Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10619
- Subject:
- XR_001744751.2
- Aligned Length:
- 2195
- Identities:
- 200
- Gaps:
- 1977
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTACCAGACAAGAAGACAAGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCTGGCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGCTGTGGGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGAATCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTCCCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGAC 1258
Query 1 --------------------------ATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACG 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACG 1332
Query 49 AGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTC 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTC 1406
Query 123 GCACG---------GTGAGTTGCCAGG-TG-----------TGGCCCGTAATCGGAGC---------------- 159
||||| .|||| .||||| || ||| |||..|||
Sbjct 1407 GCACGAGGCTCGCTCTGAG--CCCAGGCTGGAGTTCAGTGATGG------ATCTCAGCTCACTGCAGCCGCCAC 1472
Query 160 -------GCACAAAACAT------------------------GATGGG-----ACACGTAACGGGACCACACAG 197
||.|||.|.|| |.|||| |.|||| |.||||| ||
Sbjct 1473 CTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGT----GCACCAC-CA- 1540
Query 198 GGCACATTGGGC---------------------ACTTGCAGG---------------------GGCGCGAGG-- 227
|||.|| || |.||||.|| .|| |.|||
Sbjct 1541 GGCCCA----GCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGC-CTAGGCT 1609
Query 228 -------------TGGCGGCACG--------------------------------------------------- 237
||||..||.|
Sbjct 1610 GGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTA 1683
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1684 CAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCA 1757
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1758 CAGCAGTATATTATGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCC 1831
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1832 AGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAA 1905
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1906 ACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAG 1979
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1980 GCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGC 2053
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2054 CTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGA 2127
Query 238 ------------------------------------------------- 237
Sbjct 2128 ATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA 2176
