAAAAAAAAAAAAAAAAAAAA 5811
