Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_925251.3
Aligned Length:
2579
Identities:
217
Gaps:
2331

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCAGCTGCTGCTTAAGATATGGGGCTTGACTTAATTCATCTAAGTCTCAGTTTCCTCCACTGTAGATGGGGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGTAATATAATGTACTTCCTAGGCAGGGTCCAAGCAATAGATGTAAACTGCCCAGTGTCTGGGCACATCAGGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CACTCAAAAACTTGTAGCTAATTTAATAGCAGAGTTAATGATCAAAAAGGTAGAACCAGGGACCTTGACACTGG  222

Query    1  -------------------------------------------------------------ATGGAGTCTCGCT  13
                                                                         ||.||||.|.||.
Sbjct  223  CAGTCATCTCTGCATGTTATGATATTTTCTTTTTCTTTCCTTTTTTTTTTTTTTTTTTGAGATAGAGTTTTGCC  296

Query   14  C-TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATT  86
            | ||||||||||||||||.||||.|||..||||.||.|||..||||||||||||||||||||||||||||.|||
Sbjct  297  CTTGTTGCCCAGGCTGGAATGCAATGGGATGATATCAGCTTGCTGCAACCTCTGCCTCCCAGGTTCAAGCAATT  370

Query   87  CTTCTGCCTCAGCCTC-CAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTT  158
            ||.||.|||||||||| || |.|.|||||||.||.|||..||||||||||.||||.||||| ||||||||||||
Sbjct  371  CTCCTACCTCAGCCTCTCA-AATGGCTGGGATTACAGATGTGCACCACCATGCCCAGCTAATTTTTGTATTTTT  443

Query  159  GGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGG  231
            .||.|||||.|||||||||||||||.|||||||||||||||||||||||||||||.|||||||| ||.||||||
Sbjct  444  AGTAGAGACAGGGTTTTGCCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCGG  517

Query  232  CCTCCCAAAGTGTTGAGA--------------------------------------------------------  249
            ||||||||||||.||.||                                                        
Sbjct  518  CCTCCCAAAGTGCTGGGATTTGGCTAACTTCTTTTTTCAGATCATTTTCCAGATTTCTGCTCTACATACTACCT  591

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  592  TTCAATGAGGACTCTGCCAACCACTCTATTTAAAATTACTGGCCAGGTGTGGTGGCTCACACCTGTAATCCCAA  665

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  666  CACCTTCAGAGACTGAGGCAGGCAGACCCCCTGAGCCCAGGAGTTCAAGACCAACCTGGGCAATACAGTGAAAC  739

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  740  CCTGTCTCTACAAAAAGTACAAGAAAAATTAACCAGACACAGTAGCAAATGCCTGTGGTGCCAGCTACTCAGAA  813

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  814  AACAGATTAGGAGGATTCACTGAACCTGGGAGGTCGAGGTTGTGAGCTGTGATCACGCCGCTGCACTGCAGCCT  887

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  888  GGGCAACAGAATGAGACCGTCTCAAAAATAAAATAAAATAAAATAACACTCTACAGTCTTTCACCTCAGCACTT  961

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  962  TACACCCTTGTTTATAGAACTTGCTTTCTAACCATATAAGAAAAAAAAATTCTTGTTTGTTTTACCATTATTAT  1035

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1036  CTGTTTTCTCATTAGAAGATAAGCTCCTCAAGGGCATTTTGCCTGCTGATCAATTTCCAGTACCTGGTGATTTT  1109

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1110  CTGATATTTGTTGAATGAATGAAAGAACTTCACTTAGATTTGTTTTGCATTTTGAATGCTGGATTAGTCAAAAA  1183

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1184  GGGGTGATGCTTCCTCCCAGTACTCACACCCCAGCTTTAGAGTCAGGGCAACACCCAGTACACTGCTAACCAAG  1257

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1258  TGTCCTTAGAACCAATGGAAGGCGGTCAACTAGCTCTAACATAGGCATACCATGTAGTTGTGAGTGACAGAAAG  1331

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1332  CTTTGATAGGCTTCAGTATTCACCGCATGCTCTTTTGCCTAAAATCCTTCACATTTATGCCCATCAAGTGGCAC  1405

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1406  AGGGGAAAGATGTTTGAACTTTCCATGAAAACAGTAGGACACGCTTGCTAAATCAACACCACCCTGAGTGTGAT  1479

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1480  GTCAATCAAGTTCATAACGTTCAACAGAAACCTGCTTTTTGCAATTTGTGAACAGTTTTCACATCCGCTAACTA  1553

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1554  TTCATGCCTTGTTCGAGCAGATGTGTCAACATCTCAGCAAAACCCCAAATATCAATCAAATGGCAATGACTGGA  1627

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1628  ATTTTAATCAACTACAGGAGTTCTCAAAAAGAATGGAGAAGACTCCATGGCAACAAACATGTCACAAAGTGGAT  1701

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1702  AATGCCTTTTAATCCTGACTACTGAATCTTCAACATCCACCCTACCCTTCTGCAAGTAGAGCACAAATTCTACA  1775

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1776  AGACCAAGGACTATGTTCATGTCTTGTTCCCTGCACAGTGCTCGACACCTAATAGGGACATGATAAATATTTAT  1849

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1850  GGAATGAATGAATGAACTTAGTTAATTCAAGACATACTTCAAAGACCCTTTACAAAACCCAATTGACACGGTTC  1923

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1924  AAGGACTAGGCATGAAAGACAAAAATTTTTTTTCACAGGATGGATGAGACTTGGCAGCAGTATATATGGACAAA  1997

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1998  AATCTGAGAAGTTTTATTTTTCTCAAGCTTAATGTGAGAAGAGGGCCAACTGTGCAATTCATCTGCTAAGCCAT  2071

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2072  GAACAAAAGGAAGCAGGCTGGTTTTGGCCTGCAGGGTATAGTTCCTTGACCTCGGCTTCATCCAAACACTCTAA  2145

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2146  TTTCATCTCGTATTTGTATCCTTGGAGTGCCCAATGCCAGCAATACAGCCTACCCCTGGAAGATGCCCAGTATT  2219

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2220  GACCATTTGAATTTGATAAAAGAGATCCAGAACTCAAAGATCCTTGATGCTTTTTATCAATTCCACTAAACGTC  2293

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2294  AAGGACAGGAAATAAAAACATTTTTCTCTTCCGACTCAAACACAATACCCCTTTGTGAAGCTGCTAAAAATCTA  2367

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2368  GAAATGGCAAATCTGGGAAAATTTTCAGGTGAGCGATAGGCATCAAAATATTTCATTTTTGCTAAAAATATCTC  2441

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2442  TTAAGTTTTTCTTAGCATTCCAACTCACATCACACTGAATTTGAGTACAAAGAACAGAATCTGTTTTACCCTTG  2515

Query  250  ---------------------------------------------------------------  249
                                                                           
Sbjct 2516  TATTGGCAGTGACTTTGAGGTTATACAAAGGAGTCAAAGTAGCCTGTCCTATGACACTGAAGT  2578

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