Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11285
- Subject:
- XM_017316030.1
- Aligned Length:
- 4125
- Identities:
- 600
- Gaps:
- 3474
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTACGCAGATAGAGCTCAGAAGCATGGCATGGATGAATTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGATCACAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATGAGTATTGCGCCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCAGAAAATGGCGCG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAGGCCTGATGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAGTTCTGCTGGAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCTACTCTCTCACTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAAATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGGGAAAAAGAGAGAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGTATGAGCATCCTGTCTTCTGCTTGGCCTCCCAAGTGATGGATTTAACCATTCAGAATCAAAAGGATGCAGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACTGCAACAAAACGAGGAGCACCACGCCGAGGGGAAAGAGGCCTTTGCGTGGTGGTCAGACTTAATGGTGGAGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGCCTTAGAGGTGCAACCCCCAGACACGTGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GACAGTTTCCCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACAGACTATAATTTGTGCAATGGAAAGTTTCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCTCCATTGCACAAT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTAACCTACCCAATGTGAAC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAACATCCCTCTAGGCATCCCACAGATGCCCAC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTTTTCGGCACCGTCATGGATGGCTGCTATATATGATGCTGATAATGGATCAGGTACATCAGAAGATTTGTTCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAAGAGTTTGGAAAACACTTAGAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAAAAGAACCAGGATTGCATTTGAAGTTAA 3404
Query 1 -------------------------------------------------------ATGTTTAATGTTATGGTTG 19
|||||||||||||||||||
Sbjct 3405 GCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTG 3478
Query 20 ATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGTTTGCTAAAATGTGGCATCAATAC 93
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3479 ATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGA---------------GCATCAATAC 3537
Query 94 CATTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAGTTCGTTAC 167
||||||||||||||.|||||||||||||||||.||||||||||||||.|||||.|||||.||||||||.||.||
Sbjct 3538 CATTCAAAAATAGATGAACTAATTGAAGAAACCGTTAAAGAAATGATCACACTTTTGGTGGCAAAGTTTGTAAC 3611
Query 168 TATCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCTGTCATTTA 241
|||.||||||||.||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||.|
Sbjct 3612 TATATTGGAAGGCGTACTGGCAAAGTTATCCAGATATGACGAGGGGACTTTGTTTTCTTCGTTTCTGTCATTCA 3685
Query 242 CCGTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTC 315
|.|||||||||||||||||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 3686 CGGTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTC 3759
Query 316 GTCCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACATAGAAAGGTTATTTGATCAATG 389
|||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 3760 GTCCGCCATTCTCAGGATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATATAGAAAGGTTATTTGATCAATG 3833
Query 390 GTACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATATTTATCAGT 463
|||||||||||||||||||.|.||||||||.|||.||||.|||.||||||||.|.|||||.||.|||||.|||.
Sbjct 3834 GTACAACAGCTCCATGAACATCATCTGCACGTGGCTGACCGACAGGATGGACCTGCAGCTCCACATTTACCAGC 3907
Query 464 TGAAAACACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCCACCTTA 537
|||||||.||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 3908 TGAAAACCCTGATCAGGATGGTAAAGAAAACCTATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCCACCTTA 3981
Query 538 AACAGCAAGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGG 611
|||||||||||||||||.||.|||||.|||||||||||||||||||||||.|||||.|||||||||||.|||||
Sbjct 3982 AACAGCAAGACCTATGAGACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGGTGG 4055
Query 612 GGGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT 666
|||..|.||.||.|||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 4056 GGGCTTACAAGGTATCAGCATGAAGGACAGTGATGAGGAAGATGAAGAAGATGAT 4110
