Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_136212.1
- Aligned Length:
- 3432
- Identities:
- 215
- Gaps:
- 3185
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTGCATGGCCCGCTGATTGCTCCTCACAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCACACACATGCAAGCCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACACATGCACAGTTGCACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAG 1628
Query 1 ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAG 74
|.|||||||.|||||||..|||||||||||||||||||||..||||||||||||||||||||||.||||||||.
Sbjct 1629 ACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAA 1702
Query 75 GTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-T 147
||||||||.|||||.|||||.||||||||.||.|||||||||.||.||.|.||..||||||.||||.||||| |
Sbjct 1703 GTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAATT 1776
Query 148 TTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC 221
|||||.|||||.||.||||||||||||..|||||||.|||||||||||||||||||||||||.| .|||||||
Sbjct 1777 TTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGT--GGTGATCC 1848
Query 222 ACC-ACCTCGGCCTCCCAAAGTGTTGAGA--------------------------------------------- 249
||| .||||||||||||||||||.||.||
Sbjct 1849 ACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCAT 1922
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1923 AACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCC 1996
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1997 TGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCT 2070
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2071 GGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTAC 2144
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2145 CTGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAG 2218
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2219 GGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGCCAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTC 2292
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2293 CTCACGGCTTCTTCAGCACCACATGTGGATGCCTGTGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGA 2366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2367 GAGACCCCATGCGCGTGGGATGTGGTAGATGCTGATTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCA 2440
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2441 ATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCCTGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGG 2514
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2515 AGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCCCCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTC 2588
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2589 ATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGGATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGC 2662
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2663 ACCCAACCCCTAACTTGGCCTTTTCAGACCCATGAGAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCA 2736
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2737 GCCTGATTGTGACATGATGTGAGTCCACCTAGGGAGGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAG 2810
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2811 ACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCACTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCT 2884
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2885 GCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCACATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCC 2958
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2959 GGCTGGGGGCACTGCCCTTGCTGCCAACACATTCACCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAG 3032
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3033 TGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCATGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCC 3106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3107 GGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGTGGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCA 3180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3181 GCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGGTGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGAT 3254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3255 ATATCAGTGTCCTGACCCACAGTACCTCAGAATGTGACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAA 3328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3329 GGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCAATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGC 3402
Query 250 ---------------------------- 249
Sbjct 3403 TGGATACAGTGGCTCATGCCTATAATCC 3430
