Construct: ORF ccsbBroad304_11236

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007618.1_s304c1, BRDN0000411464
Derived from:
ccsbBroadEn_11236
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF148 (7707)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11236
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7707 ZNF148 zinc finger protein 148 NM_001348434.2 16% 14.5% (many diffs)
2 human 7707 ZNF148 zinc finger protein 148 NM_001348424.1 15.2% 13.7% (many diffs)
3 human 7707 ZNF148 zinc finger protein 148 NM_001348425.2 15.2% 13.7% (many diffs)
4 human 7707 ZNF148 zinc finger protein 148 NM_001348426.2 15.2% 13.7% (many diffs)
5 human 7707 ZNF148 zinc finger protein 148 NM_001348427.2 15.2% 13.7% (many diffs)
6 human 7707 ZNF148 zinc finger protein 148 NM_001348428.2 15.2% 13.7% (many diffs)
7 human 7707 ZNF148 zinc finger protein 148 NM_001348429.2 15.2% 13.7% (many diffs)
8 human 7707 ZNF148 zinc finger protein 148 NM_001348430.2 15.2% 13.7% (many diffs)
9 human 7707 ZNF148 zinc finger protein 148 NM_001348431.2 15.2% 13.7% (many diffs)
10 human 7707 ZNF148 zinc finger protein 148 NM_001348432.2 15.2% 13.7% (many diffs)
11 human 7707 ZNF148 zinc finger protein 148 NM_001348433.2 15.2% 13.7% (many diffs)
12 human 7707 ZNF148 zinc finger protein 148 NM_021964.2 15.2% 13.7% (many diffs)
13 mouse 22661 Zfp148 zinc finger protein 148 XM_006522104.3 22.4% 20.9% (many diffs)
14 mouse 22661 Zfp148 zinc finger protein 148 XM_006522103.3 15.5% 14.4% (many diffs)
15 mouse 22661 Zfp148 zinc finger protein 148 NM_011749.4 14.7% 13.6% (many diffs)
16 mouse 22661 Zfp148 zinc finger protein 148 XM_006522102.3 14.7% 13.6% (many diffs)
17 mouse 22661 Zfp148 zinc finger protein 148 XM_017316980.1 14.7% 13.6% (many diffs)
18 mouse 22661 Zfp148 zinc finger protein 148 XM_006522098.3 14.6% 13.5% (many diffs)
19 mouse 22661 Zfp148 zinc finger protein 148 XM_006522099.3 14.6% 13.5% (many diffs)
20 mouse 22661 Zfp148 zinc finger protein 148 XM_006522100.3 14.6% 13.5% (many diffs)
21 mouse 22661 Zfp148 zinc finger protein 148 XM_006522101.3 14.6% 13.5% (many diffs)
22 mouse 22661 Zfp148 zinc finger protein 148 XM_011245888.2 14.6% 13.5% (many diffs)
23 mouse 22171 Tyms thymidylate synthase XR_001784663.1 9.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
459
ORF length:
393
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcg tttcatacag aagtacctgc ttcagagaca tgagaagatt catactggtg
121aaaaaccatt tcgctgtgat gaatgtggtg atgagacaaa ccatgcttct gccacatcaa
181cacaggactt tctggatcaa gtgacttctc agaagaaagc tgaggcccag cctgtccacc
241aagcttacca aatgagctcc tttgaacagc ccttccgtgc tccctatcat ggatcaagag
301ctggaatagc tactcaattt agcactgcca atggacaggt gaaccttcgg ggaccaggga
361caagtgctga attttcagaa tttcccttgg tgaatgtaaa tgataataga gctgggatga
421catcttcacc tgatgccaca actggccaga cttttggcta cccaactttc ttgtacaaag
481tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
541gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)