Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10614
- Subject:
- XM_005272422.3
- Aligned Length:
- 1749
- Identities:
- 363
- Gaps:
- 1371
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGCATACCAGGAATTGGTTACCGTGGCAACCATGTTCTTCCAGTACTTATTGCAGCCATTTAGGGCTATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGAAGTTGCAACTTTATAAGTCTTTGGATGAGGATGACCTAGGTCCTAGAAGGGTAGTTGCCCTGGAGAAAG 148
Query 1 --------------------------------------------AT---GGA-AGCA-AGTGTGCCAAAATA-- 23
|| ||| |.|| |||| ||.||
Sbjct 149 AAGCTGAAGAATGGACCAGACGGGCTGAAGAAGCTGTCGTCTCTATTCAGGATATCACAGTG-----AATTATT 217
Query 24 -TAAG----------AAGCACTTGCCTCAACTAGGAATGCAGAAAGAAATGGAACAGGATGTGAAGAGATTTGG 86
|||| |||||.|.|| |||||||||||||||||||||||||||||.||||||||||||
Sbjct 218 TTAAGGAGACAGTAAAAGCATTAGC-------AGGAATGCAGAAAGAAATGGAACAGGATGCGAAGAGATTTGG 284
Query 87 CCAGGCTGCCTGGGCCACAGCAATTCCCAGGTTGGAAAAACTTAAGCTAATGCTAGCTCAAGAGACTCTGCAAC 160
.||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||.||||||||||||||
Sbjct 285 TCAGGCTGCCTGGGCCACAGCAATTCCCAGGTTGGAAAAACTTCAGCTAATGCTAGCTCGAGAGACTCTGCAAC 358
Query 161 TCATGAGAGCGAAAGAGTTATGTTTAAATCACAAAAGAGCTGAAATTCAGGGAAAGATGGAAGATCTTCCAGAA 234
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 TCATGAGAGCGAAAGAGTTGTGTTTAAATCACAAAAGAGCTGAAATTCAGGGAAAGATGGAAGATCTTCCAGAA 432
Query 235 CAAGAAAAAAATATAAATGTTGTAGATGAATTAGCAATACAATTTTATGAAATTCAGTTAGAACTATATGAAGT 308
|||||||||||||.||||||||||||||||||||.|||||||||||||||||||||.|||||||||||||||||
Sbjct 433 CAAGAAAAAAATACAAATGTTGTAGATGAATTAGAAATACAATTTTATGAAATTCAATTAGAACTATATGAAGT 506
Query 309 TAAATTTGAGATATTAAAAAACAAAGAAATACTGCTTACTACACAGTTGGACTCTCTTGAAAGACTTATAA--- 379
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 507 TAAATTTGAGATATTAAAAAACGAAGAAATACTGCTTACTACACAGTTGGACTCTCTTAAAAGACTTATAAAAG 580
Query 380 ------AAGATGAAATT--------------------------------------------------------- 390
||||||||.||
Sbjct 581 AAAAACAAGATGAAGTTGTCTATTACGATCCATGTGAAAATCCAGAGGAACTTAAAGTCATTGACTGTGTGGTG 654
Query 391 -------------------------------------------------------------------------- 390
Sbjct 655 GGGCTGCAGGATGATAAGAATTTGGAAGTGAAAGAACTCAGAAGGCAGTGCCAGCAGCTGGAGTCTAAACGGGG 728
Query 391 -------------------------------------------------------------------------- 390
Sbjct 729 CAGGATCTGTGCCAAAAGAGCCTCTCTCCGGAGTAGAAAGGATCAGTGCAAAGAAAATCATCGGTTCAGATTGC 802
Query 391 -------------------------------------------------------------------------- 390
Sbjct 803 AACAGGCTGAAGAAAGCATAAGATACTCTCGTCAGCATCACAGTATTCAGATGAAAAGAGACAAGATAAAAGAA 876
Query 391 -------------------------------------------------------------------------- 390
Sbjct 877 GAGGAGCAAAAGAAAAAAGAATGGATCAACCAAGAACGTCAAAAAACACTCCAACGATTGAGATCATTTAAAGA 950
Query 391 -------------------------------------------------------------------------- 390
Sbjct 951 TAAACGCCTAGCTCAATCTGTCCGAAACACCTCTGGCTCAGAACCTGTGGCTCCAAACCTGCCAAGTGATCTTT 1024
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1025 CCCAGCAGATGTGCTTGCCAGCTTCCCACGCGGTGTCAGTAATTCACCCGTCCTCTAGGAAAACTAGAGGTGTT 1098
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1099 CCCCTATCGGAAGCTGGTAATGTGAAAAGCCCCAAGTGTCAAAACTGTCATGGAAATATCCCTGTCCAGGTTTT 1172
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1173 TGTTCCAGTTGGTGATCAAACACATTCCAAATCCAGTGAGGAATTGTCACTGCCACCACCTCCTCCTCCTCCAC 1246
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1247 CACCACCACCGCCGCCACCGCCGCCCCCACCCCCTCCTCTCCGTGCTCTGTCCTCATCCTCTCAAGCTGCAACT 1320
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1321 CATCAGAACTTAGGCTTCCGGGCTCCAGTGAAAGATGACCAGCCACGTCCTCTAGTGTGCGAATCACCTGCTGA 1394
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1395 GCGACCACGTGACTCCTTGGAAAGTTTTTCATGTCCAGGATCTATGGATGAAGTGTTGGCCTCCTTAAGGCATG 1468
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1469 GCAGAGCTCCTCTCCGGAAGGTGGAAGTGCCGGCGGTGCGCCCTCCCCACGCCTCAATCAATGAGCACATTCTG 1542
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1543 GCTGCCATAAGGCAAGGGGTCAAACTGAAGAAAGTTCACCCTGATCTTGGCCCAAACCCCAGCAGCAAACCAAC 1616
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1617 CAGCAACAGACGCACCAGTGACCTTGAGAGGAGCATCAAGGCTGCGCTCCAGAGAATCAAGAGGGTGTCTGCTG 1690
Query 391 ----------------------------------------------- 390
Sbjct 1691 ACTCTGAGGAGGACAGTGATGAGCAGGACCCTGGCCAGTGGGATGGT 1737
