Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10876
• Subject: XM_017010808.1
• Aligned Length: 1241
• Identities: 942
• Gaps: 187

Alignment

Query    1  ATGCGGGTCATGGCGCCCCGAACCCTCATCCTGCTGCTCTCGGGAGCCCTGGCCCTGACCGAGACCTG------  68
                     |||       ||||||||.|..|.||.|||||||..|||||||||||.|||.|||||||      
Sbjct    1  ---------ATG-------GAACCCTCCTTTTACTCCTCTCGGAGGCCCTGGCCCTTACCCAGACCTGGGCGGG  58

Query   69  ------------------------GGCCT---------------------------------------------  73
                                    |||||                                             
Sbjct   59  TGAGTGCGGGGTCGGGATGGAAACGGCCTCTACCGGGAGTAGAGAGGGGCCGGCCCGGCGGGGGCGAAGGACTC  132

Query   74  -------------------------------------------------------GCTCCCACTCCATGAGGTA  92
                                                                   |||||||||||.|||.|||
Sbjct  133  GGGGAGCCGCGCCGGGAGGAGGGTCGGGCCGATCTCAGCCCCTCCTCGCCCCCAGGCTCCCACTCCTTGAAGTA  206

Query   93  TTTCTACACCGCCGTGTCCCGGCCCGGCCGCGGAGAGCCCCGCTTCATCGCAGTGGGCTACGTGGACGACACGC  166
            ||||.||||..||||||||||||||||||||||.|||||||||||||||.|.||||||||||||||||||||.|
Sbjct  207  TTTCCACACTTCCGTGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCTCTGTGGGCTACGTGGACGACACCC  280

Query  167  AGTTCGTGCGGTTCGACAGCGACGCCGCGAGTCCAAGAGG--GGAGCCGCGGGCGCCGTGGGTGGAGCAGGAGG  238
            ||||||||||.|||||||.|||||||||||||||  ||||  ||.||||||||||||||||.||||||||||||
Sbjct  281  AGTTCGTGCGCTTCGACAACGACGCCGCGAGTCC--GAGGATGGTGCCGCGGGCGCCGTGGATGGAGCAGGAGG  352

Query  239  GGCCGGAGTATTGGGACCGGGAGACACAGAAGTACAAGCGCCAG-------GCACAGACTGACCGAGTGAGCCT  305
            ||.|.||||||||||||||||||||||.|       ||||||||       |||||||.|..||||||||..||
Sbjct  353  GGTCAGAGTATTGGGACCGGGAGACACGG-------AGCGCCAGGGACACCGCACAGATTTTCCGAGTGAATCT  419

Query  306  GCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCCTCCAGTGGATGTATGGCTGCGACC  379
            |||||..|||||||||||||||||.||||||||||||||||||||||||||.|||||||||.||||||||||.|
Sbjct  420  GCGGACGCTGCGCGGCTACTACAATCAGAGCGAGGCCGGGTCTCACACCCTGCAGTGGATGCATGGCTGCGAGC  493

Query  380  TGGGGCCCGACGGGCGCCTCCTCCGCGGGTATGACCAGTCCGCCTACGACGGCAAGGATTACATCGCCCTGAAC  453
            |||||||||||||||||.||||||||||||||||.||||.|||||||||||||||||||||..||.|||||||.
Sbjct  494  TGGGGCCCGACGGGCGCTTCCTCCGCGGGTATGAACAGTTCGCCTACGACGGCAAGGATTATCTCACCCTGAAT  567

Query  454  GAGGACCTGCGCTCCTGGACCGCCGCGGACACGGCGGCTCAGATCACCCAGCGCAAGTGGGAGGCGGCCCGTGC  527
            |||||||||||||||||||||||.|.|||||||||||||||||||.||.|||..||||...|.|..|||..||.
Sbjct  568  GAGGACCTGCGCTCCTGGACCGCGGTGGACACGGCGGCTCAGATCTCCGAGCAAAAGTCAAATGATGCCTCTGA  641

Query  528  GGCGGAGCAGCAGAGAGCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGGAAGG  601
            |||||||||.|||||||||||||||||.|.|||.||||||||||||||||.||.||||||||||||.|||||||
Sbjct  642  GGCGGAGCACCAGAGAGCCTACCTGGAAGACACATGCGTGGAGTGGCTCCACAAATACCTGGAGAAGGGGAAGG  715

Query  602  AGACGCTGCAGCGCGCGGAACACCCAAAGACACACGTGACCCACCATCTCGTCTCTGACCATGAGGCCACCCTG  675
            |||||||||..|.|..|||.|.||||||||||||||||||.|||||.|.|.|||||||||||||||||||||||
Sbjct  716  AGACGCTGCTTCACCTGGAGCCCCCAAAGACACACGTGACTCACCACCCCATCTCTGACCATGAGGCCACCCTG  789

Query  676  AGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCGGGATGGCGAGGACCAAACTCA  749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||.||||.|||.||.||
Sbjct  790  AGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCAGGATGGGGAGGGCCATACCCA  863

Query  750  GGACACCGAGCTTGTGGAGACCAGGCCAGCAGGAGATGGAACCTTCCAGAAGTGGGCAGCTGTGGTGGTGCCTT  823
            ||||||.|||||.||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  864  GGACACGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCAGCTGTGGTGGTGCCTT  937

Query  824  CTGGAGAAGAGCAGAGATACACGTGCCATGTGCAGCACGAGGGGCTGCCGGAGCCCCTCACCCTGAGATGGGAG  897
            |||||||.|||||||||||||||||||||||||||||.||||||||.||.||||||.||||||||||||||.||
Sbjct  938  CTGGAGAGGAGCAGAGATACACGTGCCATGTGCAGCATGAGGGGCTACCCGAGCCCGTCACCCTGAGATGGAAG  1011

Query  898  CCATCTTCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTGGCTGTCCTGG---CTGTCCTAGCTGT  968
            ||..||||||||||||||||||||||||||||||||.||||||||||||.|.||||.|   ||||      .||
Sbjct 1012  CCGGCTTCCCAGCCCACCATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCTCCTTGGATCTGT------GGT  1079

Query  969  C-CTAGGAGCTGTGGTGGCTGTTGTTATGTGTAGGAGGAAGAGCTCAGGTGGAAAAGGAGGGAGCTGCTCTCAG  1041
            | || |||||||||||.||||.|||.||.||.||||.|||||||||||||||||||||||||||||.||||.||
Sbjct 1080  CTCT-GGAGCTGTGGTTGCTGCTGTGATATGGAGGAAGAAGAGCTCAGGTGGAAAAGGAGGGAGCTACTCTAAG  1152

Query 1042  GCTGCGTCCAGCAACAGTGCCCAGGGCTCTGATGAGTCTCTCATCGCTTGTAAAGCC  1098
            ||||.||..|||.|||||||||||||.||   ||||||||.||  |||||       
Sbjct 1153  GCTGAGTGGAGCGACAGTGCCCAGGGGTC---TGAGTCTCACA--GCTTG-------  1197