Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10876
• Subject: NM_005516.6
• Aligned Length: 1112
• Identities: 945
• Gaps: 52

Alignment

Query    1  ATGCGGGT-CATGGCGCCCCGAACCCTCATCCTGCTGCTCTCGGGAGCCCTGGCCCTGACCGAGACCTGGGCCT  73
            ||   ||| .|||       ||||||||.|..|.||.|||||||..|||||||||||.|||.||||||||||..
Sbjct    1  AT---GGTAGATG-------GAACCCTCCTTTTACTCCTCTCGGAGGCCCTGGCCCTTACCCAGACCTGGGCGG  64

Query   74  GCTCCCACTCCATGAGGTATTTCTACACCGCCGTGTCCCGGCCCGGCCGCGGAGAGCCCCGCTTCATCGCAGTG  147
            |||||||||||.|||.|||||||.||||..||||||||||||||||||||||.|||||||||||||||.|.|||
Sbjct   65  GCTCCCACTCCTTGAAGTATTTCCACACTTCCGTGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCTCTGTG  138

Query  148  GGCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGTCCAAGAGG--GGAGCCGCGGGCG  219
            |||||||||||||||||.|||||||||||.|||||||.|||||||||||||||  ||||  ||.||||||||||
Sbjct  139  GGCTACGTGGACGACACCCAGTTCGTGCGCTTCGACAACGACGCCGCGAGTCC--GAGGATGGTGCCGCGGGCG  210

Query  220  CCGTGGGTGGAGCAGGAGGGGCCGGAGTATTGGGACCGGGAGACACAGAAGTACAAGCGCCAG-------GCAC  286
            ||||||.||||||||||||||.|.||||||||||||||||||||||.|       ||||||||       ||||
Sbjct  211  CCGTGGATGGAGCAGGAGGGGTCAGAGTATTGGGACCGGGAGACACGG-------AGCGCCAGGGACACCGCAC  277

Query  287  AGACTGACCGAGTGAGCCTGCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCCTCCAG  360
            |||.|..||||||||..|||||||..|||||||||||||||||.||||||||||||||||||||||||||.|||
Sbjct  278  AGATTTTCCGAGTGAATCTGCGGACGCTGCGCGGCTACTACAATCAGAGCGAGGCCGGGTCTCACACCCTGCAG  351

Query  361  TGGATGTATGGCTGCGACCTGGGGCCCGACGGGCGCCTCCTCCGCGGGTATGACCAGTCCGCCTACGACGGCAA  434
            ||||||.||||||||||.||||||||||||||||||.||||||||||||||||.||||.|||||||||||||||
Sbjct  352  TGGATGCATGGCTGCGAGCTGGGGCCCGACGGGCGCTTCCTCCGCGGGTATGAACAGTTCGCCTACGACGGCAA  425

Query  435  GGATTACATCGCCCTGAACGAGGACCTGCGCTCCTGGACCGCCGCGGACACGGCGGCTCAGATCACCCAGCGCA  508
            ||||||..||.|||||||.|||||||||||||||||||||||.|.|||||||||||||||||||.||.|||..|
Sbjct  426  GGATTATCTCACCCTGAATGAGGACCTGCGCTCCTGGACCGCGGTGGACACGGCGGCTCAGATCTCCGAGCAAA  499

Query  509  AGTGGGAGGCGGCCCGTGCGGCGGAGCAGCAGAGAGCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGA  582
            |||...|.|..|||..||.|||||||||.|||||||||||||||||.|.|||.||||||||||||||||.||.|
Sbjct  500  AGTCAAATGATGCCTCTGAGGCGGAGCACCAGAGAGCCTACCTGGAAGACACATGCGTGGAGTGGCTCCACAAA  573

Query  583  TACCTGGAGAACGGGAAGGAGACGCTGCAGCGCGCGGAACACCCAAAGACACACGTGACCCACCATCTCGTCTC  656
            |||||||||||.||||||||||||||||..|.|..|||.|.||||||||||||||||||.|||||.|.|.||||
Sbjct  574  TACCTGGAGAAGGGGAAGGAGACGCTGCTTCACCTGGAGCCCCCAAAGACACACGTGACTCACCACCCCATCTC  647

Query  657  TGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCGGG  730
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  648  TGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCAGG  721

Query  731  ATGGCGAGGACCAAACTCAGGACACCGAGCTTGTGGAGACCAGGCCAGCAGGAGATGGAACCTTCCAGAAGTGG  804
            ||||.||||.|||.||.||||||||.|||||.||||||||||||||.|||||.|||||||||||||||||||||
Sbjct  722  ATGGGGAGGGCCATACCCAGGACACGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGG  795

Query  805  GCAGCTGTGGTGGTGCCTTCTGGAGAAGAGCAGAGATACACGTGCCATGTGCAGCACGAGGGGCTGCCGGAGCC  878
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.||.|||||
Sbjct  796  GCAGCTGTGGTGGTGCCTTCTGGAGAGGAGCAGAGATACACGTGCCATGTGCAGCATGAGGGGCTACCCGAGCC  869

Query  879  CCTCACCCTGAGATGGGAGCCATCTTCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTGGCTGTCC  952
            |.||||||||||||||.||||..||||||||||||||||||||||||||||||||.||||||||||||.|.|||
Sbjct  870  CGTCACCCTGAGATGGAAGCCGGCTTCCCAGCCCACCATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCTCC  943

Query  953  TGG---CTGTCCTAGCTGTC-CTAGGAGCTGTGGTGGCTGTTGTTATGTGTAGGAGGAAGAGCTCAGGTGGAAA  1022
            |.|   ||||      .||| || |||||||||||.||||.|||.||.||.||||.||||||||||||||||||
Sbjct  944  TTGGATCTGT------GGTCTCT-GGAGCTGTGGTTGCTGCTGTGATATGGAGGAAGAAGAGCTCAGGTGGAAA  1010

Query 1023  AGGAGGGAGCTGCTCTCAGGCTGCGTCCAGCAACAGTGCCCAGGGCTCTGATGAGTCTCTCATCGCTTGTAAAG  1096
            |||||||||||.||||.||||||.||..|||.|||||||||||||.||   ||||||||.||  |||||     
Sbjct 1011  AGGAGGGAGCTACTCTAAGGCTGAGTGGAGCGACAGTGCCCAGGGGTC---TGAGTCTCACA--GCTTG-----  1074

Query 1097  CC  1098
              
Sbjct 1075  --  1074