Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10956
Subject:
NR_134936.2
Aligned Length:
4206
Identities:
1353
Gaps:
2841

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACACAAGACGCCGGAGCTTCACAAGGGAGCGAACGAGGTAAGCAGCAGGCGCGGACAGGTAATCCCCAGCGGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCAGGGCCACCACCCTCTGTCCGACCCAGCCGGAGCCCGACCTGCGAGGCTGGCCGGGCATGTCCCCTCGGCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCTGTGCTACCAGGGCCAATCTCCGCCCGGAGACCGGTCCCTGACGCCGGGTGTTTATAAGAATGGAAGTGTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTTCCTTGCCCGATTCCTTCATGCTATATCTCATGAACCTCTGTAATCTTGGGGGAGAGACTATATTTAATGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGACAAACCTGTCACCAGTGTAGCAACAACAGTGTGAGGACAAAAGCAAATAAAAATTAAGAAGCGTTCAAATT  370

Query    1  ---------------------------------------------------------ATGAACCGATACACAAC  17
                                                                     |||||||||||||||||
Sbjct  371  TATATTCAACAAGGAAGTCATTTCAATCAACAACTTCTGCTGCATTATTTTTCCAAGATGAACCGATACACAAC  444

Query   18  CATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGG  91
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGG  518

Query   92  CCATCAAAAGGATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAG  165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCATCAAAAGGATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAG  592

Query  166  AAACTTAATCATGCCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGA  239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAACTTAATCATGCCAATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGA  666

Query  240  ATATATGAAAGAAAACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGAATCAGTCATCAGAAATA  313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATATATGAAAGAAAACCTCTATCAATTAATGAAAGACAGAAACAAGTTGTTCCCTGAATCAGTCATCAGAAATA  740

Query  314  TTATGTATCAAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATAGGGACATGAAACCAGAA  387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TTATGTATCAAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATAGGGACATGAAACCAGAA  814

Query  388  AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCACAGCC  461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCACAGCC  888

Query  462  ACCATACACTGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTT  535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ACCATACACTGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTT  962

Query  536  CTCCCATTGATGTGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACA  609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTCCCATTGATGTGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACA  1036

Query  610  AGTGAGGTCGATGAAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATA  683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGTGAGGTCGATGAAATCTTTAAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATA  1110

Query  684  CCAGCTGGCATCCTCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAAAACTCTTATTCCCAATG  757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCAGCTGGCATCCTCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAACTTAAAAACTCTTATTCCCAATG  1184

Query  758  CCAGTAATGAAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAACGACCGACAGCAAGCCAG  831
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CCAGTAATGAAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAACGACCGACAGCAAGCCAG  1258

Query  832  GCATTGAAACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTC  905
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GCATTGAAACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTC  1332

Query  906  TTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATA  979
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATA  1406

Query  980  TAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAG  1053
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAG  1480

Query 1054  AACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGT  1127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGT  1554

Query 1128  CAAAAACATGCCAACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCGTTGGGGTCAGACTATCT  1201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CAAAAACATGCCAACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGGCGTTGGGGTCAGACTATCT  1628

Query 1202  TCAAGTCTGGAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATG  1275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TCAAGTCTGGAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATG  1702

Query 1276  GGTGTTTTTAAAGAAAAAAGGAAAAAAGATTCTCCATTTCG---------------------------------  1316
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct 1703  GGTGTTTTTAAAGAAAAAAGGAAAAAAGATTCTCCATTTCGGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCA  1776

Query 1317  -TCAACAGGTGAAGA------------TGGCTGTTATTTCCCTCTCAGCACACCAGTTTCCCA--CGTTA----  1371
             ||.|||||.|||.|            | |||||||.||||||     .|.|.|.|.||||.|  .||.|    
Sbjct 1777  CTCGACAGGGGAAAACAAGAGCTTACCT-GCTGTTACTTCCCT-----AAAATCTGATTCCGAATTGTCAACTG  1844

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1845  CTCCAACCTCTAAACAGTACTACTTGAAACAATCAAGATATCTTCCAGGGCAGCATGACATTATACTACAAGGA  1918

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1919  CTGGCGGATCTGTGACACTGGCCTTCAGGGAAAGAGACGCAAGAGTCATAGTTACTGACCTGCTACTACTAACC  1992

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 1993  GGCTGTGTACTTGGAGCAAGATTCTGTTTTCTGTAACTTACGATGGGACTGCACCATCTGTCAGCTCACTCTGT  2066

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2067  GTGAATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATT  2140

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2141  CCCCAAGTCACTGGGACCCGTTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGGAAATCTTGGAAGTTATG  2214

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2215  CTACTTACAATCAGTCAGGATATATTCCTTCCTTTCTCAAAAAAGAAGTGCAGTCAGCTGGCCAGAGGATCCAC  2288

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2289  TTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTTTTCAGGACG  2362

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2363  TACTTATAATCCTACAGCAAAAAACCTAAATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGA  2436

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2437  CAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGA  2510

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2511  GTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTACAAATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCA  2584

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2585  AAAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTATTTTACTTATTTCCAAGAAATGCATTTTCTTAGCATCA  2658

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2659  TTGCCCACAGTGTTGATATATGGGTAGGATGTTACAAAGTATTGAATAAACTATTTGCCAAAGTATGAAGTATT  2732

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2733  TGATCTACAATTTAATAAATAGTAAATCCAATAAGAACCCTTAAAAAAAAACAACTTCCAGAAAATGTTTAGAG  2806

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2807  TGTTTTAGTTTTCATTTGTTGTATGTGCCCAAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGGCTTAAGAG  2880

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2881  GTTTGTCTTTTGTTTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTCAGCTGTGGTTCTTATTTGACTAAG  2954

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 2955  GCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATTTGTTTTTCTACTTTGAAGCTATGGGAGCG  3028

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3029  ATGGTAATTTCAATCTTGAGCAGGATATCTTTTTTTTTTTTTTTGAGGCGATGTTTCACTCTTGTGTCCAGGCT  3102

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3103  GGAGTGCAGTGGCACTATCTTGGCTTACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCT  3176

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3177  CCCGAGTAGCTGGGATTAGAGGCGTGTGCCACCATGCCTGGCTAATTTTTGTAGTATTAGTAGAGACAGGGTTT  3250

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3251  CACCATGTTGGTCAGGCTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAG  3324

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3325  TGCAGGGCTTACAGGTGTGAGCCACAGTGCCCAGCTTTTTTTTTTTTTTTTTAGAAATAAATTTATCTTTAACA  3398

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3399  TAGAGAATATCAAAGTTATGCCACTTGATTTTAGTGGACGGCTTGTGTTTTGATCTTGACCAGTACAGTTCCCA  3472

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3473  TGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG  3546

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3547  ACATCATTAAGAAAGTTCTGGAAACTGTGTTTGTTTGATGCTGGTTCATTGGACTTTTCAAATTGTTTTGTTTC  3620

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3621  TGTGTCCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCATGCTGCTGACCACTGA  3694

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3695  CTCAGCTCTGACCTTCACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAGTACAT  3768

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3769  ATATTATTTCCTTAGTTTATTTCCAAACTGGTATTTTAAATAGACACTTCGAACTTTGGGCTACTCTGTTTAAA  3842

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3843  TCTGCCACTTTCTGGACTGGACCTTAGTACTGTAAATTCTTTTTAAAGAATAATAATGTTACCAACTGCTGAGA  3916

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3917  TTTTTATGTATTTTGTGACTTTGTAACAACTGCTATTGTAATAAGTGTCATCTTGTGGGCATTATACAAAGGCA  3990

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 3991  TATTATAAAATAATAATGATATTTTTGTATAGAAGAGTCAACTGTTCAGATGTAAGATGTTGAAAAATGTTAAA  4064

Query 1372  --------------------------------------------------------------------------  1371
                                                                                      
Sbjct 4065  ATCTAAAGAGTAATTTATCCTAGTGGTAATGGTTATATGTATTTGTACAGTTTAAATTAATGTCTCAAAGCTGT  4138

Query 1372  --------------------------------------------------------------  1371
                                                                          
Sbjct 4139  GCAGTCTTTTGTTACTGGGACACTTTTAAACTCTGAATAGGCATTAAAAAAAATATGGCTAA  4200

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