Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10735
• Subject: XR_001780818.1
• Aligned Length: 1042
• Identities: 522
• Gaps: 442

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGAGAGCCCGTGTTGTTGCATCCCCCAGTTCCCCGGTCTGTCATGGCAGCGCCCAGGCCTCCAGCCGGTGTGTG  74

Query    1  --------ATGCTGGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGACCCTCTTCGCCTTCGGAGAGCAGAG  66
                    |||.||.|.|||||||||||.||.||..|||||||||||||||||||||||.|.||.|||||..||
Sbjct   75  GACCCGAGATGTTGAGCTTTTTGTCCGCTCGACAGTCGGGTTTGGAGGACCCTCTTCGCTTGCGTAGAGCGCAG  148

Query   67  TCAACACGGAGAGTTTTGGGACTGGAATTAAATAAAGACAGAGATGTTGAAAGAATCCACGGCGGTGGAATTAA  140
            ||.||||||||.||..||||.|||||.|||||.||||||||.|||||.|||||||||||.|||.||||..||||
Sbjct  149  TCCACACGGAGGGTCCTGGGGCTGGAGTTAAACAAAGACAGGGATGTGGAAAGAATCCATGGCAGTGGGGTTAA  222

Query  141  CACCCTTGACATTGAACCTGTTGAAGGGAGATACATGTTATCAGGTGGTTCAGATGGTGTGATTGTACTTTATG  214
            ||||||.||||||||.||.||||||||.|||||||||||.||||||||.||.|||||.|||.|||||||.||||
Sbjct  223  CACCCTCGACATTGAGCCCGTTGAAGGAAGATACATGTTGTCAGGTGGCTCCGATGGCGTGGTTGTACTCTATG  296

Query  215  ACCTTGAGAACTCCAGCAGACAATCTTATTACACATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATCCTGAT  288
            |||||||||||.||||||||||..|..||||||||||||||||||||||||||.||||||||...|||||.|||
Sbjct  297  ACCTTGAGAACGCCAGCAGACAGCCCCATTACACATGTAAAGCAGTGTGTTCCGTTGGCAGAAGCCATCCCGAT  370

Query  289  GTTCACAGATACAGTGTGGAGACTGTACAGTGGTATCCTCATGACACTGGCATGTTCACATCAAGCTCATTTGA  362
            |||||||.||||||.|||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  371  GTTCACAAATACAGCGTGGAGACTGTTCAGTGGTATCCTCATGACACTGGCATGTTCACATCCAGCTCATTTGA  444

Query  363  TAAAACTCTGAAAGTATGGGATACAAATACATTACAAACTGCAGATGTATTTAATTTTGAGGAAACAGTTTACA  436
            |||||||||||||||.|||||||||||.|||||.||..||||||||||.|||||||||||||||||||||||||
Sbjct  445  TAAAACTCTGAAAGTGTGGGATACAAACACATTGCAGGCTGCAGATGTGTTTAATTTTGAGGAAACAGTTTACA  518

Query  437  GTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTT  510
            |||||||.|||||.||||...||||||||||||||.|||||||||||||.||.|||||||||||.|||||||||
Sbjct  519  GTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTACAACTT  592

Query  511  TGTGACTTGAAGTCTGGATCCTGTTCTCACATTCTACAGGGT------------ATTTT--TATTTTATT--TC  568
            ||||||||.|||||||||||||||||||||||||||||||||            ||.||  .|.|||..|  ||
Sbjct  593  TGTGACTTAAAGTCTGGATCCTGTTCTCACATTCTACAGGGTCACAGACAGGAAATCTTGGCAGTTTCCTGGTC  666

Query  569  A-AACGGCA--ACTA---CTTTGAGTAAACGATTCAATAAAAAGAAACGT-TAC--------------------  615
            | .|||.||  ||||   |||.|               .||.||.||.|| .||                    
Sbjct  667  ACCACGCCATGACTATATCTTGG---------------CAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGC  725

Query  616  --------------------------------------------------------------------------  615
                                                                                      
Sbjct  726  GGCTGACACTGGGGTTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACTGAGCCTTGAGCGCATCAGTTT  799

Query  616  --------------------------------------------------------------------------  615
                                                                                      
Sbjct  800  AGATGGCAATTGAGAAATAAGAGAAAGTGTGCCATAAGTAGCGGGATAAGACCCTGGAGAAAAGCAGAACTTTG  873

Query  616  --------------------------------------------------------------------------  615
                                                                                      
Sbjct  874  TCCTTGAGTCTGATAAGAAAGATTACCTCTCTTTGCTACTGTTTTGATATTTTCTGTATTGTGCTGACAGTAGA  947

Query  616  --------------------------------------------------------------------------  615
                                                                                      
Sbjct  948  GTAAAATTATGGGATGTGAGAAGAGCGTCAGGATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAAGTCACA  1021

Query  616  ------  615
                  
Sbjct 1022  AGCTGC  1027