Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10712
- Subject:
- NM_001287390.2
- Aligned Length:
- 1580
- Identities:
- 718
- Gaps:
- 862
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTCAGGACTGCAGCAGCCATCTCTGTGCACCTGGTGGGGCCCCTTCAGGGAAGGAAGGCTGGAGCCCCACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACTTGGTTCTTGCACCAGACTCAGGTGGCTGAGAAGAATGTTGGATCCCCAGCTCCACGGCCCACCAGCCATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGGACTGGCAAACCCACAGGAACGGAAGGTTCCTCAGGGACCACAAAGCCCATGTGAGGTCCCTGCTGCTGAA 222
Query 1 ------------------------------------------------------------ATGGCCAAACAGCT 14
||||||||||||||
Sbjct 223 GGGATTCTGAGGACAGGAGGAGCCAAATTACCTATCCAGGGTCACCCAGCCAAGCTCGCCATGGCCAAACAGCT 296
Query 15 GCAGGCCCGAAGGCTAGACGGGATCGACTACAACCCCTGGGTGGAGTTTGTGAAACTGGCCAGTGAGCATGACG 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCAGGCCCGAAGGCTAGACGGGATCGACTACAACCCCTGGGTGGAGTTTGTGAAACTGGCCAGTGAGCATGACG 370
Query 89 TCGTGAACTTGGGCCAGGGCTTCCCGGATTTCCCACCACCAGACTTTGCCGTGGAAGCCTTTCAGCACGCTGTC 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCGTGAACTTGGGCCAGGGCTTCCCGGATTTCCCACCACCAGACTTTGCCGTGGAAGCCTTTCAGCACGCTGTC 444
Query 163 AGTGGAGACTTCATGCTTAACCAGTACACCAAGACATTTGGTTACCCACCACTGACGAAGATCCTGGCAAGTTT 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGTGGAGACTTCATGCTTAACCAGTACACCAAGACATTTGGTTACCCACCACTGACGAAGATCCTGGCAAGTTT 518
Query 237 CTTTGGGGAGCTGCTGGGTCAGGAGATAGACCCGCTCAGGAATGTGCTGGTGACTGTTGGTGGCTATGGGGCCC 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTTGGGGAGCTGCTGGGTCAGGAGATAGACCCGCTCAGGAATGTGCTGGTGACTGTTGGTGGCTATGGGGCCC 592
Query 311 TGTTCACAGCCTTCCAGGCCCTGGTGGACGAAGGAGACGAGGTCATCATCATCGAACCCTTTTTTGACTGCTAC 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGTTCACAGCCTTCCAGGCCCTGGTGGACGAAGGAGACGAGGTCATCATCATCGAACCCTTTTTTGACTGCTAC 666
Query 385 GAGCCCATGACAATGATGGCAGGGGGTCGTCCTGTGTTTGTGTCCCTGAAGCCGGGTCCCATCCAGAATGGAGA 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGCCCATGACAATGATGGCAGGGGGTCGTCCTGTGTTTGTGTCCCTGAAGCCGGGTCCCATCCAGAATGGAGA 740
Query 459 ACTGGGTTCCAGCAGCAACTGGCAGCTGGACCCCATGGAGCTGGCCGGCAAATTCACATCACGCACCAAAGCCC 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACTGGGTTCCAGCAGCAACTGGCAGCTGGACCCCATGGAGCTGGCCGGCAAATTCACATCACGCACCAAAGCCC 814
Query 533 TGGTCCTCAACACCCCCAACAACCCCCTGGGCAAGGTGTTCTCCAGGGAAGAGCTGGAGCTGGTGGCCAGCCTT 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGTCCTCAACACCCCCAACAACCCCCTGGGCAAGGTGTTCTCCAGGGAAGAGCTGGAGCTGGTGGCCAGCCTT 888
Query 607 TGCCAGCAGCATGACGTGGTGTGTATCACTGATGAAGTCTACCAGTGGATGGTCTACGACGGGCACCAGCACAT 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGCCAGCAGCATGACGTGGTGTGTATCACTGATGAAGTCTACCAGTGGATGGTCTACGACGGGCACCAGCACAT 962
Query 681 CAGCATTGTCTCAGCAGCTGTTCTGTTCGGCCTTGGGCAGCCAGCCTCCCTGGCATGTGGGAACGGACCC---- 750
||||||| |||||||||||||||||||||||||||||||
Sbjct 963 CAGCATT--------------------------------GCCAGCCTCCCTGGCATGTGGGAACGGACCCTGAC 1004
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1005 CATCGGCAGCGCCGGCAAGACCTTCAGCGCCACTGGCTGGAAGGTGGGCTGGGTCCTGGGTCCAGATCACATCA 1078
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1079 TGAAGCACCTGCGGACCGTGCACCAGAACTCCGTCTTCCACTGCCCCACGCAGAGCCAGGCTGCAGTAGCCGAG 1152
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1153 AGCTTTGAACGGGAGCAGCTGCTCTTCCGCCAACCCAGCAGCTACTTTGTGCAGTTCCCGCAGGCCATGCAGCG 1226
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1227 CTGCCGTGACCACATGATACGTAGCCTACAGTCAGTGGGCCTGAAGCCCATCATCCCTCAGGGCAGCTACTTCC 1300
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1301 TCATCACAGACATCTCAGACTTCAAGAGGAAGATGCCTGACTTGCCTGGAGCTGTGGATGAGCCCTATGACAGA 1374
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1375 CGCTTCGTCAAGTGGATGATCAAGAACAAGGGCTTGGTGGCCATCCCTGTCTCCATCTTCTATAGTGTGCCACA 1448
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1449 TCAGAAGCACTTTGACCACTATATCCGCTTCTGTTTTGTGAAGGATGAAGCCACGCTCCAGGCCATGGACGAGA 1522
Query 751 -------------------------- 750
Sbjct 1523 AGCTGCGGAAGTGGAAGGTGGAACTC 1548
