Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11177
- Subject:
- XR_426995.3
- Aligned Length:
- 2614
- Identities:
- 629
- Gaps:
- 1978
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCGCACTCGGCGGCCAGGCGCGGCGGGAGCGCGCCCTAGGGGGCGGGCACTGAAGCTGCGGCTTGCGGTTCAG 74
Query 1 -----------------------------------ATGGCTCACAGGCCGAAAAGGACTTTTCGGCAGCGCGCG 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGGTTCTAGGGCGCCGGGCGCTCGGGCCTCGGCCATGGCTCACAGGCCGAAAAGGACTTTTCGGCAGCGCGCG 148
Query 40 GCTGATTCCAGCGACAGCGATGGCGCCGAGGAGTCGCCTGCTGAGCCTGGGGCGCCGAGGGAACTTCCGGTCCC 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTGATTCCAGCGACAGCGATGGCGCCGAGGAGTCGCCTGCTGAGCCTGGGGCGCCGAGGGAACTTCCGGTCCC 222
Query 114 GGGTTCTGCGGAGGAAGAGCCGCCCTCTGGAGGAGGCCGCGCGCAGGTGGCGGGACTGCCCCACCGGATTCGGG 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 223 GGGTTCTGCGGAGGAAGAGCCGCCCTCTGGAGGAGGCCGCGCGCAGGTGGCGGGACTGCCCCACCGGGTTCGGG 296
Query 188 GCCCTCGTGGCCGGGGCCGGGTCTGGGCGAGCTCCCGGCGTGCCACCAAAGCGGCTCCCCGCGCGGACGAAGGC 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCCCTCGTGGCCGGGGCCGGGTCTGGGCGAGCTCCCGGCGTGCCACCAAAGCGGCTCCCCGCGCGGACGAAGGC 370
Query 262 TCAGAATCCAGAACCCTTGATGTGTCCACAGATGAAGAGGATAAAATACATCACTCCTCAGAAAGTAAGGATGA 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCAGAATCCAGAACCCTTGATGTGTCCACAGATGAAGAGGATAAAATACATCACTCCTCAGAAAGTAAGGATGA 444
Query 336 TCAGGGTTTGTCTTCTGACAGTTCTAGCTCTCTTGGAGAAAAAGAACTTTCATCAA------------------ 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCAGGGTTTGTCTTCTGACAGTTCTAGCTCTCTTGGAGAAAAAGAACTTTCATCAACAGTGTCCTCGTCTTTGT 518
Query 392 ------CAGTTAAGATCCCAGATGCAGCTTTTATTCAGGCAGCCCGCAGAAAACGTGAATTGGCCAGGGCCCAA 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTCCTTCAGTTAAGATCCCAGATGCAGCTTTTATTCAGGCAGCCCGCAGAAAACGTGAATTGGCCAGGGCCCAA 592
Query 460 GATGACTATATTTCTTTGGATGTACAACATACCTCCTCCATCTCTGGTATGAAGAGAGAGAGCGAAGATGACCC 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GATGACTATATTTCTTTGGATGTACAACATACCTCCTCCATCTCTGGTATGAAGAGAGAGAGCGAAGATGACCC 666
Query 534 TGAGAGTGAGCCTGATGACCATGAAAAGAGAATACCATTTACTCTAAGACCTCAAACACTTAGACAAAGGATGG 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGAGAGTGAGCCTGATGACCATGAAAAGAGAATACCATTTACTCTAAGACCTCAAACACTTAGACAAAGGATGG 740
Query 608 CTGAGGAATCAAGTATGGATTTACCAATATATGAAGAT------------------------------------ 645
|||||||||||| ||...|.|.|||||||.
Sbjct 741 CTGAGGAATCAA---------TAAGCAGAAATGAAGAAACAAGTGAAGAAAGTCAGGAAGATGAAAAGCAAGAT 805
Query 646 -------------------------------------------------------------------------- 645
Sbjct 806 ACTTGGGAACAACAGCAAATGAGGAAAGCAGTTAAAATCATAGAGGAAAGAGACATAGATCTTTCCTGTGGCAA 879
Query 646 -------------------------------------------------------------------------- 645
Sbjct 880 TGGATCTTCAAAAGTGAAGAAATTTGATACTTCCATTTCATTTCCGCCAGTAAATTTAGAAATTATAAAGAAGC 953
Query 646 -------------------------------------------------------------------------- 645
Sbjct 954 AATTAAATACTAGATTAACATTACTACAGGAAACTCACCGCTCACACCTGAGGGAGTATGAAAAATACGTACAA 1027
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1028 GATGTCAAAAGCTCAAAGAGTACCATCCAGAACCTAGAGAGTTCATCAAATCAAGCTCTAAATTGTAAATTCTA 1101
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1102 TAAAAGCATGAAAATTTATGTGGAAAATTTAATTGACTGCCTTAATGAAAAGATTATCAACATCCAAGAAATAG 1175
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1176 AATCATCCATGCATGCACTCCTTTTAAAACAAGCTATGACCTTTATGAAACGCAGGCAAGATGAATTAAAACAT 1249
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1250 GAATCAACGTATTTACAACAGTTATCACGCAAAGATGAGACATCCACAAGTGGAAACTTCTCAGTAGATGAAAA 1323
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1324 AACTCAGTGGATTTTAGAAGAGATTGAATCTCGAAGGACAAAAAGAAGACAAGCAAGGGTGCTTTCTGGGAATT 1397
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1398 GTAACCATCAGGAAGGAACATCTAGTGATGATGAACTGCCTTCAGCAGAGATGATTGACTTCCAAAAAAGCCAA 1471
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1472 GGTGACATTTTACAGAAACAGAAGAAAGTTTTTGAAGAAGTGCAAGATGATTTTTGTAACATCCAGAATATTTT 1545
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1546 GTTGAAATTTCAGCAATGGCGAGAAAAGTTTCCTGACTCCTATTATGAAGCTTTCATTAGTTTATGCATACCAA 1619
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1620 AGCTTTTAAATCCCCTAATACGAGTTCAGTTGATTGATTGGAATCCTCTTAAGTTGGAATCCACAGGTTTAAAA 1693
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1694 GAGATGCCATGGTTCAAATCTGTAGAAGAATTTATGGATAGCAGTGTGGAAGATTCAAAGAAGGAAAGTAGTTC 1767
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1768 AGATAAAAAAGTCTTGTCTGCAATCATCAACAAAACAATTATTCCCCGACTTACAGGATTTACTTAAATCCATT 1841
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1842 GTTTCAAGAATGAAAAAGGCAGTAGAAGATGATGTTTTTATTCCTCTGTATCCAAAGAGTGCTGTAGAAAACAA 1915
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1916 AACATCACCTCATTCAAAGTTCCAAGAAAGACAGTTCTGGTCAGGCCTAAAGCTCTTCCGCAATATTCTTCTTT 1989
Query 646 -------------------------------------------------------------------------- 645
Sbjct 1990 GGAATGGACTCCTTACAGATGACACCTTGCAAGAACTAGGACTAGGGAAGCTGCTAAATCGTTACCTTATTATA 2063
Query 646 -------------------------------------------------------------------------- 645
Sbjct 2064 GCACTTCTCAATGCCACACCTGGGCCAGATGTGGTTAAAAAGTGCAACCAGGTAGCAGCATGTCTACCAGAAAA 2137
Query 646 -------------------------------------------------------------------------- 645
Sbjct 2138 ATGGTTTGAAAATTCTGCCATGAGGACATCTATTCCACAGCTAGAAAACTTCATTCAGTTTTTATTGCAGTCTG 2211
Query 646 -------------------------------------------------------------------------- 645
Sbjct 2212 CACATAAATTATCTAGAAGTGAATTCAGGGATGAAGTCGAAGAAATAATTCTTATTTTGGTGAAAATAAAAGCT 2285
Query 646 -------------------------------------------------------------------------- 645
Sbjct 2286 TTGAATCAAGCAGAATCCTTCATAGGAGAGCATCACCTAGACCATCTTAAATCACTAATTAAAGAAGATTGAAT 2359
Query 646 -------------------------------------------------------------------------- 645
Sbjct 2360 AAACTTTATTGGAAAATGCTAAAATTTTAATATAGTTACACTCAGTTCCTTTGTTTGAGAAGAAGCTGGTGCCT 2433
Query 646 -------------------------------------------------------------------------- 645
Sbjct 2434 CTCTCTTCTTTATTCCCTGTAATAGAAGGTAGGATTTGAAAAAAAGCAGGACTCCACCTCTGTATTCCCCCGTG 2507
Query 646 -------------------------------------------------------------------------- 645
Sbjct 2508 CTTTACCTTCTGGCATCATGAAAAGCTGCCATGATTCTGTGGTGTTCTAAGGAATTAAATGCACTGGAGCTTTA 2581
Query 646 ------------------------ 645
Sbjct 2582 AGAGCTCAACGTGTTTCCCTTTGA 2605
