Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11236
- Subject:
- XM_011245888.2
- Aligned Length:
- 2409
- Identities:
- 352
- Gaps:
- 2025
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAACATTGACGACAAACTGGAAGGATTGTTTCTTAAATGTGGCGGCATAGACGAAATGCAGTCTTCCAGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATGGTTGTAATGGGTGGAGTGTCTGGCCAGTCCGCCGTGTCTGGAGAACTGCAGGAGTCAGTACTTCAAGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGTTTGCCTCACCAGGAGATCCTTGCTGCAGACGAAGTGTTACAAGAGAGTGAAATGAGACAACAGGATATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATATCCCATGATGAACTCATGGTCCACGAGGAGACAGTGAAAAATGACGAAGAGCAGATGGACACCCACGAGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTTCCCCAAGGACTGCAGTATGCACTCAATGTCCCTATAAGTGTAAAGCAGGAAATTACTTTTACTGATGTAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGAGCAACTGATGAGAGACAAAAAACAAGTCAGAGAGCCAGTAGACTTACAGAAAAAGAAGAAGCGGAAACAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCTCTCCTGCAAAAGTAAGAGACTGTGCTAAGATCCTTACAATAAATGAGGATGGATCACTTGGTTTGAAAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCTAAATCTCACGTTTGTGAGCACTGCAATGCTGCCTTTAGAACGAACTATCACTTACAGAGGCATGTCTTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCATACAGGCGAAAAACCGTTTCAATGTAGTCAATGTGACATGCGTTTCATACAGAAGTACCTGCTTCAGAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACGAGAAGATCCATACCGGTGAAAAACCATTTCGCTGTGATGAATGTGGTATGAGATTCATACAGAAATATCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATGGAAAGGCACAAAAGAACTCACAGTGGAGAGAAGCCTTATCAGTGTGAATACTGCTTACAGTATTTTTCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAACAGATCGTGTATTGAAACATAAACGTATGTGCCATGAAAATCACGACAAAAAACTAAACAGATGTGCCATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAAGGTGGCCTTCTGACATCAGAGGAAGATTCTGGCTTTTCTACATCACCAAAAGATAATTCACTGCCAAAAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAAAGGCAAAAAACTGAGAAGAAATCGTCTGGGATGGACAAGGAGAGTGTGCTGGACAAATCTGACCTGAAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGACAAGAACGATTACCTGCCTCTCTACTCGTCGAGCACTAAAGTAAAGGATGAGTACATGGTGGCAGAGTAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGTTGAGATGCCACACTCATCAGTGGGAGGCTCTCACCTAGAAGATGCATCTGGAGAAATACACCCACCCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTTGGTTCTCAAAAAAATCAATAGTAAGAGAAGTCTGAAGCAGCCCTTGGAGCAAAGTCAAACCATTTCACCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TATCCAGCTATGAAGACAGCAAAGTTTCCAAGTACGCTTTTGAGCTTGTGGATAAGCAGGCGTTACTGGACTCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAGGCAGTGCTGACATCGATCAAGTGGATAACTTGCAGGAGGGCCCCAGCAAACCTGTGCACAGCAGTACTAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTACGACGATGCCATGCAGTTTCTGAAGAAGAAGCGGTATCTTCAAGCTGCAAGTAACAACAGCAGGGAGTACG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACTGAATGTGGGCACCATAGCCTCTCAGCCTTCTGTGACACAAGCCGCCGTGGCCAGCGTCATTGATGAAAGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACCACAGCATCCATACTGGATTCCCAGGCACTGAATGTGGAGATTAAGAGCAATCATGACAAAAATGTTATCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGATGAGGTCCTGCAGACTCTGCTGGATCATTATTCCCACAAACCTAATGGACAGCATGAGATTTCCTTCAGCG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTGCAGATACTGAAGTGACTTCTAGCATATCAATCAATTCTTCCGATGTACCTGAAGTCACCCAGTCAGAGAAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTGGATCAAGCTCCCAAGCATCCTCATCAGATAAAGCTAACATGTTGCAGGAATACTCCAAGTTTCTGCAGCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGCTTTGGACAGAACTAGCCAAAACGATGCCTATTTGAATAGCCCGAGCCTTAACTTTGTGACTGACAACCAGA 1924
Query 1 ---------ATGCG-----------TTTCATACAGAAGTA------------CCTGC----------------T 26
||.|| ||.||||.|.|||.| |.||| .
Sbjct 1925 CCCTTCCAAATCCGCCAGCATTCTCTTCCATAGACAAGCAAGTCTATGCAGCCATGCCCATCAATAGCTTTCGA 1998
Query 27 TCAGAGACATG------------AGAA------------------------GATTCATACT-GGTG------AA 57
|||| || ||| |||| ||.|.|||.| |||| |.
Sbjct 1999 TCAG-GA-ATGAATTCTCCACTAAGAACAACTCCAGATAAGTCCCACTTTGGACTAATAGTCGGTGACTCACAG 2070
Query 58 AAACCATTTCGCTGTGATGAATGTGGTGATGAGACAAACCATGCTTCTGCCACATCAACA-CAGGACTTTCTGG 130
.|.||.||||.||.| |..|||||.|||||||||||.||.||||||||.|||||| || ||||||.|||
Sbjct 2071 CACCCGTTTCCCTTT------TCAGGTGACGAGACAAACCACGCCTCTGCCACGTCAACAGCA-GACTTTTTGG 2137
Query 131 ATCAAGTGACTTCTCAGAAGAAAGCTGAGGCCCAGCCTGTCCACCAAGCTTACCAAATGAGCTCCTTTGAACAG 204
|||||||.|||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||.|||
Sbjct 2138 ATCAAGTCACTTCTCAGAAGAAAGCTGAGGCACAGCCTGTCCACCAGGCTTACCAAATGAGCTCCTTTGAGCAG 2211
Query 205 CCCTTCCGTGCTCCCTATCATGGATCAAGAGCTGGAATAGCTACTCAATTTAGCACTGCCAATGGACAGGTGAA 278
||||||||||||||.|||||||||||.||||||||||||||.|||||.||||||||||||||||||||||||||
Sbjct 2212 CCCTTCCGTGCTCCATATCATGGATCCAGAGCTGGAATAGCAACTCAGTTTAGCACTGCCAATGGACAGGTGAA 2285
Query 279 CCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGA 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2286 CCTTCGGGGACCAGGGACAAGTGCTGAATTTTCAGAATTTCCCTTGGTGAATGTAAATGATAATAGAGCTGGGA 2359
Query 353 TGACATCTTCACCTGATGCCACAACTGGCCAGACTTTTGGC 393
|||||||||||||.|||||||||||||||||||||||||||
Sbjct 2360 TGACATCTTCACCAGATGCCACAACTGGCCAGACTTTTGGC 2400
