Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10619
- Subject:
- XR_002956450.1
- Aligned Length:
- 3980
- Identities:
- 200
- Gaps:
- 3762
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCAGGTAAAGCCCTATCACCGGGTCTGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCCAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGCACGGCAGGAGCGGCGGCCCAGCACTTGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCAAAATATCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAACTTTTCTACCCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGCTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATTACAGGTCCCCGCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGACATCAAGCCCTCCCTGCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCAATTGAAAAATCAGTTAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAACTGTCTCAAAAAACAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGAAGACTAGATTATTGCTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCACCCATTCCTGTTAGGCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTTGCAGTGGGCTTGTGCTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTTAGCCCTCTGGCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGAGCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGTGGCAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCAAAGGAACTGAGTGCCCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTTTCCAGCTGCTTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGGTGATGTTTGACAGTGGCTGCCTGCCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTCACCCACATCAACCCACATGGGATACTTTATTTATT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TATTTATCTATTTATTTATTTATTTATTTATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAGGCTGGAGTGCCG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGCCTCCAGAGTAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGGGACTACAGGAACACACCACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGATGGGGGTCTCTCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAAGTACTGGGATT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACAGAATCGGCTCCCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAAC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCT 3034
Query 1 -----------------------------------ATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCT 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 3035 GGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCT 3108
Query 40 GGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACT 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACT 3182
Query 114 ACAGAGGTCGCACG---------GTGAGTTGCCAGG-TG-----------TGGCCCGTAATCGGAGC------- 159
|||||||||||||| .|||| .||||| || ||| |||..|||
Sbjct 3183 ACAGAGGTCGCACGAGGCTCGCTCTGAG--CCCAGGCTGGAGTTCAGTGATGG------ATCTCAGCTCACTGC 3248
Query 160 ----------------GCACAAAACAT------------------------GATGGG-----ACACGTAACGGG 188
||.|||.|.|| |.|||| |.|||| |.
Sbjct 3249 AGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGT----GC 3318
Query 189 ACCACACAGGGCACATTGGGC---------------------ACTTGCAGG---------------------GG 220
||||| || |||.|| || |.||||.|| .|
Sbjct 3319 ACCAC-CA-GGCCCA----GCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTG 3386
Query 221 CGCGAGG---------------TGGCGGCACG------------------------------------------ 237
| |.||| ||||..||.|
Sbjct 3387 C-CTAGGCTGGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGG 3459
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3460 CGTAGGCTACAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACA 3533
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3534 TTCAAACCACAGCAGTATATTATGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACC 3607
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3608 TGTAATCCCAGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCA 3681
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3682 CATGATGAAACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCT 3755
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3756 ACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTG 3829
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3830 CACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAG 3903
Query 238 ---------------------------------------------------------- 237
Sbjct 3904 TGTCATTGAATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA 3961
