Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10348
Subject:
NR_024528.1
Aligned Length:
1482
Identities:
357
Gaps:
1119

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGGGAGTGCGCATGCGGCCGAGTGCGGGACTGGGGCTCCTGGCTGTGGGTGTGGTACTGAGGCTTCAGCGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCCGCCCGCCTAGAGGGAGTGGAGCGGTGAGCACGTCAGGGGTGGGGGGCGCAGGTCAAGCTTTCACCAGTTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTAATTCTTTGATGGGGTAAATTTGAGCAATTTTCTCGACTTGTCGACATTCGTTATTAACTGAGCAGGAATCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGAGAGGAACCCGGTCCTCTCCACACAGCCCAGCAGGGAGACAGGAGACATCAATATATGTAAGATGAACGTTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTTCCCTCGGGAAAGGCGGGACAACTCGAAGCAGGGAGGGGGCTTCCAGGTCACAGAGAGCCTACGACTAGATT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGCATCTTTACGTCCTGCGCGGAGGCTGCTACACACATGCAGAAGTCATGCTGGTGGCCTGGACATTGAAGGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAGAAGTGGATTTGGGAGACATTTAGGAGATGGCACCGAAAGCGAAGGAAGCTCCTGCTCCTCCTAAAGCCGAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCAAAGCGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCGCAGCCACACGCAAAAAAGAGGATC  592

Query    1  ---ATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTCCGGAGGCAGCCCAGATATCCTCGGAAGAGCAC  71
               |||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||||.|||||||||
Sbjct  593  CGCATGTCACTCACCTTCAGGCGGCCCAAGACACTGTGACTCCGGAGGCAGCCCAGATAGCCTCAGAAGAGCAC  666

Query   72  CCCCAGGAGAAACAAGCTTGGCCACTATGCTATCATCAAGTTTCCGCTGGCCACTGAGTCGGCCGTGAAGAAGA  145
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  667  CCCCAGGAGAAACAAGCTTGGCCACTATGCTATCATCAAGTTTCCGCTGACCACTGAGTCGGCCGTGAAGAAGA  740

Query  146  TAGAAGAAAACAACACGCTTGTGTTCACTGTGGATGTTAAAGCCAACAAGCACCAGATCAGACAGGCTGTGAAG  219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TAGAAGAAAACAACACGCTTGTGTTCACTGTGGATGTTAAAGCCAACAAGCACCAGATCAGACAGGCTGTGAAG  814

Query  220  AAGCTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTGTCCTGATAAGGAGAACAAGGCATATGTTCG  293
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||
Sbjct  815  AAGCTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTGTCCTGATAAAGAGAAGAAGGCATATGTTCG  888

Query  294  ACTTGCTCCTGATTATGATGCTTTCGATGTTGTAACAAAATTGGGATCACCTAAACTGAGTCCAGCTGGC----  363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  889  ACTTGCTCCTGATTATGATGCTTTCGATGTTGTAACAAAATTGGGATCACCTAAACTGAGTCCAGCTGGCTAAC  962

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct  963  TCTAAATATATGTGTATCTTTTCAGCATAAAAAAATAATGTTTTTCATAAGAATGACAACTTAATTAGAATCAA  1036

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct 1037  ATCTATAAGCTTTAAGATTTTACGTTTCTAGTAAGTATAATATTAGCTTATTTGACTAGAACTCAAGCAGAATA  1110

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct 1111  GGAATTTATGCTTGTTTTATATTCAATAATGATAATTTTGAAGATATAGTTGTTTTATTACACCAAAAATACTA  1184

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct 1185  TATTAATCTTATTTAACTAAGTTTTATCCAAATCATGTTAACTTAAGAAACATTTGATCAGTTCCTATATTTCT  1258

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct 1259  AGGAGTTTGGTGAATATTTATTTATAAATGCTTATTTTTTTCCAAGCCAAGTTAGAATAGAGCACTTTTAGAGG  1332

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct 1333  ATTTCATAAATGAATTTTGCAATGCTCTCTGGAGTTAAGAAAATATCACATATACATAACATACATTATTAGAT  1406

Query  364  --------------------------------------------------------------------------  363
                                                                                      
Sbjct 1407  ACACAAACACAAATAGAGATTTCATAGCTTTCATCCTGAAATTTCAGCCATGAATCAGGCATAAATATTCTGAT  1480

Query  364  --  363
              
Sbjct 1481  GG  1482