Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11058
- Subject:
- NM_001323325.2
- Aligned Length:
- 1284
- Identities:
- 660
- Gaps:
- 459
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCAGAAGCAAGCGTGACAACAATTTTTATAGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATATCAGAATTTAAAACCTATAGGCTCAGGAGCTCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAATGTTGCAATCAAGAAGCTAAGCCGACCATTTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTCTTATGAAATGTGTTAATCACAAAAATATAATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGA 296
Query 1 -------------------------ATGGAACTGATGGATGCCAA-CTTATGTCAAGTGATTCAGATGGAATTA 48
|||||.||.||||||||.|| ||| ||.|||||||||||||||||..||
Sbjct 297 AGAATTTCAAGATGTTTACATAGTCATGGAGCTCATGGATGCAAATCTT-TGCCAAGTGATTCAGATGGAGCTA 369
Query 49 GACCATGAGCGAATGTCTTACCTGCTGTACCAAATGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTAT 122
||.|||||..|||||||.|||||.||.||.||.|||.|||||||.||.||||||||.|||||||||||||||||
Sbjct 370 GATCATGAAAGAATGTCCTACCTTCTCTATCAGATGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTAT 443
Query 123 TCACAGGGATTTAAAACCAAGTAACATTGTAGTCAAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGG 196
|||..||||.|||||.||.|||||.||.|||||.||.|||||||||||.|||||.||.||.|||||.||.||||
Sbjct 444 TCATCGGGACTTAAAGCCCAGTAATATAGTAGTAAAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGG 517
Query 197 CCAGGACAGCAGGCACAAGCTTCATGATGACTCCATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATC 270
|||||||.|||||.||.||.||.||||||||.||.|||||.|||||.||.||.||||||||.||.|||||||||
Sbjct 518 CCAGGACTGCAGGAACGAGTTTTATGATGACGCCTTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATC 591
Query 271 CTGGGGATGGGCTACAAGGAGAACGTTGACATGTGGTCAGTAGGGTGCATCATGGGAGAAATGATAAAAGGTGC 344
||.||.||||||||||||||.|||||||||||.||||||||.|||||||||||||||||||||||.|||||||.
Sbjct 592 CTTGGCATGGGCTACAAGGAAAACGTTGACATTTGGTCAGTTGGGTGCATCATGGGAGAAATGATCAAAGGTGG 665
Query 345 AGTGCTGTTTCCTGGCACTGATCATATTGACCAGTGGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAG 418
.||..||||.||.||.||.|||||||||||.|||||||||||.||.||||||||.||.||||||||||||||.|
Sbjct 666 TGTTTTGTTCCCAGGTACAGATCATATTGATCAGTGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTG 739
Query 419 AATTCATGAAGAAATTGCAACCCACAGTAAGAAACTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTC 492
||||||||||||||.|||||||.||||||||.|..||.||.||.||..|.||.||.|||||.|||...|.|||.
Sbjct 740 AATTCATGAAGAAACTGCAACCAACAGTAAGGACTTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTT 813
Query 493 CCCAAACTCTTCCCAGATTCCCTCTTCCCAGCGGACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGA 566
...|||||||||||.|||..|||.||||||||.|||||.||.|||||.|||||.||||||||.||.||.|||||
Sbjct 814 GAGAAACTCTTCCCTGATGTCCTTTTCCCAGCTGACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGA 887
Query 567 CTTGTTGTCAAAGATGCTAGTGATTGACCCAGCAAAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACA 640
.|||||.||.||.|||||.||.||.||..||.|.|||||.||.||.||.||.||.||..|.||.||.||.||||
Sbjct 888 TTTGTTATCCAAAATGCTGGTAATAGATGCATCTAAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACA 961
Query 641 TCAACGTCTGGTATGACCCAGCCGAAGTGGAGGCGCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGA 714
||||.|||||||||||.||..|.||||..||.||.||.|||||..||||...||||||||||||.||||||||.
Sbjct 962 TCAATGTCTGGTATGATCCTTCTGAAGCAGAAGCTCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGG 1035
Query 715 GAACACACAATTGAAGAATGGAAAGAACTTATCTACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGG 788
|||||||||||.|||||.|||||||||.|.||.||.||||||||.|||.|.|..||.||.|..||.||.|||||
Sbjct 1036 GAACACACAATAGAAGAGTGGAAAGAATTGATATATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGG 1109
Query 789 TGTAGTAAAAGGACAGCCTTCTCCTT-----CAGGTGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTC 857
.||..||...||.|||||.||||||| ||||||||||||
Sbjct 1110 AGTTATACGGGGGCAGCCCTCTCCTTTAGCACAGGTGCAGCAG------------------------------- 1152
Query 858 GTCTGTCAATGACATCTCCTCCATGTCCACCGACCAGACCCTGGCATCTGACACTGACAGCAGCCTGGAAGCCT 931
Sbjct 1153 -------------------------------------------------------------------------- 1152
Query 932 CGGCAGGACCCCTGGGTTGTTGCAGG 957
Sbjct 1153 -------------------------- 1152