Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_136211.1
- Aligned Length:
- 3536
- Identities:
- 215
- Gaps:
- 3289
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCTGTACAATGGCTTCAACCTCATAGCAGCCGACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATATACATGGACACCGACACAGGCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAGACACACACACACAGGTGCACACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAA 1702
Query 1 ------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGA 44
|.|||||||.|||||||..|||||||||||||||||||||..||
Sbjct 1703 AACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGA 1776
Query 45 TCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACT 118
||||||||||||||||||||.||||||||.||||||||.|||||.|||||.||||||||.||.|||||||||.|
Sbjct 1777 TCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATT 1850
Query 119 ATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGC 191
|.||.|.||..||||||.||||.||||| ||||||.|||||.||.||||||||||||..|||||||.|||||||
Sbjct 1851 ACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGC 1924
Query 192 TGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA--------------- 249
||||||||||||||||||.| .|||||||||| .||||||||||||||||||.||.||
Sbjct 1925 TGGTCTTGAACTCCTGACGT--GGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 1996
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1997 ACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGT 2070
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2071 GCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAAT 2144
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2145 CCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCC 2218
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2219 AGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAG 2292
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2293 CGCATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCC 2366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2367 TGGACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGT 2440
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2441 CCATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGC 2514
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2515 CAGCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCT 2588
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2589 GTTGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCT 2662
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2663 CCTGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAAT 2736
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2737 GCTGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGG 2810
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2811 GTGGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGG 2884
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2885 GCCTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACT 2958
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2959 CAGAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATAC 3032
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3033 GTGTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCA 3106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3107 GTGGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCC 3180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3181 CCCCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTC 3254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3255 TGCCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTAT 3328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3329 TGGTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCATT 3402
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3403 TGGAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGG 3476
Query 250 ---------------------------------------------------------- 249
Sbjct 3477 CTATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCTATAATCC 3534
