Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10619
- Subject:
- XR_002956438.1
- Aligned Length:
- 2166
- Identities:
- 200
- Gaps:
- 1948
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGAGTGCGATGACATGGATCCTGCGGACAAACCGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCG 1184
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 1185 TGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATG 1258
Query 4 CCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCG 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCG 1332
Query 78 CCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACG---------GTGAGTTGCCAGG-T 141
|||||||||||||||||||||||||||||||||||||||||||||||||| .|||| .||||| |
Sbjct 1333 CCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAG--CCCAGGCT 1404
Query 142 G-----------TGGCCCGTAATCGGAGC-----------------------GCACAAAACAT----------- 170
| ||| |||..||| ||.|||.|.||
Sbjct 1405 GGAGTTCAGTGATGG------ATCTCAGCTCACTGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTC 1472
Query 171 -------------GATGGG-----ACACGTAACGGGACCACACAGGGCACATTGGGC----------------- 209
|.|||| |.|||| |.||||| || |||.|| ||
Sbjct 1473 GGCCTCCCAAGTAGCTGGGATTACAGACGT----GCACCAC-CA-GGCCCA----GCTAATTTATTTTTTAGTT 1536
Query 210 ----ACTTGCAGG---------------------GGCGCGAGG---------------TGGCGGCACG------ 237
|.||||.|| .|| |.||| ||||..||.|
Sbjct 1537 TTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGC-CTAGGCTGGTCTTGAACTCCTGGCTTCAAGCGATCC 1609
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1610 TCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCAATACTGCCCCATTGGG 1683
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1684 GGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAGTATATTATGACCATAATATTCAT 1757
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1758 TAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAGAGTGGGTAGAT 1831
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1832 CACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTACTAAAAATACAAAAAAT 1905
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1906 TAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGG 1979
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1980 GAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCA 2053
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2054 ATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTTGAAAGACTTCACATTA 2127
Query 238 -------------------- 237
Sbjct 2128 AAAAAAAACTCACAATTTAA 2147
