Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10808
Subject:
XM_011238916.2
Aligned Length:
1362
Identities:
1216
Gaps:
57

Alignment

Query    1  ------------------------------------ATGTCAAACAAAGATCGACACATTGATTCCAGCTGTTC  38
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGTGGACCGTAACCCACAATTGCTTCTCTGCAGAATGTCAAACAAAGATCGACACATTGATTCCAGCTGTTC  74

Query   39  GTCCTTCATCAAGACGGAACCTTCCAGCCCAGCCTCCCTGACGGACAGCGTCAACCACCACAGCCCTGGTGGCT  112
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct   75  GTCCTTCATCAAGACGGAACCCTCCAGCCCAGCCTCCCTGACGGACAGCGTCAACCACCACAGCCCTGGTGGGT  148

Query  113  CTTCAGACGCCAGTGGGAGCTACAGTTCAACCATGAATGGCCATCAGAACGGACTTGACTCGCCACCTCTCTAC  186
            ||||.||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  149  CTTCCGACGCCAGTGGGAGTTACAGTTCAACCATGAATGGCCATCAGAACGGACTGGACTCGCCACCTCTCTAC  222

Query  187  CCTTCTGCTCCTATCCTGGGAGGTAGTGGGCCTGTCAGGAAACTGTATGATGACTGCTCCAGCACCATTGTTGA  260
            ||.||||||||.|||||||||||.||.|||||||||.|||||||||||||||||||||||||||||||.||.||
Sbjct  223  CCCTCTGCTCCGATCCTGGGAGGCAGCGGGCCTGTCCGGAAACTGTATGATGACTGCTCCAGCACCATCGTAGA  296

Query  261  AGATCCCCAGACCAAGTGTGAATACATGCTCAACTCGATGCCCAAGAGACTGTGTTTAGTGTGTGGTGACATCG  334
            .|||||||||||||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||
Sbjct  297  GGATCCCCAGACCAAGTGTGAATATATGCTCAACTCCATGCCCAAGAGACTGTGCTTAGTGTGTGGCGACATCG  370

Query  335  CTTCTGGGTACCACTATGGGGTAGCATCATGTGAAGCCTGCAAGGCATTCTTCAAGAGGACAATTCAAGGCAAT  408
            |.||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||.||.
Sbjct  371  CCTCTGGGTACCACTATGGGGTTGCATCATGTGAAGCCTGCAAGGCATTCTTCAAGAGGACGATTCAAGGTAAC  444

Query  409  ATAGAATACAGCTGCCCTGCCACGAATGAATGTGAAATCACAAAGCGCAGACGTAAATCCTGCCAGGCTTGCCG  482
            |||||.|||||||||||.|||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||
Sbjct  445  ATAGAGTACAGCTGCCCAGCCACGAATGAATGTGAGATCACAAAGCGCAGACGCAAATCCTGCCAGGCCTGCCG  518

Query  483  CTTCATGAAGTGTTTAAAAGTGGGCATGCTGAAAGAAGGGGTGCGTCTTGACAGAGTACGTGGAGGTCGGCAGA  556
            |||||||||||||.|.||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||
Sbjct  519  CTTCATGAAGTGTCTCAAAGTGGGCATGCTGAAAGAAGGGGTCCGTCTTGACAGAGTGCGTGGAGGTCGGCAGA  592

Query  557  AGTACAAGCGCAGGATAGATGCGGAGAACAGCCCATACCTGAACCCTCAGCTGGTTCAGCCAGCCAAAAAGCCA  630
            |||||||||||||.||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  593  AGTACAAGCGCAGAATAGATGCTGAGAACAGCCCATACCTGAACCCTCAGCTGGTGCAGCCAGCCAAAAAGCCA  666

Query  631  TTGCTCTGGTCTGATCCTGCAGATAACAAGATTGTCTCACATTTGTTGGTGGCTGAACCGGAGAAGATCTATGC  704
            |                     ||||||||||||||||.||||||||||||||||||||.||||||||||||||
Sbjct  667  T---------------------ATAACAAGATTGTCTCGCATTTGTTGGTGGCTGAACCAGAGAAGATCTATGC  719

Query  705  CATGCCTGACCCTACTGTCCCCGACAGTGACATCAAAGCCCTCACTACACTGTGTGACTTGGCCGACCGAGAGT  778
            |||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||.||||||||||
Sbjct  720  CATGCCTGACCCTACTGTCCCCGACAGTGACATCAAAGCCCTCACCACACTCTGTGACTTGGCTGACCGAGAGT  793

Query  779  TGGTGGTTATCATTGGATGGGCGAAGCATATTCCAGGCTTCTCCACGCTGTCCCTGGCGGACCAGATGAGCCTT  852
            ||||||||||||||||||||||.||.||||||||||||||||||||.|||||||||||.||||||||||||||.
Sbjct  794  TGGTGGTTATCATTGGATGGGCAAAACATATTCCAGGCTTCTCCACACTGTCCCTGGCAGACCAGATGAGCCTC  867

Query  853  CTGCAGAGTGCTTGGATGGAAATTTTGATCCTTGGTGTCGTATACCGGTCTCTTTCGTTTGAGGATGAACTTGT  926
            ||.||||||||.||||||||.|||.|||||||.||.||.||.|||||.||.|||||||||||||||||||||||
Sbjct  868  CTCCAGAGTGCATGGATGGAGATTCTGATCCTCGGCGTTGTGTACCGATCGCTTTCGTTTGAGGATGAACTTGT  941

Query  927  CTATGCAGACGATTATATAATGGACGAAGACCAGTCCAAATTAGCAGGCCTTCTTGATCTAAATAATGCTATCC  1000
            ||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||||
Sbjct  942  CTATGCAGACGATTATATAATGGATGAAGACCAGTCTAAATTAGCAGGCCTTCTTGACCTAAATAATGCTATCC  1015

Query 1001  TGCAGCTGGTAAAGAAATACAAGAGCATGAAGCTGGAAAAAGAAGAATTTGTCACCCTCAAAGCTATAGCTCTT  1074
            ||||||||||.|||||.|||||||||||||||||.||.||.||||||||.||||||||||||||.|||||||||
Sbjct 1016  TGCAGCTGGTGAAGAAGTACAAGAGCATGAAGCTAGAGAAGGAAGAATTCGTCACCCTCAAAGCAATAGCTCTT  1089

Query 1075  GCTAATTCAGACTCCATGCACATAGAAGATGTTGAAGCCGTTCAGAAGCTTCAGGATGTCTTACATGAAGCGCT  1148
            |||||||||||.||||||||.|||||||||||.|||||.||.|||||.|||||||||||.||||||||.||.||
Sbjct 1090  GCTAATTCAGATTCCATGCATATAGAAGATGTGGAAGCTGTGCAGAAACTTCAGGATGTGTTACATGAGGCCCT  1163

Query 1149  GCAGGATTATGAAGCTGGCCAGCACATGGAAGACCCTCGTCGAGCTGGCAAGATGCTGATGACACTGCCACTCC  1222
            |||||||||.||.||||||||||||||||||||||||||.||.||.|||||||||||||||||.|||||.||.|
Sbjct 1164  GCAGGATTACGAGGCTGGCCAGCACATGGAAGACCCTCGCCGTGCAGGCAAGATGCTGATGACGCTGCCGCTGC  1237

Query 1223  TGAGGCAGACCTCTACCAAGGCCGTGCAGCATTTCTACAACATCAAACTAGAAGGCAAAGTCCCAATGCACAAA  1296
            |||||||||||||.||||||||.||.|||||.|||||||||||||||||.|||||||||||.||.|||||||||
Sbjct 1238  TGAGGCAGACCTCCACCAAGGCAGTCCAGCACTTCTACAACATCAAACTCGAAGGCAAAGTGCCCATGCACAAA  1311

Query 1297  CTTTTTTTGGAAATGTTGGAGGCCAAGGTC  1326
            |||||||||||||||.||||||||||||||
Sbjct 1312  CTTTTTTTGGAAATGCTGGAGGCCAAGGTC  1341

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