Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11274
- Subject:
- XM_006506188.3
- Aligned Length:
- 2344
- Identities:
- 1221
- Gaps:
- 974
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCATCAAACAGGAGTCAGAATCCTCATGGACTGAAGCAGATTGGTCTTGACCAGATCTGGGATGACCTCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCTGGAATTCAGCAGGTGTATACCAGACAAAGCATGGCAAAGTCCAGATACATGGAACTCTACACTCATGTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATAACTACTGTACTAGTGTGCATCAGTCCAACCAAGCCCGGGGTGCTGGAGTCCCTCCTTCCAAGTCAAAAAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCAGACTCCTGGGGGAGCTCAGTTTGTTGGCTTGGAGTTATACAAGCGATTGAAGGAATTTTTGAAGAATTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGACAAATCTTCTTAAGGATGGAGAAGATTTAATGGATGAGAGTGTCCTGAAGTTCTACACTCAGCAGTGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGATTACCGATTCTCCAGCAAAGTGCTGAATGGAATCTGTGCCTACCTCAATAGACATTGGGTTCGCCGTGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTGATGAAGGACGAAAAGGAATATATGAAATCTATTCACTTGCATTGGTGACATGGAGAGATTGTTTGTTCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCATTGAATAAACAGGTAACAAATGCTGTTTTAAAGTTGATTGAAAAGGAAAGAAATGGAGAAACCATCAATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAGACTGATTAGTGGAGTTGTACAATCTTATGTGGAATTGGGGCTGAATGAAGATGATGCATTTGCAAAGGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTACGTTAACAGTGTATAAAGAATCCTTTGAATCTCAATTTTTGGCTGACACAGAGAGATTTTATACCAGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGTACTGAATTCTTACAGCAGAACCCAGTTACTGAATATATGAAAAAGGCTGAAGCTCGTTTGCTTGAGGAAC 814
Query 1 ---------------------------------------ATG--CAAGCTCGGAA-----------TC------ 16
||| |.|||.||||| ||
Sbjct 815 AGCGGAGAGTTCAGGTTTACCTCCACGAGAGCACACAAGATGAACTAGCACGGAAATGTGAGCAGGTCCTCATT 888
Query 17 ----AATATTT---AGTTTT-------GAGTGTGGAGAATAGATTG--------------------TTT----- 51
||.|.|| |.|||| |||| |..|||||..|||| |||
Sbjct 889 GAAAAACACTTGGAAATTTTTCACACAGAGT-TTCAGAATTTATTGGATGCTGACAAGAATGAAGATTTGGGCC 961
Query 52 -------TTTTCTTTTATATATATAAACAAAATGTCCTATGTG-TTTCAACGATGGTACCAAAAGTATTTCTTG 117
|..||||.|||.||.| |..||..|||.||||.|.| .||.|| ||||.|| ||.|
Sbjct 962 GCATGTATAATCTTGTATCTAGA-ATTCAGGATGGCCTAGGAGAATTGAA----------AAAACTA---CTAG 1021
Query 118 ---CTCTTATCTCTTAA-------CT--------TTGA---------------------AAAGGACCCCAAAAT 152
|.|.||| ||.||| || |||| |||.||||||||.||
Sbjct 1022 AGACACATAT-TCATAATCAGGGTCTTGCAGCAATTGAGAAGTGTGGAGAAGCTGCTCTAAATGACCCCAAGAT 1094
Query 153 GTATGTACAGACAGTGCTTGATGTTCATAGAAAATACAATGCCCTGGTAATGTCTGCATTCAACAATGACGCTG 226
||||||.|||||||||||.||||||||||.||||||||||||||||||.|||||.|||||||||||.||.||||
Sbjct 1095 GTATGTGCAGACAGTGCTGGATGTTCATAAAAAATACAATGCCCTGGTGATGTCAGCATTCAACAACGATGCTG 1168
Query 227 GCTTTGTGGCTGCTCTTGATAAGGCTTGTGGTCGCTTCATAAACAACAACGCGGTTACCAAGATGGCCCAATCA 300
||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 1169 GCTTCGTAGCTGCTCTTGATAAGGCTTGTGGTCGCTTCATAAACAACAATGCGGTTACCAAAATGGCCCAGTCA 1242
Query 301 TCCAGTAAATCCCCTGAGTTGCTGGCTCGATACTGTGACTCCTTGTTGAAGAAAAGTTCCAAGAACCCAGAGGA 374
||||||||||||||||||.||||.|||||.|||||||||||||||.|||||||||||||||||||||||||.||
Sbjct 1243 TCCAGTAAATCCCCTGAGCTGCTTGCTCGGTACTGTGACTCCTTGCTGAAGAAAAGTTCCAAGAACCCAGAAGA 1316
Query 375 GGCAGAACTAGAAGACACACTCAATCAAGTGATGGTTGTCTTCAAGTACATAGAAGACAAAGACGTATTTCAGA 448
||||||||||||||||||.|||||||||||||||||.||||||||||||||.||.||||||||.||||||||||
Sbjct 1317 GGCAGAACTAGAAGACACCCTCAATCAAGTGATGGTGGTCTTCAAGTACATCGAGGACAAAGATGTATTTCAGA 1390
Query 449 AGTTCTATGCGAAGATGCTCGCCAAGAGGCTCGTCCACCAGAACAGTGCAAGTGACGATGCCGAAGCCAGCATG 522
||||||||||.||||||||.||||||||.||.||.||.||.||||||||.|||||||||||.|||||.||||||
Sbjct 1391 AGTTCTATGCAAAGATGCTTGCCAAGAGACTGGTACATCAAAACAGTGCGAGTGACGATGCTGAAGCAAGCATG 1464
Query 523 ATCTCCAAGTTAAAGCAAGCTTGCGGGTTCGAGTACACCTCTAAACTTCAGCGCATGTTTCAAGACATTGGCGT 596
|||||||||||||||||||||||.||.||.||||||||.||.|||||||||||.|||||||||||||||||.||
Sbjct 1465 ATCTCCAAGTTAAAGCAAGCTTGTGGTTTTGAGTACACTTCCAAACTTCAGCGAATGTTTCAAGACATTGGTGT 1538
Query 597 GAGCAAAGATCTGAACGAGCAATTCAAAAAGCACTTGACAAACTCAGAACCCCTAGACTTGGATTTCAGCATTC 670
.||||||||||||||.||.||.||||||||.|||.||||.||.||||||||.||.||||||||.|||||.||||
Sbjct 1539 AAGCAAAGATCTGAATGAACAGTTCAAAAAACACCTGACGAATTCAGAACCGCTGGACTTGGACTTCAGTATTC 1612
Query 671 AAGTGCTGAGCTCCGGGTCCTGGCCCTTCCAGCAGTTTTGTACATTTGCCTTGCCGTCAGAGTTGGAACGTAGT 744
|.||.|||||.||.||.||.||||||||.|||||||.|||.||.|||||||||||||||||||||||.||.|||
Sbjct 1613 AGGTCCTGAGTTCTGGATCGTGGCCCTTTCAGCAGTCTTGCACGTTTGCCTTGCCGTCAGAGTTGGAGCGCAGT 1686
Query 745 TATCAGCGATTCACAGCTTTCTACGCCAGCCGCCACAGTGGCCGAAAATTGACGTGGTTATATCAGTTGTCTAA 818
|||||||||||.||||||||||||||||||||.|||||||||.||||||||||.|||||.|||||..||||.||
Sbjct 1687 TATCAGCGATTTACAGCTTTCTACGCCAGCCGTCACAGTGGCAGAAAATTGACATGGTTGTATCAACTGTCCAA 1760
Query 819 AGGAGAATTGGTAACTAACTGCTTCAAAAACAGATATACTTTGCAGGCGTCGACATTCCAGATGGCTATCCTGC 892
|||.|||.|.||.|||||||||||||||||||||||.||||||||||||||.|||||.||||||||.|||||||
Sbjct 1761 AGGGGAACTAGTCACTAACTGCTTCAAAAACAGATACACTTTGCAGGCGTCCACATTTCAGATGGCAATCCTGC 1834
Query 893 TTCAGTACAACACGGAAGATGCCTACACTGTGCAGCAGCTGACCGACAGCACTCAAATTAAAATGGACATTTTG 966
|||||||.|||||.|||||.|||||.||||||||||||.||||.|||||||||||.||||||||||||||||||
Sbjct 1835 TTCAGTATAACACAGAAGACGCCTATACTGTGCAGCAGTTGACTGACAGCACTCAGATTAAAATGGACATTTTG 1908
Query 967 GCGCAAGTTTTACAGATTTTATTAAAGTCGAAGCTATTGGTCTTGGAAGATGAAAATGCAAATGTTGATGAGGT 1040
||.|||||..|||||||||||.|.||||||||..|..|||||||.||||||||||||||.||||||||||||||
Sbjct 1909 GCACAAGTCCTACAGATTTTACTGAAGTCGAAATTGCTGGTCTTAGAAGATGAAAATGCCAATGTTGATGAGGT 1982
Query 1041 GGAATTGAAGCCAGATACCTTAATAAAATTATATCTTGGTTATAAAAATAAGAAATTAAGGGTTAACATCAATG 1114
|||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||||
Sbjct 1983 GGAATTGAAGCCAGACACCTTAATAAAGTTATATCTTGGTTATAAAAATAAGAAATTGAGGGTTAATATCAATG 2056
Query 1115 TGCCAATGAAAACCGAACAGAAGCAGGAACAAGAAACCACACACAAAAACATCGAGGAAGACCGCAAACTACTG 1188
|.|||||||||||.|||||||||||||||||||||||.|||||||||||.||.|||||||||||||||||||||
Sbjct 2057 TACCAATGAAAACTGAACAGAAGCAGGAACAAGAAACTACACACAAAAATATAGAGGAAGACCGCAAACTACTG 2130
Query 1189 ATTCAGGCGGCCATCGTGAGAATCATGAAGATGAGGAAGGTTCTGAAACACCAGCAGTTACTTGGCGAGGTCCT 1262
|||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||.|||||
Sbjct 2131 ATTCAGGCGGCCATCGTGAGAATCATGAAAATGAGGAAGGTCCTGAAACACCAGCAGTTACTTGGTGAAGTCCT 2204
Query 1263 CACTCAGCTGTCCTCCAGGTTCAAACCTCGAGTCCCTGTGATCAAGAAATGCATTGACATTCTAATTGAGAAAG 1336
|||||||||.||||||||||||||||||||.|||||.||||||||||||||||||||.|||||.||.||.||||
Sbjct 2205 CACTCAGCTCTCCTCCAGGTTCAAACCTCGGGTCCCGGTGATCAAGAAATGCATTGATATTCTCATCGAAAAAG 2278
Query 1337 AATATTTGGAGCGAGTGGATGGTGAAAAGGACACCTACAGTTACTTGGCT 1386
||||||||||||||||.||||||||.||||||||||||||||||||||||
Sbjct 2279 AATATTTGGAGCGAGTCGATGGTGAGAAGGACACCTACAGTTACTTGGCT 2328
