Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10876
- Subject:
- NR_027822.1
- Aligned Length:
- 4848
- Identities:
- 781
- Gaps:
- 3976
Alignment
Query 1 ---------------------------------------------------------------ATGCGGGTCAT 11
|||.|||||||
Sbjct 1 ACGATCCCGGCACTACAGTCCCGGCGCAACCACCCGCACTCAGATTCTCCCCAAACGCCAAGGATGGGGGTCAT 74
Query 12 GGCGCCCCGAACCCTCATCCTGCTGCTCTCGGGAGCCCTGGCCCTGACCGAGACCTGGGCCTGCTCCCACTCCA 85
|||.||||||||||||.||||||||||||.|||.|||||||||||||||||||||||||||
Sbjct 75 GGCTCCCCGAACCCTCCTCCTGCTGCTCTTGGGGGCCCTGGCCCTGACCGAGACCTGGGCC------------- 135
Query 86 TGAGGTATTTCTACACCGCCGTGTCCCGGCCCGGCCGCGGAGAGCCCCGCTTCATCGCAGTGGGCTACGTGGAC 159
Sbjct 136 -------------------------------------------------------------------------- 135
Query 160 GACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGTCCAAGAGG--GGAGCCGCGGGCGCCGTGGGTGGAG 231
|||||.|||.|||||| |||| |||||.|||||||||||||||||||
Sbjct 136 -------------------------GCGACTCCGTGAGTCC--GAGGATGGAGCGGCGGGCGCCGTGGGTGGAG 182
Query 232 CAGGAGGGGCCGGAGTATTGGGACCGGGAGACACAGAAGTACAAGCGCCAGGCACAGACTGACCGAGTGAGCCT 305
||||||||||.||||||||||||||.||||||||.|||...||||.||||.||.||||.|.|||||||||.|||
Sbjct 183 CAGGAGGGGCTGGAGTATTGGGACCAGGAGACACGGAACGCCAAGGGCCACGCGCAGATTTACCGAGTGAACCT 256
Query 306 GCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCCTCCAGTGGATGTATGGCTGCGACC 379
|||||.|||||.|.||||.||||||||||||||||||
Sbjct 257 GCGGACCCTGCTCCGCTATTACAACCAGAGCGAGGCC------------------------------------- 293
Query 380 TGGGGCCCGACGGGCGCCTCCTCCGCGGGTATGACCAGTCCGCCTACGACGGCAAGGATTACATCGCCCTGAAC 453
|||||||.||||.|||||||||.||||||||||||||||||||||||
Sbjct 294 ---------------------------GGTATGAACAGTTCGCCTACGATGGCAAGGATTACATCGCCCTGAAC 340
Query 454 GAGGACCTGCGCTCCTGGACCGCCGCGGACACGGCGGCTCAGATCACCCAGCGCAAGTGGGAGGCGGCC----- 522
||||||||||.||||||||||||||||.||||.||||||||||||.||||||.|||||||||.||||.|
Sbjct 341 GAGGACCTGCACTCCTGGACCGCCGCGAACACAGCGGCTCAGATCTCCCAGCACAAGTGGGAAGCGGACAAATA 414
Query 523 CGTGCGGCGGAGCAGCAGAGAGCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGG 596
| .|.||||||...||.|||||||| |||||||.||||.|||||||||||||||||.|||||||||||||
Sbjct 415 C-----TCAGAGCAGGTCAGGGCCTACCT-GAGGGCAAGTGCATGGAGTGGCTCCGCAGACACCTGGAGAACGG 482
Query 597 GAAGGAGACGCTGCAGCGCGCGGAACACCCAAAGACACACGTGACCCACCATCTCGTCTCTGACCATGAGGCCA 670
|||||||||||||||||.||||||.|.|||||||.||||.||||||||.||.|.|.||||||||||||||||||
Sbjct 483 GAAGGAGACGCTGCAGCACGCGGATCCCCCAAAGGCACATGTGACCCAGCACCCCATCTCTGACCATGAGGCCA 556
Query 671 CCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCGGGATGGCGAGGACCAA 744
|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||.||||||.||||||||.
Sbjct 557 CCCTGAGGTGCTGGGCCCTGGGCCTCTACCCTGCGGAGATCACACTGACCTGGCAGCAGGATGGGGAGGACCAG 630
Query 745 ACTCAGGACACCGAGCTTGTGGAGACCAGGCCAGCAGGAGATGGAACCTTCCAGAAGTGGGCAGCTGTGGTGGT 818
||.||||||||.||||||||||||||||||||.|||||.||.|||||||||||||||||||..|||||.|||||
Sbjct 631 ACCCAGGACACGGAGCTTGTGGAGACCAGGCCTGCAGGGGACGGAACCTTCCAGAAGTGGGTGGCTGTAGTGGT 704
Query 819 GCCTTCTGGAGAAGAGCAGAGATACACGTGCCATGTGCAGCACGAGGGGCTGCCGGAGCCCCTCACCCTGAGAT 892
||||||.|||||.|||||||||||||.|||||||||||||||.|||||||||||.|||||||||||||||||||
Sbjct 705 GCCTTCCGGAGAGGAGCAGAGATACATGTGCCATGTGCAGCATGAGGGGCTGCCAGAGCCCCTCACCCTGAGAT 778
Query 893 GGGAGCCATCTTCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTGGCTGTCC-TGGCTGTCCTAGC 965
|||||||.|||||.|||||||||||||||||||||||||||||||||||||||..|.||| ||| |||
Sbjct 779 GGGAGCCGTCTTCTCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTGTTTCTCCTTGG-------AGC 845
Query 966 TGT----CCTAGGAGCTGTGGTGGCTGTTGTTATGTGTAGGAGGAAGAGCTCAGGTGGAAAAGGAGGGAGCTGC 1035
||| .|| |||||||||||.||||.||..|||||.||||.|||.||||||||
Sbjct 846 TGTGGTCACT-GGAGCTGTGGTTGCTGCTGCGATGTGGAGGAAGAAAAGCTCAGG------------------- 899
Query 1036 TCTCAGGCTGCGTCCAGCAACAGTGCCCAGGGCTCTGATGAGTCTC-TCATCGCTTGTAAA---------GCC- 1098
||||||..||||.|||..||||||||..|||| |.|| .|||||||| |||
Sbjct 900 --------------CAGCAATTGTGCTCAGTACTCTGATGCATCTCATGAT-ACTTGTAAAGAGGACTATGCCT 958
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 959 GTTCCTGTTCTGGTGTCTGCGTTCTGATCTCTTTCTCCCCTGGGTGTCCCTCATCTCTGACAGCAGCAGGAGTC 1032
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1033 ATTTTTCCTGTCATTAACCCCACAAGGTGGAAGGCAGCCCCTGCACACAGAAGTCTGTGGTATTAAGAGATGAA 1106
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1107 TTTTCAAGCCCGTGCAGCTTTTACCCTATTTCCAGGGCTCTTTCTTGGATTGTATTTTCTATCTTTTCCCCAAC 1180
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1181 CTTTTTAAAGGAACTAGATTCTGAAATTAGCAGAGAAGAGGGATGCCACAAGTTCTCATCTTAGGTAACTTTCT 1254
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1255 AGTGGAACTCCTCTTCTGCTCAGCTCTCCTACCCACTCTCCCTTCCCTGAGTTGTAGTAATCCTAGCACTGGCT 1328
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1329 CTAATGCAAACTCATGGATCTATAAAGCAAAGTCTAACTTAGATTTATATTTGTTTGGAAATTGGGATTCATAG 1402
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1403 TCAAAGATTGTTCTTTCCTAAGAGGGAAATATAATTGCATGCTGCAGTGTGCAGAGGGTTGGTGTGAAGGAGGG 1476
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1477 ATGCAGGGAGGAAGGGAGGGAGGACACACAAGCAGCACTGCTGGGAAAAGCACAGGCGGCCTGGATGTCAGTGT 1550
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1551 GAGGGGACCTTGTGCTGTCGTTGCTGCAAAACCGCATTTGGCCTGAGGCTATGTTAATAAAGATACTGCCTTTA 1624
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1625 GAATAGGAGGTGCTCTACAGTGATGATTCATTCAGCCGACATTTGCTGTCTGCCAGACATATGACAGAATGTTT 1698
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1699 TTGCATCTGGGGAAAGTCATTGAAGTAAAATCAGAAAAATCTCTAGCCTTGTGGAGCATGTGTTCCAGTGGGAA 1772
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1773 GAGGCAGACGGTACATACACTCTAATATATGCAGAGTAAATGAGGAAAGTGTTAGAAGGTGATAAGTGCTGTGG 1846
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1847 AACAGGTGATCAGAGTATGGGTTGTGGGACAGAGAAGGTAGCTATTGTGCCGGGGTTGTCAGCGTGGGCCTTGT 1920
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1921 TGGGAAGGTGACCTTTGATGAAATATTTGAAGGACATAAAGGAATTTGTCATGAGGGTATCTGGAAGAAGTTTT 1994
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 1995 TTCTAGGGAGTAGGAACCTTCAGTGTCAGTGTACCAGGGCAGGATCATGTCTGTGTGTTCTGGGAAGAACACGG 2068
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2069 GATCGGGTATGGCTAGAGCAGAGAGTCACTGAGATAAGGTCAGGGGTTTGGTCAGATCATGTGGGCATAGGGCT 2142
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2143 CAAGTATGTGGGAAGGATTTTGATTTTGAATGAGATAGTTTTAAGCAGAATAAAGACATGCCACAACTTCTCTT 2216
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2217 TTAAAAGGATCACTGTAGCTGCTCTGCTGAGAACAGAATCCAAAGGCCGGCGATGAGCAAGGCAGGTGGGAAAA 2290
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2291 CTGTAGGAAATGAGTGCAGTATTTCAGGCTGGAGATGTCGGTTACTTCAACTGGGGTGTGAGCAGTGGAAATAG 2364
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2365 TGGGACGTGATTGGATTCCTACTATTTCCAATCACTTTATACCGCATTTTCTAATGGACTAAATCTGGGGTATG 2438
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2439 AGAAAGAAGAGTAAAGGATACCAAAAATGTCAGACTGTGACTAAAAAGAGTTGCCATCAGCTGAGAATGAGAAG 2512
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2513 ACTAGCAGGAGCATATGAGAGGAGGGGACGTCGCAGGCAGTCACTATGGGAGACGTGGGATCTGAGATGCCGCT 2586
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2587 GAGAAATACCAGTGAGGTAGTCGGGTTGGCAGTTGGACAGATGAATCTGGAGACATTTAGGAGAAATAGACTTG 2660
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2661 GGAGGTGATGTCATATAACAGTTATTTAAAGCCTTGAGTCTGAATGACGTCTCCAAGGGAGTGATTGGCTGTAG 2734
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2735 AAGAGAACAGGAACAAGGACTGAACACTAGGCCTCTGTTGCTAAAGGATCTGATCAGACAACACACCTAGATCA 2808
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2809 GACTGCACAGTCCTGACCCCACATCTAGAAGGTACATAGACCAGGGAGTTCTAGACTTTCCTGTGGACAGGAAT 2882
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2883 CACCTGGACATCACCTTAAGTCTAAGCTGATCTGGAATCGAGAATGAGATTTCCTACTTATATAATGTTGCTGT 2956
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 2957 TGGCGCTGATGCTGCTGGTCTTCAGATCCCACTTTTGGTAGCAAGAACACAGACCAGGATTCCTAGGCTATGCA 3030
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3031 TCAGCCTCGCCTGTGAGGCTTGTTAATAAGCAATTCCTGCACTCCATGCGCAACATTCTGACACAGGGGCATCT 3104
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3105 GTGGAGAGGCCTGAGTATTCTACAACAAGCCCACAGCAAACCTGGTGCTCAGCCAGATTTGATATCACTGAGAT 3178
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3179 CAGTAGTTGGAGAATGCCCAGGATGGGGAGGGGTCTCAGACCCACATTTAAGTGTTGCTTTATTCTGGGTTTTT 3252
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3253 TATTTATTTATTTATTTATTTTTAAGGAGGATGTGTTTCTTTAATTATAAGACAGGATGCTGAGAGATAAATGT 3326
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3327 CATTTTCTCTATCATGGGGTATAGCCAGATGGAAGATTGAGAAGTGGCTCACAGCTCAGCAGAATGAAAAAATA 3400
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3401 TCTGAATGCTGCTTTCTGAAACTACTCTCCAGAATGATTTCACACTCACTCCTTGGAGCAAACAATGACTTGCA 3474
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3475 AATTTTTCTAATTTAAACATAAAGGAGTGTACATATTGGTATTAGTATTCATTTTATTTTGGGGAAGGGCACTG 3548
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3549 TATTAGTCCATAGTCCGTTTTCACACTGCCGATAAAGACATACCCAACATTGGGAAGAAAAAGAGGTTTAATTG 3622
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3623 GACTTACAGTTCCATTTGGCTGGGGAGGCCTCAGAATCATGGTGGGAGGCGAAAGGCACTTCTTACATGGTGGT 3696
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3697 GGCAAGAGAAAATGAGGAAGAAGCAAATGCCAAAACCCCTGATAAACACATTGGATCTCAGGAGACTTATTCAT 3770
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3771 TATCATGAGAATAGCATGGGAAAGACTGGCCCCCATGATTCAATTACCTCCCCCTGGGTCCCTCCCACAACATG 3844
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3845 TGGGAATTCTGGGAGATACAATTCAAGTTGAGATTTGGGTGGGGACACAGCCAAACCACATTGGACACAGAACC 3918
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3919 AGGTTTGAAGCTACACAGCCAGGAACATAATCCACAGCCACCCTAATTCAGATCTCTCATAGGAACCACTGTCC 3992
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 3993 CTGCTCCTGAGCACAGATGCTACTGCATATACCTCTGATACCCTGATGGCCGACACTGGGCCCTGTGGCAAAGA 4066
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 4067 CTGCTATCACTGCTGCTCCTGAGAACTGCTCCACTACTGCTCCTCAGCCATCTTTACCAAAATGCAGTATTTAC 4140
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 4141 TGTCCCAGCCTCTCTGTGTCATCTCATCCTGATTAGAAGCCCACATGTGGTTATCTAAATTGTGCAGCCAAAGC 4214
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 4215 CTCTTGCAGTGTTTAACTGCAATAATGTTGGGGAAAGTGAATTTTTCTCCTTTGTAGAAGGAGGTAGTCCCTGC 4288
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 4289 CTTCTAATAAGACTCTTCAACATAGGAAGAGAATTCAGTTGCTGGAGGTAGAGGGGTGAGGGATGGAAAAAGAA 4362
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 4363 TGACAAATTTCAATTCCTAGAATCATGTTCTGAGACTAGAACTTTATCTAGTACATTGCAGGCACCTGGGTTTG 4436
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 4437 GTTGAGTGTATAATAAATGACATAGTTCAACTTATTCCCTTGACAGTTTGTTTTGGGGTCCAGCTTTTGTCTAC 4510
Query 1099 -------------------------------------------------------------------------- 1098
Sbjct 4511 CCCAGTTTTCACACACAGATACGTGGAGAAGCATTGTGTGATGGTAAAATGTTTACTTGAAAGCCTTTTTCCCT 4584
Query 1099 -------------------------------------- 1098
Sbjct 4585 ATCTTTGTCTCTTGCTAGGATTAAAAACCCGTATCTGT 4622
