Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_109997.1
- Aligned Length:
- 3408
- Identities:
- 216
- Gaps:
- 3161
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTAGATGACCCGCCCCCTCGGGCTGTCGGGGGGTCGAGACAGTGGAGTGTTCCTGATGCCAGCTCACGGAGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATCCAGGGAATTAGCTGATGCCAAGAGCCTCTTTTTGGCCAGCACTTACTAAGCACCAGAGACACAGCGAGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGAAGCATACGAGCACATCAGTGTGATTCTGCTGTGATGAAGGGCAAGAGAGGGCTCACTTTCCGGCGTGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTCAAGCTAGCCCCGAGGCCTGAGCAGGACCCGCCCAGGGGAAGATCTGGAGGAAAGCCATCTGAACATACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAGAGCAAAGGCCTGGTGGAGTCAAGACCACCTTGGCTGCCAGGTGGAATGGTGGAATAACTCAGGAGTCTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGTCTCTGAGATGTCAAACGGGCTTGGCACACACCCAGGAGCTCAATGCTGCTGGGAGCTGAGCAGCTGGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCAAGGAGCCCTCATCCCCACTGATGAAGAGGCCAGCCCAGGTTCTAGGCTAAGCAGGCCTGTGATTATAAACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCAGTGTCTCCCTGGACAAGTTTCTTGACCCTGAGAAGAATGTTAGACCATCAACTTTGTGAGGGGACAGGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTCCAACTTTTTTCCTGCTCAGTCCTTATTGCATACTCTTGGAGAAGGTCTACTGACTTGTTCTCAGATGCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACGGCTCAGCCAACCACCCATCCAGCAGAGCATTCAAAAGGCATCTGGAAGGAATGAGGGCGACCGTTCTGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGCCCCTATTTTTTTTTGAGAGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAATGGCATGACCTCTGCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCAAGCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGTACTACAGGCGTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCACCACACCCAGCAAATTTTTTCTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGCCAGGATGGTCTCAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTCTTGACCTCGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTTTTTTTTTTTCTTTTAGATGGAGTCTTCCTTTTGTCGCCCAAGGTGGAGTGCAATGGCACGATCTCAGCTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCATCAGCCTCCTGTGTAGCTGGGATTATAGGCACCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCACCATGCCCAGTTAATTTTTGTATTTTCAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGATGGTCTCGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCCTGACCTAGGGATCTGCCCGCCTTAGCCTCCCAAAGTTCTGGGATTACAGGCGTGAGGCACTGCACCTGGC 1332
Query 1 -----------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGAT 45
|||||||||.||||||||||||||||||||||||||||||.||||
Sbjct 1333 CATTTTGTTTGTTTGGGTTTGTTTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGAT 1406
Query 46 CTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTA 119
||||||.||.|||||.|||..||||||.||||||.||.|||||.||||||||||||||||||||||||||||||
Sbjct 1407 CTCGGCCCATTGCAAGCTCCACCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGACTA 1480
Query 120 TAGACATGCACCACCACGCCCGGCTAA--TTTTGTA-TTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGG 190
.||.|.|||.||||||.||||.||||| ||||||| |||||.||.||||||||||||..|||||||||.||||
Sbjct 1481 CAGGCGTGCGCCACCATGCCCAGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGG 1554
Query 191 CTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA-------------- 249
.||||||.||..||||||||||| ||||||.|| .|||.||||||||||||||.||.||
Sbjct 1555 ATGGTCTGGATTTCCTGACCTCA--TGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGC 1626
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1627 CACCACGCCTGGCCTGTTTGTTTTTTTGAGACACAGTCTTACTCTGTTGCCCAGGCTGGAGTGCAGTGACGCGA 1700
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1701 TCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCGTGTCTCAGCCTCCCAAGTAGCTGGGATT 1774
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1775 ATAGGTGCGCACCACCACGCCCGGCTTATTTTTTGTATTTTTAGTGCAGATGGGGTTTCACCATATTGGCCAGG 1848
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1849 CTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCTGCCTCAGCTTCCCAAAATGCTGGGATTACCAGCATGAGT 1922
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1923 CACCACGCCCGGCCAAGAAAGACCCATATTTTGTTTTGTTTTCTTTTTTGAGATGGAGTCTTGCTCTGTCGCTC 1996
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1997 AGGCTGGAGTGCAGTGGCGCAATCTCTGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCCATTCTCCTGCCTC 2070
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2071 AGCCTCCCGAGTAGCTGGGACTACAGGCGCACACCACCACGCCTGGCTAATTTTTGTATTTTTAGTACAGACAG 2144
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2145 GGCCAGACTGGTCACGAACTCCTGACCTCAGGCGATCCACCCGCCTCAGCCTTCCAAAGTGCTGGAATTATAGG 2218
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2219 TGTGAGCCATCGCACCTGGCCACCAGACCCCCATTAACTTCAGTAGGGATGGCACCAGGTTTGAGAGGCCAAAA 2292
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2293 GAGATCCAGAGCCAGCAAACAAGACTTAGGTTTGATTGAGGGGAATTTGCATACAGAGCAGTCCAGTGGAGGTG 2366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2367 GGCTAGATAGGAGAACTGCCCCACCTGCAGAAAGTATGCAGTATATATAGCATTTTCACTTAACACCCTCCCCC 2440
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2441 TAACAACTTTGATTTAACCCAAAACAAAGGGGCTAAATCCCCTGTACATCCACAGGACAGAATGGGGGCTCAGA 2514
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2515 TATTCCTCATGGGTAAGTAATGAATCTCTGGCTTGTCCTCACTTGGAACTCCTAACACATTCAGGTGCATCTGC 2588
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2589 CATACAGGGTCATTCTCAGAGTATGCTTAAGTTATTGCTGTCAGGTGCAGCTACCATACACAGGTGTGTCTGCC 2662
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2663 ATATAGCCACAGAAAGCAGGAGTCCTACAGCTGCTCCTCATGGGTCTCCATAGACTAGTCTTAGAGCAAGGATG 2736
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2737 GGCAGCCAGCCTCCAGGTTTAACCTGGCACTCTCCCCCAGCACTTGGTCCCCAGAGCAGGGGTGCATCTCTCCC 2810
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2811 ACTTCTGGTCAACCCTTCAGTAACAAGTAGAGCCCCCAGGGTCTTCATGAATATCTAGTTGAACTGGCTAAAGA 2884
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2885 AGAGGGCCCTGTAACAGGACAGAACACCAGGAGCCTGAACCCCGCATCTTCTACCCTTATCCTGCATTTATCCT 2958
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2959 GCCTGCATTCAAGCCTGTCCAGCTGCACCACTGGAGGTTACCATGGCAACTAAACCCAGAGGCAGCCGGTAACT 3032
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3033 GAGATACAGCTGCCAAGAGCAACTGATGGTGGAAAAGGCCAACAGCAGAGACTCTTAGAAGGAAGAGAAGTACA 3106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3107 CAGGAGGAGGCCCCAGAACCCTGAGGGTGCTACACTCAAATCTAATCCTACTCACAACTCAGCAGGCAGTCAAC 3180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3181 GTCTTGCACAAACTGCCATATCACCAACCAGAGGCACAGATATGGACACAATGGGGCCAATTTGCAGAGATGTT 3254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3255 TGCAACTATGGATGCAGAGTAGCACAGGTGGGACACATGTTGTTTAGCCCAAAAGCAACGGGTCTTGGTGAAAA 3328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3329 CGAAAATGGGTAGGGTACCATTGCTGTTTCCAATGAAACAATGAATTTTGTGTGCTCTTGAAAAAAAAAAAAAA 3402
Query 250 ---- 249
Sbjct 3403 AAAA 3406
