Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11020
- Subject:
- XM_011242179.1
- Aligned Length:
- 4848
- Identities:
- 1440
- Gaps:
- 3264
Alignment
Query 1 ATGGCCACAGGAGGAGGTCCCTTTGAAGATGGCATGAATGATCAGGATTTACCAAACTGGAGTAATGAGAATGT 74
||||||||||||||||||||.||||||||.|.||||.||||||||||.||||||||||||||.|||||.|.|||
Sbjct 1 ATGGCCACAGGAGGAGGTCCTTTTGAAGAAGTCATGCATGATCAGGACTTACCAAACTGGAGCAATGACAGTGT 74
Query 75 TGATGACAGGCTCAACAATATGGATTGGGGTGCCCAACAGAAGAAAGCAAATAGATCATCAGAAAAGAATAAGA 148
.||||||.|.||||||||||||||.|||||||.||||||||||||.||.|||||||||||||||||||||||||
Sbjct 75 GGATGACCGACTCAACAATATGGAGTGGGGTGGCCAACAGAAGAAGGCCAATAGATCATCAGAAAAGAATAAGA 148
Query 149 AAAAGTTTGGTGTAGAAAGTGATAAAAGAGTAACCAATGATATTTCTCCGGAGTCGTCACCAGGAGTTGGAAGG 222
|||||||||||||||.|||||||||.||.|||||.||.|.|||||||||||||||.||.|||||||||||||||
Sbjct 149 AAAAGTTTGGTGTAGCAAGTGATAAGAGGGTAACTAACGCTATTTCTCCGGAGTCATCGCCAGGAGTTGGAAGG 222
Query 223 CGAAGAACAAAGACTCCACATACGTTCCCACACAGTAGATACATGAGTCAGATGTCTGTCCCAGAGCAGGCAGA 296
|||||||||||||.||||||||||||.||||||||.|||||.||||.||||||||||||.||||||||||||||
Sbjct 223 CGAAGAACAAAGATTCCACATACGTTTCCACACAGCAGATATATGACTCAGATGTCTGTTCCAGAGCAGGCAGA 296
Query 297 ATTAGAGAAACTGAAACAGCGGATAAACTTCAGTGATTTAGATCAGAGAAGCATTGGAAGTGATTCCCAAGGTA 370
|.||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||
Sbjct 297 ACTAGAGAAACTTAAACAGCGGATAAACTTCAGTGATTTAGATCAGAGAAGTATTGGAAGTGATTCTCAAGGTA 370
Query 371 GAGCAACAGCTGCTAACAACAAACGTCAGCTTAGTGAAAACCGAAAGCCCTTCAACTTTTTGCCTATGCAGATT 444
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGCAACAGCGGCTAACAACAAACGTCAGCTTAGTGAAAACCGAAAGCCCTTCAACTTTTTGCCTATGCAGATT 444
Query 445 AATACTAACAAGAGCAAAGATGCATCTACAAGTCCCCCAAACAGAGA------AACGATTGGATCAGCACAGTG 512
|||||||||||||||||.|||||..||.||||||..|||||.||||| |||| |||||||||||
Sbjct 445 AATACTAACAAGAGCAAGGATGCTACTGCAAGTCTTCCAAAGAGAGAGATGACAACG------TCAGCACAGTG 512
Query 513 TAAAGAGTTGTTTGCTTCTGCTTTAAGTAATGACCTCTTGCAAAACTGTCAGGTGTCTGAAGAAGATGGGAGGG 586
.|||||||||||||||||||||.|||||||||||||.||||||||||||||.||.|||||||||||||||||.|
Sbjct 513 CAAAGAGTTGTTTGCTTCTGCTCTAAGTAATGACCTTTTGCAAAACTGTCAAGTCTCTGAAGAAGATGGGAGAG 586
Query 587 GAGAACCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCTTGTTCAAATTCGCGATTATATTACTAAAGCTAGT 660
|.||.||||||||||||||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||
Sbjct 587 GGGAGCCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCTTGTTCAAATCCGTGACTATATTACTAAAGCTAGT 660
Query 661 TCCATGCGGGAAGATCTTGTAGAGAAAAATGAGAGATCTGCTAATGTTGAGCGCCTTACTCATCTAATAGATCA 734
||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||.||
Sbjct 661 TCTATGCGAGAAGATCTTGTAGAGAAAAATGAAAGATCTGCCAATGTTGAGCGTCTTACTCATCTAATAGAGCA 734
Query 735 CCTTAAAGAACAAGAGAAGTCATATATGAAATTTCTTAAAAAAATCCTTGCTAGAGAAAATGAGGAGGAGGATG 808
.||||||||.|||||.||||||||||||||||||||..|.||||||||||||||||||||||||||||||||||
Sbjct 735 TCTTAAAGAGCAAGAAAAGTCATATATGAAATTTCTCCAGAAAATCCTTGCTAGAGAAAATGAGGAGGAGGATG 808
Query 809 TTCGGACTATAGATTCAGCTGTGGGATCTGGTTCTGTAGCTGAGAGCACATCGCTAAACATAGATGTGCAGTCT 882
||||||||.||||.|||||||||||||||||||||||||||||||||||||||||||||..|||||||||||||
Sbjct 809 TTCGGACTGTAGACTCAGCTGTGGGATCTGGTTCTGTAGCTGAGAGCACATCGCTAAACGCAGATGTGCAGTCT 882
Query 883 GAGGCTTCAGATACCACGGCCAGAGATCCTCAGCAGGAGCCTATGGAAGAGATAGAAAATTTGAAGAAACAACA 956
||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 883 GAGGCTTCAGATACCACGGCCAGAGATCCTCAGCAGGAGCCTATGGAAGAGACAGAAAATTTGAAGAAACAACA 956
Query 957 TGATTTATTAAAAAGAATGTTACAACAGCAGGAGCAACTAAGAGCTCTACAGGGACGGCAGGCTGCACTTCTAG 1030
||||||||||||||||||||||||||||||||||||.||..|||||||.|||||.||.||||||||.|||||||
Sbjct 957 TGATTTATTAAAAAGAATGTTACAACAGCAGGAGCAGCTGCGAGCTCTGCAGGGCCGACAGGCTGCTCTTCTAG 1030
Query 1031 CTCTGCAACATAAAGCAGAGCAAGCTATTGCAGTGATGGATGATTCTGTTGTTGCAGAAACTGCAGGTAGCTTA 1104
||.||||.||||||||||||||||||||.||.|||||||||||.|||||||||.||||||||.||||.||||||
Sbjct 1031 CTTTGCAGCATAAAGCAGAGCAAGCTATAGCTGTGATGGATGACTCTGTTGTTACAGAAACTACAGGAAGCTTA 1104
Query 1105 TCTGGCGTCAGTATCACATCTGAACTAAATGAAGAATTGAATGACTTAATTCAGCGTTTTCATAATCAGCTTCG 1178
|||||.|||||.||||||||||||||||||||||||.|||||||.||||||||||||||.||||||||||||||
Sbjct 1105 TCTGGAGTCAGCATCACATCTGAACTAAATGAAGAACTGAATGATTTAATTCAGCGTTTCCATAATCAGCTTCG 1178
Query 1179 TGATTCTCAGCCTCCAGCTGTTCCAGACAATAGAAGACAGGCAGAAAGTCTTTCATTAACTAGGGAGGTTTCCC 1252
||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||.||||.|
Sbjct 1179 TGATTCTCAGCCTCCAGCTGTTCCAGACAACAGAAGACAGGCAGAAAGTCTTTCATTAACTAGAGAGATTTCTC 1252
Query 1253 AGAGCAGGAAACCATCAGCTTCAGAACGTTTACCTGATGAGAAAGTCGAACTTTTTAGCAAAATGAGAGTGCTA 1326
|||||||.||.||.||||.|||.||||.||||||||||||||||||..|.||||||||||||||||||||.|||
Sbjct 1253 AGAGCAGAAATCCCTCAGTTTCTGAACATTTACCTGATGAGAAAGTACAGCTTTTTAGCAAAATGAGAGTACTA 1326
Query 1327 CAGGAAAAGAAACAAAAAATGGACAAATTGCTTGGAGAACTTCATACACTTCGAGATCAGCATCTTAACAATTC 1400
||||||||||||||.||||||||||||||.||||||||||||||||..|||||||||||||||||.|||||.||
Sbjct 1327 CAGGAAAAGAAACAGAAAATGGACAAATTACTTGGAGAACTTCATAACCTTCGAGATCAGCATCTGAACAACTC 1400
Query 1401 ATCAT------------CCTCTCCACAAAGGAGTGTCGATCAGAGAAGT---ACTTCAGCTCCCTCTGCTTCTG 1459
||||| |.||||..|||||.||||..|||.|||||||| |||..|||||.|||||||.|||
Sbjct 1401 ATCATTTGTGCCTTCAACTTCTCTCCAAAGAAGTGGGGATAAGAGAAGTTCAACTGTAGCTCTCTCTGCTCCTG 1474
Query 1460 TAGGCTTGGCACCGGTTGTCAATGGAGAATCCAATAGCCTCACATCATCTGTTCCTTATCCTACTGCTTCTCTA 1533
|.|||||.|||.|.|.||||||||||||..|||||||.||.|..|||||||||||.|.||||.|..|.||||||
Sbjct 1475 TGGGCTTTGCATCAGCTGTCAATGGAGAGGCCAATAGTCTTATCTCATCTGTTCCCTGTCCTGCCACCTCTCTA 1548
Query 1534 GTATCTCAGAATGAGAGTGAAAACGAAGGCCACCTCAATCCATCTGAAAAACTCCAG----------------- 1590
||.||||||||||||||||||||.|||||.||.||.||||||.||||||||||.|||
Sbjct 1549 GTTTCTCAGAATGAGAGTGAAAATGAAGGTCATCTAAATCCAGCTGAAAAACTACAGAAGTTAAATGAAGTTCA 1622
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 1623 AAAGAGATTGAATGAACTGAGAGAATTAGTTCATTATTATGAACAAACATCAGATATGATGACAGATGCTGTAA 1696
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 1697 ATGAAAATACAAAAGATGAAGAAACTGAAGAGTCAGAATATGATTCTGAACATGAAAATTCTGAACCTGTTACT 1770
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 1771 AACATTAGAAATCCACAGGTAGCTTCTACCTGGAATGAAGTGAATACTAACAGTAATACACAGTGTGGTTCTAA 1844
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 1845 CAATAGAGATGGGAGACCAGTTAATTCTAACTGTGAAATTAATAACAGATCTGCTGCCAACATCAGAGCTCTAA 1918
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 1919 ACATGCCTCCATTAGACTGTCGATACAATAGAGAAGGAGAGCAGAGGTTGCATGTAGCACATGGAGAAGATGAG 1992
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 1993 GAAGAAGAAGTAGAAGAGGAAGGAGTCAGTGGGGCTTCATTATCTAGTCGTAGGAGCAGTCTGGTCGATGAAGC 2066
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2067 ACCAGAAGATGAAGAATTTGAACAGAAGATTAGTAGACTCATGGCTGCAAAAGAGAAACTTAAACAGCTCCAAG 2140
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2141 ATCTTGTTGCTATGGTGCAGGATGATGATGCAACTCAAGTGGTTGTCCCTGCTGCATCAAATTTGGATGATTTC 2214
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2215 TATGCAGCAGAAGAAGATATCAAACAAAATTCCAATAATGCAAGAGAAAATTCTAATAAAATAGATACTGGAGT 2288
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2289 AAATGAAAAAACAAGAGAGAAATTTTATGAGGCTAAACTACAGCAGCAACAGAGAGAGCTTAAACAATTGCAGG 2362
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2363 AGGAAAGAAAGAAATTGATTGAAATTCAAGAGAAAATTCAAGCAGTGCAAAAGGCATGCCCTGACCTTCAGCTC 2436
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2437 TCAGCCACTAGTATAAGTAGTGGTCCCACAAAAAAATATCTACCAGCTATTACTTCAACTCCAACTGTTAATGA 2510
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2511 AAATGACAGCAGTACAAGCAAGTGTGTTATTGATCCTGAAGATTCTTCAGTGGTGGATAATGAGTTGTGGTCAG 2584
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2585 ACATGAGAAGACATGAAATGTTAAGGGAAGAGCTACGGCAGAGAAGGAAGCAACTTGAAGCTCTAATGGCTGAA 2658
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2659 CACCAGAGGAGGCAAGGTCTAGCTGAGACCTCATCTCCAGTGGCTATATCATTGAGAAGTGATGGATCTGAGAA 2732
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2733 CCTGTGCACTCCTCAGCAAAGTAGAACAGAAAAAACAATGGCAACTTGGGGAGGTTCTACTCAGTGTGCATTAG 2806
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2807 ATGAAGAAGGAGATGAGGATGGCTATCTTTCAGAAGGAATTGTTCGCACAGATGAAGAAGAGGAGGAGGAGCAG 2880
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2881 GATGCCAGTTCCAATGATAACTTCCCTATATACCCTCCTAGCATGAATCAAAATTCTTACAATGTAAAGGAAAC 2954
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 2955 CAAAACCAGGTGGAAGAGCAATCGCCCTGTTTCAGCAGATGGAAATTACCGTCCTTTAGCCAAGACAAGGCAGC 3028
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3029 AGAATATCAGCATGCAACGACAAGAAAACCTTCGATGGGTGTCAGAGCTCTCTTACATAGAAGAGAAGGAGCAG 3102
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3103 TGGCAAGAACAGATTAATCAGCTAAAGAAACAACTCGATTTCAGTGTCAATATTTGTCAGACTCTGATGCAAGA 3176
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3177 CCAACAGACTTTATCTTGTTTGCTGCAGACTCTTCTAACAGGTCCGTACAGTGTTCTGCCTAGTAATGTGGCGT 3250
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3251 CCCCTCAAGTGCACCTTATCATGCATCAGCTGAACCAATGCTACACACAGCTAACATGGCAGCAGAACAATGTC 3324
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3325 CAGAGGTTAAAACAAATGCTAACTGAACTTATGCGCCAACAAAATCAGCACCCAGAAAAGCCTAGAAGCAAAGA 3398
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3399 AAGAGGCAGTAGTGCGTCACACCCTTCTTCTCCCAATTTATTTTGCCCTTTCAGCTTTCCAACACAGCCTGTAA 3472
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3473 ATCTGTTTAACCTGCCTGGATTTACTAACTTTCCATCATTTGCACCAGGAATGAATTTCAGCCCTTTATTTCCT 3546
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3547 TCTAATTTTGGAGATTTTTCTCAGAATGTTTCTACACCTACTGAACAGCAGCAGCCATTAGCTCAAAATCCTTC 3620
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3621 AGGGAAAACAGAGTATATGGCTTTTCCAAAACCCTTTGAAAGCAGTTCTTCTCTTGGAGCAGAAAAGCAAAGGA 3694
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3695 ATCAGAAACAGCCCGAAGAGGAAGCTGAAAACACTAAGACACCATGGTTATATGATCAAGAAGGTGGAGTAGAA 3768
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3769 AAACCATTTTTCAAGACTGGATTTACAGAGTCTGTAGAGAAAGCTACAAATAGTAACCGCAAAAATCAACCAGA 3842
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3843 TACAAGCAGGAGAAGACGTCAGTTTGATGAAGAATCCTTGGAAAGCTTTAGCAGTATGCCTGATCCTATAGACC 3916
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3917 CAACAACAGTAACTAAAACATTTAAAACAAGAAAAGCATCTGCCCAGGCCAGCCTGGCCTCTAAGGACAAAACT 3990
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 3991 CCCAAATCAAAGAGTAAGAAGAGGAATTCTACTCAGCTGAAAAGTAGAGTTAAAAATATTGGGTATGAAAGTGC 4064
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4065 CAGTGTGTCTAGCACATGTGAACCTTGCAAAAATAGGAACAGACATTCAGCCCAGACTGAAGAGCCTGTTCAAG 4138
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4139 CAAAATTATTCAGCAGAAAGAATCATGAACAGCTGGAAAAAATAATAAAATATAGTAGGTCTGCAGAAATATCT 4212
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4213 TCAGAGACTGGAAGTGATTTTTCCATGTTTGAAGCTTTACGGGATACTATTTATTCCGAAGTGGCTACATTAAT 4286
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4287 TTCTCAAAATGAGTCTCGTCCACATTTTCTTATTGAACTTTTCCATGAGCTGCAGCTACTTAATACAGACTACT 4360
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4361 TGAGACAGAGAGCTTTATATGCATTGCAGGATATCGTATCCAGACACATTTCTGAAAGTGATGAAAGAGAAGGA 4434
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4435 GAAAATGTAAAGCCTGTGAACTCTGGCACTTGGGTAGCATCCAATTCAGAGCTTACTCCGAGTGAGAGCCTTGT 4508
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4509 TACTACTGACGATGAAACATTTGAGAAGAACTTTGAAAGAGAAACACATAAAGTAAGTGAACAGAATGATGCTG 4582
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4583 ACAACGTGAGTGTCATGTCCGTATCCTCCAACTTTGAGCCATTTGCAACAGACGACTTAGGTAACACTGTGATT 4656
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4657 CACTTGGATCAAGCATTAGCCAGAATGAGAGAGTATGAGCGCATGAAGACCGAGACAGAAAGTCACTCAAATAT 4730
Query 1591 -------------------------------------------------------------------------- 1590
Sbjct 4731 GAGATGCACTTGCAGGGTTATTGAGGATGAAGATGGTGCTGCCGCCGCTGCCACAGTCAGTAATTCAGAAGAAT 4804
Query 1591 -------------------------------------- 1590
Sbjct 4805 TGATACTCAGCAACTGGACCGCCAAATTAAAGCAATTA 4842
