Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_023386.1
Aligned Length:
5371
Identities:
217
Gaps:
5125

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAATTACAGGCTTGAGCCACTGCGCCTGGCCTGGTCTAGTCTCCTTTTAGAGATGAGAAAACTGAGGCTCAGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGTAACCTGTTCAAGGTCATGAACTGTCTTGAAGACCATAGTTGCAAGTGACAGAGCTGGGTCTCAGATGCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTCAGACCTGATACTGACTCCAGAGCTGTGCGCCTAAGCACTAGAGCACATAGCCTCCTTGCCCCAGGGAAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AACAATGGGAGGTTGTGGGTGACCTCTGGGTCTCAGGGCCCTGGGATATAGGGACTGTGCCTTTTTTTTTTTTT  296

Query    1  -------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAA  60
                         |   |||.|||||| |||||||||||||||||||||.||||.|||||||.|||||||||||
Sbjct  297  TTTTTTTGAGACAA---AGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTCAGCTCACTGCAA  367

Query   61  CCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACC  134
            ||||.|||||||||||||||..||||||.||||||||||||||..|||||||||||.||.||.||||..|||||
Sbjct  368  CCTCCGCCTCCCAGGTTCAATTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACC  441

Query  135  ACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTG  207
            ||.||||||||| |||||||||||||||.||||.|||||||.|||||.||..||||||||||||.|||||||||
Sbjct  442  ACACCCGGCTAATTTTTGTATTTTTGGTGGAGATGGGGTTTCGCCATATTGATCAGGCTGGTCTCGAACTCCTG  515

Query  208  ACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA-------------------------------  249
            ||||||.|||||||.|| .|||.|||||||||||.||.|||||                               
Sbjct  516  ACCTCAGGTGATCCGCCTGCCTTGGCCTCCCAAAATGCTGAGATTACAGGTGTGAGTGCCCATGCCTGGCAGGA  589

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  590  CTGTGCCTTTTGCATTTTCAAATGAAGGAAATGAGTATTTCTTGAGTGTTGACCGTGTGTCCCCCCGGCACCGT  663

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  664  GTCATGTGCTGGTTATGCACACACGATATTCTGTTTCATCCCCGGACAGCTCTGTGAGCCCCCACCCCAGAGCC  737

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  738  TGGAGTTGCAGAGGCAGCTACAGGAGGAGCAGGCCTCCTACCAGCGCAAGCTGCAGGCCTACCTGGAGGGCCAG  811

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  812  CAGCGGCAGGCCCAGCTTGTGTGCAGCGGCTGCAGGGCAAGTACAAGAAGAGGTACTCGGAGCTGGAGCAGCAG  885

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  886  CTGCTGGAGAGATCCGGAGAGCTGGAGCAGCAGCGGCTAAGGGACACAGAGCACAGCCAAGACCTGCAGAGTGC  959

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  960  CCTCATCCGGCTGGAGGAGGAGCCGCAGAGGAGTGCCAGCCTGGCCCAGGTGAAAGCCATGCTCCGAGAACATC  1033

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1034  TGGACCAGGCAGGCTCGGCCAACCAGGCTCTGAGTGAGGACATACAAAAGGTGACCAATGACTGGACACGCAGC  1107

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1108  CGCAAGGAGCTGGAGCAGCGGGAGGCGGCATGGAGGCGCGAGGAGGAGGACCTGCTGCAGCTGGGAGGGGAGCT  1181

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1182  GGCCCGGACATCACGAGCTGTCCAGGAGGCGGGCCTGGGACTGAGCACGGGCCTGTGGCTGGCAGAGAGCCGGG  1255

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1256  CCAAGGCAGCCCTGGAGAAGCAGGCCCTGCTGCAGGCCCAGCTGGAGGAGCAGCTGCGGGACAAGGTGCTCCAC  1329

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1330  TAGAAGGACCTGGCCCAGCAGCAGATGCAAAGTGACCTGGACAAGGCTGACCTCAGTGCCAGAGTGACAGAGCT  1403

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1404  GGGCCTGGCAGTGAAGCGTCTTCAGAAGCAGAATCCGGAGAAGGATCAGGTCAACACGGACCTCACTGAGAAGC  1477

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1478  TTGAGGCCCTGGAATCCCTGCGGCTACAGGAGCAGGTGGCCCTGGAGACAGAGGACGGAGAGGGGCTACAGCAG  1551

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1552  AGCCTAAGGGACCTGGCACAGTCCGTCCTGTCGGACACAGAGCGGCGTCCAGCTGAGCGGCTCCGAGCGCACCG  1625

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1626  CGGATGACTCCTTCGGCAGCCTGCGGGGGCTCTCGGCCCAGCAGACCCCGTCCCCACCGCGGCGCTCCTCGCCC  1699

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1700  GGCCGAGGCCGTTCACCCCGCCGAGGCCCCTCCCCGGCCTGCTCAGACTCCTCCACGCTCGCCCTGATCCACTC  1773

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1774  CACCTTACACAAGCACGAGCTGCAGGTCCAGGACATGCGTGGGCGCTATGAGGCAAGCCAGGACCTGCTGGGCA  1847

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1848  CCCTGCGGAAGCAGCTTAGCGACAGCGAGAGTGAGCGGCGGGCCCTAGAGGAACAGCTGCAGCGCCTGCGGGAC  1921

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1922  AAGACCGACAGCACCATGCAGGCCCACGAGGACGCCCAGCGCGAGGTGCAGCGGCTGCGGAGCGCCAAAGAGCT  1995

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1996  CCTGAGAAGGGAGAAGAGCAACCTGGCCCACAGCCTGCAGGTGGCCCAGCAGCAGGCCAAGGAGCTGCGGCAGG  2069

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2070  AGCGGAAGAAGCTGCAGGCTGCCCAGGAGGAGCTGCGGCGCCAGCGGTACTGGCTGGGGGAAGAGCAGGAGGAC  2143

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2144  GCAGTGCAGGATGGTGTGCGGGTGCGCCGGGAGCTTGAGCACAGCCATAGACAACTGGAGCAGCTGGAAGGGAA  2217

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2218  GCGCTCAGTCCTGGCCAAGGAGCTGGTGGAGGTGAGGGAGGCGCTGAGCCGCGCCACACTGCAACGGGACATGC  2291

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2292  TGCAGGCCGAGAAGGCCGAGGTGGCCGAGGCGCTGACCAAGGCTGAGGGCAGAGGAGGCCTCCCTGCAGGACTC  2365

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2366  CCTGTCCAAGCTGAGCGCCCTCAACGAGAGCCTTGCTCAGGACAAGTTGGATCTGAACCGCCTTGTCACCCAGG  2439

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2440  CCACAGCTGGAGGAAGAAAAGTGCGCCCTGCAGGGCCGGCAGCGGCAGGCGAAGCAGGAGGCCACAGTGGCACG  2513

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2514  GGAAGAGCAGGAGCGGCTGGAGGCGCTGCGGTTGGAACAGGAGGTGGCGCGGCAGGGCCTGGAGGGCTCCCTAT  2587

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2588  GAGCGGCGGAGCAGGCCCAGGAGGCAGTGGAGCAGCAGCTCCCCACGCTGCATCATGAGTGCAGCCGGCTGCAG  2661

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2662  GAGCAGCTAGCGCAGAAACACCCTCAAAGACACAGTGAGAAATAATGTCTAACCAAATGTCTGGGCACCCCCGA  2735

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2736  CCCAGGCAAATTGACACAAAAATTAATTTTCACAAATACTATCAATAGAAGTGACTAATAAATGTGGCATCATG  2809

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2810  TCCTGCCTGTTTATCCCATGACAATTAGTATAGTCGAGCGTAACATTGGCTTCCGTTCCCTTATAGTAGCAACA  2883

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2884  TGTAGGAGTTTCATTTAAAGTGAGGATAATTTTGACCTTACAGAGTTTCTCCCTACCCCTATCTACCATTGCCA  2957

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2958  CTTGTGGATTGTCATTTTGCCATGACTTTCTTTTAAAAAATATCAATAAGCTCTATACTTCAGTAATGTAAGTT  3031

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3032  TGAATTTCATCCTGGCTGCATAAGTCACTTTCCATTTTGACAAAGTCTAGAAATATTTTTCTCCATCTCCTTGA  3105

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3106  ATATGGGTAATGGATACCTATTGTGGGGCCCACTCTCAATCTCATGGTTTTATTTTAATTTAGTTCTCAATAGA  3179

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3180  TATGCCTCAGCTGCTTAAAAACCATTGAAAATGGCCCATGGCCTTGTCCATCTAACAGAGTCCAGTAAAATCCT  3253

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3254  GACAATGGAATGGGGAGAGAGAAAGTGAGAACCACCAAACTCAGCACAAAACGACTGAGTTTAAACCTCTGTGC  3327

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3328  TAAGAGATGATCAGAGTCTATCATGGCTTCTAGTAGCATGAGACCATGTCTCACGAATGACCCTAGGCTCCCAT  3401

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3402  GACAATGCCTACCTAAGAAAGCTCAAGGCTGCCAGGGGAACTTACTTTAGTCTAGCCAATACTTGATGATGGCA  3475

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3476  GTTTCAGGATCTTTCTTTCTTATAGCACTTACTAAGAAGGGAATCCTTCCTCCATCCCTTTGATATATGTGTGT  3549

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3550  ATCTCCTAGGGACTTCAATGTATCTTTGCCCAGGATCTGAAAGGCAATACTTTTGAGGTGTAGTTCTCAGGAAG  3623

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3624  GACTGAGCCTCTGTCTTCCAGTCTCTGTGGGAGGTTAGAATCCTAACTTCTAATATTGCCAGCTGGCAGACACA  3697

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3698  GCTGTCCTGATGAGGCAGACATTTAAAATGACCAATCTTTTGTAATGTTTCACTTGTGCCCTGCCCCCTGCCCT  3771

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3772  CTCCCCTGCCTCTCTCTCCCATTAGAATGCCATCACCTCTGCACAAATGCGAACAGAACCAGCCCCTTCCTCTA  3845

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3846  CGGTCAGTAGTTACTGAATAAAATTGGTTTTCATCGATTTGACTAATGTCTGATATATCTTTGACAAAATAAGT  3919

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3920  GTGAATGATTGTTTTTAGAGACACGGCAGCTGCAAAGAGAGGCACAGACATGGCAGGAGAGGGAGGGGTCACCT  3993

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3994  GACCCTTCTCATTTCATAGGCATCTATTCCTGCCTGGTGTTTATGAGCCTGAGACTTGGCAGGGCTGTCCTGGT  4067

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4068  ATATAACTCCATGGCTCTGCAGCAAGACTCGAATAGGCTGGTGGTGACACTTGGTGTGACCAGTCACCTTCAAA  4141

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4142  GATGCCATTAAGGGTTCACAAGAAAATGAAGGGAAACAGAAAAACTGATTATGAAAGTTGTTGCCTCTCCTGCT  4215

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4216  TCTTCATACAGAGTGTGTATGATATTGCTGTGTGATGTTAGACTGCAACTTAGCCCAACAGCTGTTCTAGTAAT  4289

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4290  TGGCAGTTTCTCATCGAGTTAAGCCTACCTGATAAAGAAGCACGCTTACATTTATTGATTACCCCCGTAAAATG  4363

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4364  AACAATACATCCAACAAGGCTTCTAGCAAAAATGTTCTTATTAACCTCCTTTTTATACTAAGGAAAAACTGGGT  4437

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4438  ACAACACAAATCTTCATCAACAGAAGAATACCAACTGTTATACAGTCATAAAACGATCCCAGAAGTTCACTCCA  4511

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4512  TACCATCAAAACCAGGAACCCACACTGATGCCCCTGATGGCAGAAAATCATGATACAAAAATGAGAGAAACGAG  4585

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4586  AGAGAGAAAATGTACTAGAGTCATGGTAGTGGGTAAAAGCCAAAGAGCTCAGTTTCTACTCATGATATTCATTA  4659

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4660  GAAGAACCAAAGGAACATGAGCCAACAGCTGTAAGGGTCCAGGTCTGCACAAGGTGCCTGTTGGGTGCAGGGTT  4733

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4734  CTGTTGGCTCCAGTGATATATCTCAGGTGGGCTAATTTTTACGGACATAGCCGCTGCAAAAATCTATCAAACAA  4807

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4808  TAATAAAGGGATAGCTACTTGCATGCTAATTTACCATTGTATAGAAGGGAGAACAGGCATCAGATTGTTTTCGT  4881

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4882  CAAATAAAAGCAAAACCAAGATTTATGAAGAAAAGAGGAAAGAGGAAAAAAAATCGCCTGGGACCTTTGTGATT  4955

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4956  TTGCTCCCCTTGGATAAGAGACTTGACAGAAAGCTTTCAAAGAGGTCACTGTGGCCTGTCTTCTTGAGACACAC  5029

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 5030  GACACTTGTTCACCACGGAAAACAATTACAGATGTTGGAGGACTTTAAAATATCCTAGTTTAGCAGTTCATCCT  5103

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 5104  ATGCCACAGAATCTGTGTGTGATGTCCACCATGTCCTTCTGTGGTACACCCCTTCAGTTAAGCCAGGAGGGTGC  5177

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 5178  CTCTCCCCTCAGTGGAATATCATACATCAATGTGTAGAAAGTTTGTTGTGCTGGCAAGTAAATGACAAAAGGGA  5251

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 5252  CATTGATAGAATTAGGAAACAAATTGGAATATGATCTGTTACCGTTCCCATGGAAGATAAATTTGCAGAATATA  5325

Query  250  -------------------------------------------  249
                                                       
Sbjct 5326  CTCAAATTAGAAGCATTAAATAAATGCTGTAATTTAAAATGGC  5368

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