Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11088
• Subject: NM_001142571.2
• Aligned Length: 1044
• Identities: 627
• Gaps: 417

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGAGGAGATGATCCAGCTTCTCAGGAGCCACAGGAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAAGACAGTGGTGGACCTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGGCTTGTCTTACAAGACAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAGGGCGCACTCAAGTGGGAACCTGGGAGGACTGCAGCTGCCTCAGGTCCCCGCAGGGAGATCGTGGAGTGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTCAGGAATGCTCTGAAGAAGGCAGGACTTGGGCATGGAGGAACAGATGGACTTTCGCTGAATGCTTTCGATGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACGAGGCACTGCGGTCAGCACTTCACGTCTTGATAAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTG  370

Query    1  -----------------------------------------------ATGGCAGCAAATGTGGCCCATGGCCTG  27
                                                           |||||||||||||||||||||||||||
Sbjct  371  AAATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATGGCAGCAAATGTGGCCCATGGCCTG  444

Query   28  CAGCAAAACGTCCTATATGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAA  101
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAGCAAAACGTCCTATATGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAA  518

Query  102  AACCCAGGATGAGGAGGAACAGGCAGAAGCTCTCCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGA  175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AACCCAGGATGAGGAGGAACAGGCAGAAGCTCTCCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGA  592

Query  176  TGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGGTGACTGGTTCTTCAGGAACTGTGAAGGTG  249
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGGTGACTGGTTCTTCAGGAACTGTGAAGGTG  666

Query  250  GTGGTTGTGGACTCGGTCACTGCGGTGGTTTCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGCTTGGCCTTGAT  323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GTGGTTGTGGACTCGGTCACTGCGGTGGTTTCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGCTTGGCCTTGAT  740

Query  324  GATGCAGCTGGCCCGAGAGCTGAAGACCCTGGCCCGGGACCTTGGCATGGCAGTGGTGGTGACCAACCACATAA  397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GATGCAGCTGGCCCGAGAGCTGAAGACCCTGGCCCGGGACCTTGGCATGGCAGTGGTGGTGACCAACCACATAA  814

Query  398  CTCGAGACAGGGACAGCGGGAGGCTCAAACCTGCCCTCGGACGCTCCTGGAGCTTTGTGCCCAGCACTCGGATT  471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CTCGAGACAGGGACAGCGGGAGGCTCAAACCTGCCCTCGGACGCTCCTGGAGCTTTGTGCCCAGCACTCGGATT  888

Query  472  CTCCTGGACACCATCGAGGGAGCAGGAGCATCAGGCGGCCGGCGCATGGCGTGTCTGGCCAAATCTTCCCGACA  545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTCCTGGACACCATCGAGGGAGCAGGAGCATCAGGCGGCCGGCGCATGGCGTGTCTGGCCAAATCTTCCCGACA  962

Query  546  GCCAACAGGTTTCCAGGAGATGGTAGACATTGGGACCTGGGGGACCTCAGAGCAGAGTGCCACATTACAGGGTG  619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCCAACAGGTTTCCAGGAGATGGTAGACATTGGGACCTGGGGGACCTCAGAGCAGAGTGCCACATTACAGGGTG  1036

Query  620  ATCAGACA  627
            ||||||||
Sbjct 1037  ATCAGACA  1044