Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10876
- Subject:
- NM_001098478.2
- Aligned Length:
- 1115
- Identities:
- 662
- Gaps:
- 370
Alignment
Query 1 ATGCGGGTCATGGCGCCCCGAACCCTCATCCTGCTGCTCTCGGGAGCCCTGGCCCTGACCGAGACCTGGGCCTG 74
|||||||||||||.||||.|||||||||||||.||.|||||||||||||||||.||.|||||..|
Sbjct 1 ---------ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGCCCTGACCGATACTTGGGCGGG 65
Query 75 CTCCCACTCCATGAGGTATTTCTACACCGCCGTGTCCCGGCCCGGCCGCGGAGAGCCCCGCTTCATCGCAGTGG 148
||||||||||.|||||||||||..||||||.|||||.||||||||||||||.||||||||||.||||||.||||
Sbjct 66 CTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGGAGCCCCGCTACATCGCCGTGG 139
Query 149 GCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGTCCAAGAGG--GGAGCCGCGGGCGC 220
..|||||.|||||||||||.|||.||||||||||||||||||||||||.||| |||| |||||||||||.||
Sbjct 140 AGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCC--GAGGATGGAGCCGCGGGAGC 211
Query 221 CGTGGGTGGAGCAGGAGGGGCCGGAGTATTGGGACCGGGAGA-CACAGAAGTA---CAAGCGCC-AGGCACAGA 289
|||||||||||||.|||||||||.|||||||||| |..|| ||||| .||| |||| ||| |.|||||||
Sbjct 212 CGTGGGTGGAGCAAGAGGGGCCGCAGTATTGGGA---GTGGACCACAG-GGTACGCCAAG-GCCAACGCACAGA 280
Query 290 CTGACCGAGTGAGCCTGCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCCTCCAGTGG 363
|||||||||||..||||.|||||||||.|.||..||||||||||||||||||.||||||||||||||||||.|.
Sbjct 281 CTGACCGAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTCACACCCTCCAGGGA 354
Query 364 ATGTATGGCTGCGACCTGGGGCCCGACGGGCGCCTCCTCCGCGGGTATGACCAGTCCGCCTACGACGGCAAGGA 437
|||.|||||||||||.|||||||||||||.||||||||||||||||||.|||||..|||.||||||||||||||
Sbjct 355 ATGAATGGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGA 428
Query 438 TTACATCGCCCTGAACGAGGACCTGCGCTCCTGGACCGCCGCGGACACGGCGGCTCAGATCACCCAGCGCAAGT 511
|||||||.|||||||||||||||||||||||||||||||.||||||||.|.|||||||||||||||||||...|
Sbjct 429 TTACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGCGCTTCT 502
Query 512 GGGAGGC---GGCCCGTGCGGCGGAG--CAGCAGAGAGCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCA 580
..||||| ||....|||.|.|||| |||.| ||||||||||||||..||||.||||||.||||||||
Sbjct 503 ATGAGGCAGAGGAATATGCAGAGGAGTTCAGGA-----CCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCA 571
Query 581 GATACCTGGAGAACGGGAAGGAGACGCTGCAGCGCGCGGAACACCCAAAGACACACGTGACCCACCATCTCGTC 654
|||||.|||||||.||||||||||||||.||||||||
Sbjct 572 GATACTTGGAGAATGGGAAGGAGACGCTACAGCGCGC------------------------------------- 608
Query 655 TCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCG 728
Sbjct 609 -------------------------------------------------------------------------- 608
Query 729 GGATGGCGAGGACCAAACTCAGGACACCGAGCTTGTGGAGACCAGGCCAGCAGGAGATGGAACCTTCCAGAAGT 802
Sbjct 609 -------------------------------------------------------------------------- 608
Query 803 GGGCAGCTGTGGTGGTGCCTTCTGGAGAAGAGCAGAGATACACGTGCCATGTGCAGCACGAGGGGCTGCCGGAG 876
|||||||
Sbjct 609 ----------------------------AGAGCAG--------------------------------------- 615
Query 877 CCCCTCACCCTGAGATGGGAGCCATCTTCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTGGCTGT 950
|||.||||||||||||||||||||||||||||||||||||||||.|.|||
Sbjct 616 ------------------------TCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGT 665
Query 951 CC-TGGCTGTCCTAGCTGT----CCTAGGAGCTGTGGTGGCTGTTGTTATGTGTAGGAGGAAGAGCTCAGGTGG 1019
|| ||| |||||| .|| |||||||||||.||||.|||.|||||.||||.|||||||||||.|.|
Sbjct 666 CCTTGG-------AGCTGTGGTCACT-GGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATAG 731
Query 1020 AAAAGGAGGGAGCTGCTCTCAGGCTGCGTCCAGCAACAGTGCCCAGGGCTCTGATGAGTCTCTCATCGCTTGTA 1093
|||..|||||||||.||||||||||| |||||
Sbjct 732 AAACAGAGGGAGCTACTCTCAGGCTG----------CAGTG--------------------------------- 762
Query 1094 AAGCC 1098
Sbjct 763 ----- 762
