Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10447
- Subject:
- XM_017018220.1
- Aligned Length:
- 1614
- Identities:
- 849
- Gaps:
- 691
Alignment
Query 1 ATGAGTCTGCTAAACTGTGAAAACAGCTGTGGATTCAGCCAGTCTGAAAGTGACTGCTGTGTGGCCATGGCCAG 74
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGTCTGCTAAACTGTGAAAACAGCTGTGGATCCAGCCAGTCTGAAAGTGACTGCTGTGTGGCCATGGCCAG 74
Query 75 CTCCTGTAGCGCTGTAACAAAAGATGATAGTGTGGGTGGAACTGCCAGCACGGGGAACCTCTCCAGCTCATTTA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCCTGTAGCGCTGTAACAAAAGATGATAGTGTGGGTGGAACTGCCAGCACGGGGAACCTCTCCAGCTCATTTA 148
Query 149 TGGAGGAGATCCAGGGATATGATGTAGAGTTTGACCCACCCCTGGAAAGCAAGTATGAATGCCCCATCTGCTTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGGAGATCCAGGGATATGATGTAGAGTTTGACCCACCCCTGGAAAGCAAGTATGAATGCCCCATCTGCTTG 222
Query 223 ATGGCATTACGAGAAGCAGTGCAAACGCCATGCGGCCATAGGTTCTGCAAAGCCTGCATCATAAAATCAATAAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATGGCATTACGAGAAGCAGTGCAAACGCCATGCGGCCATAGGTTCTGCAAAGCCTGCATCATAAAATCAATAAG 296
Query 297 GGATGCAGGTCACAAATGTCCAGTTGACAATGAAATACTGCTGGAAAATCAACTATTTCCAGACAATTTTGCAA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGATGCAGGTCACAAATGTCCAGTTGACAATGAAATACTGCTGGAAAATCAACTATTTCCAGACAATTTTGCAA 370
Query 371 AACGTGAGATTCTTTCTCTGATGGTGAAATGTCCAAATGAAGGTTGTTTGCACAAGATGGAACTGAGACATCTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AACGTGAGATTCTTTCTCTGATGGTGAAATGTCCAAATGAAGGTTGTTTGCACAAGATGGAACTGAGACATCTT 444
Query 445 GAGGATCATCAAGCACATTGTGAGTTTGCTCTTATGGATTGTCCCCAATGCCAGCGTCCCTTCCAAAAATTCCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGGATCATCAAGCACATTGTGAGTTTGCTCTTATGGATTGTCCCCAATGCCAGCGTCCCTTCCAAAAATTCCA 518
Query 519 TATTAATATTCACATTCTGAAGGATTGTCCAAGGAGACAGGTTTCTTGTGACAACTGTGCTGCATCAATGGCAT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATTAATATTCACATTCTGAAGGATTGTCCAAGGAGACAGGTTTCTTGTGACAACTGTGCTGCATCAATGGCAT 592
Query 593 TTGAAGATAAAGAGA--TCCA-------TGACCAGAACT---GTCCTTTGGCA-AATGTCATCTGTGAATACTG 653
||||||||||||||| |.|| ||.|||| .|| ||.|..||||| .||.|||.||
Sbjct 593 TTGAAGATAAAGAGAGTTTCACTCTTGTTGCCCAG-GCTGGAGTGCAATGGCATGATCTCAGCT---------- 655
Query 654 CAATACTATACTCATCAGAGAACAGATGCCT---------AATC-ATTATGATCTAGACTGCCCTACAGCCCCA 717
||..|| |..|||| |||| ||.| |||.| .||||| .|||||
Sbjct 656 CACCAC-AACCTCA-------------GCCTCCTGGGTTCAAGCGATTCT-------CCTGCC--TCAGCC--- 703
Query 718 ATTCCATGCACATTCAGTA-CTTTTGGTTGCCATGAAAAGATGCAGAGGAATCACTTGGCAC--GCCACCTACA 788
||| |.|||| || ||.||.|| .||||| |||||
Sbjct 704 --TCC--------TGAGTAGCT-------------------------GGGATTAC-AGGCACGTGCCAC----- 736
Query 789 AGAGAACACCCAGTCACACATGAGAATGTTGGCCCAGGC-----TGTTCATAGTTTGAGCGTTATACCCGACTC 857
|||| ||.||| |.||..||.|||.|| ||.| |||
Sbjct 737 ------------------CATG-----------CCCGGCTAATATTTTTGTATTTTTAG---TAGA---GAC-- 773
Query 858 TGGGTATATCTCAGAGGTCCGGAATTTCCAGGAAACTATTCACCA-GTTAG--AGGGTCGCCTTGTAAGACAAG 928
||||| |||.||| |||.| |||.|.|.||.| ||..|..|
Sbjct 774 -------------GAGGT--------------------TTCTCCATGTTGGTCAGGCTGGTCTCG-AACTCCCG 813
Query 929 ACCATCA---AATCCGGGAGC---TGACTGCTAAAATGGAAACTCAGAGTATGTATGTAAGTGAGCTCAAACGA 996
||| ||| ||||||...|| .|.||.|.|||.|| ||..||.|| .|| || ||||
Sbjct 814 ACC-TCAGGTAATCCGCCCGCCTTGGCCTCCCAAAGTG----CTGGGATTA-------CAG---GC----ACGA 868
Query 997 ACCATTCGAACCCTTG--AGGACAAAGTTGCTGAAATCGAAGCACAGCAGTGCAATGGAATTTATATTTGGAAG 1068
.|||| |.|| |||.|||| |.|||||.|||..||.
Sbjct 869 GCCAT-------CATGCCAGGCCAAA--------------------------------AGTTTATCTTTTAAAA 903
Query 1069 ATTGGCAACTTTGGAATGCATTTGAAATG--TCAAGA--AGAGGAGAAACCTGTTGTGATTCATAGCCCTGGAT 1138
| |.|||||.|.|.|||.| ||..| |||.|| |.|||| |.|||.|.|| ||
Sbjct 904 A---GAAACTTGGTAGTGCCT---AACAGCATCATGATTATAGGA-----CAGTTTTTAT------------AT 954
Query 1139 TCTACACTGGCAAACCCGGGTACAAACTG---TGCATGCGCTTGCACCTTCAGTTACCGACTGCTCAGCGCTGT 1209
|| |.|||||| |..||
Sbjct 955 TC-------------------AGAAACTGAGATAGAT------------------------------------- 972
Query 1210 GCAAACTATATATCCCTTTTTGTCCACACAATGCAAGGAGAATATGACAGCCACCTCCCTTGGCCCTTCCAGGG 1283
Sbjct 973 -------------------------------------------------------------------------- 972
Query 1284 TACAATACGCCTTACAATTCTTGATCAGTCTGAAGCACCTGTAAGGCAAAACCACGAAGAGATAATGGATGCCA 1357
Sbjct 973 -------------------------------------------------------------------------- 972
Query 1358 AACCAGAGCTGCTTGCTTTCCAGCGACCCACAATCCCACGGAACCCAAAAGGTTTTGGCTATGTAACTTTTATG 1431
Sbjct 973 -------------------------------------------------------------------------- 972
Query 1432 CATCTGGAAGCCCTAAGACAAAGAACTTTCATTAAGGATGACACATTATTAGTGCGCTGTGAGGTCTCCACCCG 1505
Sbjct 973 -------------------------------------------------------------------------- 972
Query 1506 CTTTGACATGGGTAGCCTTCGGAGGGAGGGTTTTCAGCCACGAAGTACTGATGCAGGGTA 1565
Sbjct 973 ------------------------------------------------------------ 972