Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_023386.1
- Aligned Length:
- 5371
- Identities:
- 217
- Gaps:
- 5125
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAATTACAGGCTTGAGCCACTGCGCCTGGCCTGGTCTAGTCTCCTTTTAGAGATGAGAAAACTGAGGCTCAGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGTAACCTGTTCAAGGTCATGAACTGTCTTGAAGACCATAGTTGCAAGTGACAGAGCTGGGTCTCAGATGCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTCAGACCTGATACTGACTCCAGAGCTGTGCGCCTAAGCACTAGAGCACATAGCCTCCTTGCCCCAGGGAAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACAATGGGAGGTTGTGGGTGACCTCTGGGTCTCAGGGCCCTGGGATATAGGGACTGTGCCTTTTTTTTTTTTT 296
Query 1 -------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAA 60
| |||.|||||| |||||||||||||||||||||.||||.|||||||.|||||||||||
Sbjct 297 TTTTTTTGAGACAA---AGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTCAGCTCACTGCAA 367
Query 61 CCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACC 134
||||.|||||||||||||||..||||||.||||||||||||||..|||||||||||.||.||.||||..|||||
Sbjct 368 CCTCCGCCTCCCAGGTTCAATTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACC 441
Query 135 ACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTG 207
||.||||||||| |||||||||||||||.||||.|||||||.|||||.||..||||||||||||.|||||||||
Sbjct 442 ACACCCGGCTAATTTTTGTATTTTTGGTGGAGATGGGGTTTCGCCATATTGATCAGGCTGGTCTCGAACTCCTG 515
Query 208 ACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA------------------------------- 249
||||||.|||||||.|| .|||.|||||||||||.||.|||||
Sbjct 516 ACCTCAGGTGATCCGCCTGCCTTGGCCTCCCAAAATGCTGAGATTACAGGTGTGAGTGCCCATGCCTGGCAGGA 589
Query 250 -------------------------------------------------------------------------- 249
Sbjct 590 CTGTGCCTTTTGCATTTTCAAATGAAGGAAATGAGTATTTCTTGAGTGTTGACCGTGTGTCCCCCCGGCACCGT 663
Query 250 -------------------------------------------------------------------------- 249
Sbjct 664 GTCATGTGCTGGTTATGCACACACGATATTCTGTTTCATCCCCGGACAGCTCTGTGAGCCCCCACCCCAGAGCC 737
Query 250 -------------------------------------------------------------------------- 249
Sbjct 738 TGGAGTTGCAGAGGCAGCTACAGGAGGAGCAGGCCTCCTACCAGCGCAAGCTGCAGGCCTACCTGGAGGGCCAG 811
Query 250 -------------------------------------------------------------------------- 249
Sbjct 812 CAGCGGCAGGCCCAGCTTGTGTGCAGCGGCTGCAGGGCAAGTACAAGAAGAGGTACTCGGAGCTGGAGCAGCAG 885
Query 250 -------------------------------------------------------------------------- 249
Sbjct 886 CTGCTGGAGAGATCCGGAGAGCTGGAGCAGCAGCGGCTAAGGGACACAGAGCACAGCCAAGACCTGCAGAGTGC 959
Query 250 -------------------------------------------------------------------------- 249
Sbjct 960 CCTCATCCGGCTGGAGGAGGAGCCGCAGAGGAGTGCCAGCCTGGCCCAGGTGAAAGCCATGCTCCGAGAACATC 1033
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1034 TGGACCAGGCAGGCTCGGCCAACCAGGCTCTGAGTGAGGACATACAAAAGGTGACCAATGACTGGACACGCAGC 1107
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1108 CGCAAGGAGCTGGAGCAGCGGGAGGCGGCATGGAGGCGCGAGGAGGAGGACCTGCTGCAGCTGGGAGGGGAGCT 1181
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1182 GGCCCGGACATCACGAGCTGTCCAGGAGGCGGGCCTGGGACTGAGCACGGGCCTGTGGCTGGCAGAGAGCCGGG 1255
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1256 CCAAGGCAGCCCTGGAGAAGCAGGCCCTGCTGCAGGCCCAGCTGGAGGAGCAGCTGCGGGACAAGGTGCTCCAC 1329
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1330 TAGAAGGACCTGGCCCAGCAGCAGATGCAAAGTGACCTGGACAAGGCTGACCTCAGTGCCAGAGTGACAGAGCT 1403
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1404 GGGCCTGGCAGTGAAGCGTCTTCAGAAGCAGAATCCGGAGAAGGATCAGGTCAACACGGACCTCACTGAGAAGC 1477
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1478 TTGAGGCCCTGGAATCCCTGCGGCTACAGGAGCAGGTGGCCCTGGAGACAGAGGACGGAGAGGGGCTACAGCAG 1551
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1552 AGCCTAAGGGACCTGGCACAGTCCGTCCTGTCGGACACAGAGCGGCGTCCAGCTGAGCGGCTCCGAGCGCACCG 1625
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1626 CGGATGACTCCTTCGGCAGCCTGCGGGGGCTCTCGGCCCAGCAGACCCCGTCCCCACCGCGGCGCTCCTCGCCC 1699
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1700 GGCCGAGGCCGTTCACCCCGCCGAGGCCCCTCCCCGGCCTGCTCAGACTCCTCCACGCTCGCCCTGATCCACTC 1773
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1774 CACCTTACACAAGCACGAGCTGCAGGTCCAGGACATGCGTGGGCGCTATGAGGCAAGCCAGGACCTGCTGGGCA 1847
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1848 CCCTGCGGAAGCAGCTTAGCGACAGCGAGAGTGAGCGGCGGGCCCTAGAGGAACAGCTGCAGCGCCTGCGGGAC 1921
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1922 AAGACCGACAGCACCATGCAGGCCCACGAGGACGCCCAGCGCGAGGTGCAGCGGCTGCGGAGCGCCAAAGAGCT 1995
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1996 CCTGAGAAGGGAGAAGAGCAACCTGGCCCACAGCCTGCAGGTGGCCCAGCAGCAGGCCAAGGAGCTGCGGCAGG 2069
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2070 AGCGGAAGAAGCTGCAGGCTGCCCAGGAGGAGCTGCGGCGCCAGCGGTACTGGCTGGGGGAAGAGCAGGAGGAC 2143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2144 GCAGTGCAGGATGGTGTGCGGGTGCGCCGGGAGCTTGAGCACAGCCATAGACAACTGGAGCAGCTGGAAGGGAA 2217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2218 GCGCTCAGTCCTGGCCAAGGAGCTGGTGGAGGTGAGGGAGGCGCTGAGCCGCGCCACACTGCAACGGGACATGC 2291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2292 TGCAGGCCGAGAAGGCCGAGGTGGCCGAGGCGCTGACCAAGGCTGAGGGCAGAGGAGGCCTCCCTGCAGGACTC 2365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2366 CCTGTCCAAGCTGAGCGCCCTCAACGAGAGCCTTGCTCAGGACAAGTTGGATCTGAACCGCCTTGTCACCCAGG 2439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2440 CCACAGCTGGAGGAAGAAAAGTGCGCCCTGCAGGGCCGGCAGCGGCAGGCGAAGCAGGAGGCCACAGTGGCACG 2513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2514 GGAAGAGCAGGAGCGGCTGGAGGCGCTGCGGTTGGAACAGGAGGTGGCGCGGCAGGGCCTGGAGGGCTCCCTAT 2587
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2588 GAGCGGCGGAGCAGGCCCAGGAGGCAGTGGAGCAGCAGCTCCCCACGCTGCATCATGAGTGCAGCCGGCTGCAG 2661
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2662 GAGCAGCTAGCGCAGAAACACCCTCAAAGACACAGTGAGAAATAATGTCTAACCAAATGTCTGGGCACCCCCGA 2735
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2736 CCCAGGCAAATTGACACAAAAATTAATTTTCACAAATACTATCAATAGAAGTGACTAATAAATGTGGCATCATG 2809
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2810 TCCTGCCTGTTTATCCCATGACAATTAGTATAGTCGAGCGTAACATTGGCTTCCGTTCCCTTATAGTAGCAACA 2883
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2884 TGTAGGAGTTTCATTTAAAGTGAGGATAATTTTGACCTTACAGAGTTTCTCCCTACCCCTATCTACCATTGCCA 2957
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2958 CTTGTGGATTGTCATTTTGCCATGACTTTCTTTTAAAAAATATCAATAAGCTCTATACTTCAGTAATGTAAGTT 3031
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3032 TGAATTTCATCCTGGCTGCATAAGTCACTTTCCATTTTGACAAAGTCTAGAAATATTTTTCTCCATCTCCTTGA 3105
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3106 ATATGGGTAATGGATACCTATTGTGGGGCCCACTCTCAATCTCATGGTTTTATTTTAATTTAGTTCTCAATAGA 3179
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3180 TATGCCTCAGCTGCTTAAAAACCATTGAAAATGGCCCATGGCCTTGTCCATCTAACAGAGTCCAGTAAAATCCT 3253
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3254 GACAATGGAATGGGGAGAGAGAAAGTGAGAACCACCAAACTCAGCACAAAACGACTGAGTTTAAACCTCTGTGC 3327
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3328 TAAGAGATGATCAGAGTCTATCATGGCTTCTAGTAGCATGAGACCATGTCTCACGAATGACCCTAGGCTCCCAT 3401
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3402 GACAATGCCTACCTAAGAAAGCTCAAGGCTGCCAGGGGAACTTACTTTAGTCTAGCCAATACTTGATGATGGCA 3475
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3476 GTTTCAGGATCTTTCTTTCTTATAGCACTTACTAAGAAGGGAATCCTTCCTCCATCCCTTTGATATATGTGTGT 3549
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3550 ATCTCCTAGGGACTTCAATGTATCTTTGCCCAGGATCTGAAAGGCAATACTTTTGAGGTGTAGTTCTCAGGAAG 3623
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3624 GACTGAGCCTCTGTCTTCCAGTCTCTGTGGGAGGTTAGAATCCTAACTTCTAATATTGCCAGCTGGCAGACACA 3697
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3698 GCTGTCCTGATGAGGCAGACATTTAAAATGACCAATCTTTTGTAATGTTTCACTTGTGCCCTGCCCCCTGCCCT 3771
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3772 CTCCCCTGCCTCTCTCTCCCATTAGAATGCCATCACCTCTGCACAAATGCGAACAGAACCAGCCCCTTCCTCTA 3845
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3846 CGGTCAGTAGTTACTGAATAAAATTGGTTTTCATCGATTTGACTAATGTCTGATATATCTTTGACAAAATAAGT 3919
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3920 GTGAATGATTGTTTTTAGAGACACGGCAGCTGCAAAGAGAGGCACAGACATGGCAGGAGAGGGAGGGGTCACCT 3993
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3994 GACCCTTCTCATTTCATAGGCATCTATTCCTGCCTGGTGTTTATGAGCCTGAGACTTGGCAGGGCTGTCCTGGT 4067
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4068 ATATAACTCCATGGCTCTGCAGCAAGACTCGAATAGGCTGGTGGTGACACTTGGTGTGACCAGTCACCTTCAAA 4141
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4142 GATGCCATTAAGGGTTCACAAGAAAATGAAGGGAAACAGAAAAACTGATTATGAAAGTTGTTGCCTCTCCTGCT 4215
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4216 TCTTCATACAGAGTGTGTATGATATTGCTGTGTGATGTTAGACTGCAACTTAGCCCAACAGCTGTTCTAGTAAT 4289
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4290 TGGCAGTTTCTCATCGAGTTAAGCCTACCTGATAAAGAAGCACGCTTACATTTATTGATTACCCCCGTAAAATG 4363
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4364 AACAATACATCCAACAAGGCTTCTAGCAAAAATGTTCTTATTAACCTCCTTTTTATACTAAGGAAAAACTGGGT 4437
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4438 ACAACACAAATCTTCATCAACAGAAGAATACCAACTGTTATACAGTCATAAAACGATCCCAGAAGTTCACTCCA 4511
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4512 TACCATCAAAACCAGGAACCCACACTGATGCCCCTGATGGCAGAAAATCATGATACAAAAATGAGAGAAACGAG 4585
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4586 AGAGAGAAAATGTACTAGAGTCATGGTAGTGGGTAAAAGCCAAAGAGCTCAGTTTCTACTCATGATATTCATTA 4659
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4660 GAAGAACCAAAGGAACATGAGCCAACAGCTGTAAGGGTCCAGGTCTGCACAAGGTGCCTGTTGGGTGCAGGGTT 4733
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4734 CTGTTGGCTCCAGTGATATATCTCAGGTGGGCTAATTTTTACGGACATAGCCGCTGCAAAAATCTATCAAACAA 4807
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4808 TAATAAAGGGATAGCTACTTGCATGCTAATTTACCATTGTATAGAAGGGAGAACAGGCATCAGATTGTTTTCGT 4881
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4882 CAAATAAAAGCAAAACCAAGATTTATGAAGAAAAGAGGAAAGAGGAAAAAAAATCGCCTGGGACCTTTGTGATT 4955
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4956 TTGCTCCCCTTGGATAAGAGACTTGACAGAAAGCTTTCAAAGAGGTCACTGTGGCCTGTCTTCTTGAGACACAC 5029
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5030 GACACTTGTTCACCACGGAAAACAATTACAGATGTTGGAGGACTTTAAAATATCCTAGTTTAGCAGTTCATCCT 5103
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5104 ATGCCACAGAATCTGTGTGTGATGTCCACCATGTCCTTCTGTGGTACACCCCTTCAGTTAAGCCAGGAGGGTGC 5177
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5178 CTCTCCCCTCAGTGGAATATCATACATCAATGTGTAGAAAGTTTGTTGTGCTGGCAAGTAAATGACAAAAGGGA 5251
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5252 CATTGATAGAATTAGGAAACAAATTGGAATATGATCTGTTACCGTTCCCATGGAAGATAAATTTGCAGAATATA 5325
Query 250 ------------------------------------------- 249
Sbjct 5326 CTCAAATTAGAAGCATTAAATAAATGCTGTAATTTAAAATGGC 5368
