Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11109
- Subject:
- NM_001369673.1
- Aligned Length:
- 1354
- Identities:
- 450
- Gaps:
- 893
Alignment
Query 1 ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC 222
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------ATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC 63
Query 223 TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA 137
Query 297 AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 138 AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGG 211
Query 371 TGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 TGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAG 285
Query 445 GAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 GAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGA 359
Query 519 GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTT 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTG----- 428
Query 593 ACTTG-GCAGAAATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATCATCTACAGAGACCTGAAGCCGGA 665
.|||| |..|||..||| ||.|||.| ||..|.||.
Sbjct 429 GCTTGAGTGGAACGCTC---------------TTCACACC---AGTTGTTCC---------------------- 462
Query 666 GAATATCATGCTTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATG 739
Sbjct 463 -------------------------------------------------------------------------- 462
Query 740 GAACAGTCACACACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCCACAAT 813
Sbjct 463 -------------------------------------------------------------------------- 462
Query 814 CGTGCTGTGGATTGGTGGAGTTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACCCCCATTCACTGGGGA 887
Sbjct 463 -------------------------------------------------------------------------- 462
Query 888 GAATAGAAAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAAGAAGCCA 961
Sbjct 463 -------------------------------------------------------------------------- 462
Query 962 GAGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAA 1035
Sbjct 463 -------------------------------------------------------------------------- 462
Query 1036 GTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAA 1109
Sbjct 463 -------------------------------------------------------------------------- 462
Query 1110 ACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGACACCTGTCGACAGCC 1183
Sbjct 463 -------------------------------------------------------------------------- 462
Query 1184 CAGATGACTCAACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTCCATCTGTACTT 1257
Sbjct 463 -------------------------------------------------------------------------- 462
Query 1258 GAAAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGCAGCCCACGAAC 1331
Sbjct 463 -------------------------------------------------------------------------- 462
Query 1332 ACCTGTCAGTACTGCTATGTGC 1353
Sbjct 463 ---------------------- 462
