Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11285
- Subject:
- XM_017316033.1
- Aligned Length:
- 4050
- Identities:
- 600
- Gaps:
- 3399
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTACGCAGATAGAGCTCAGAAGCATGGCATGGATGAATTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGATCACAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATGAGTATTGCGCCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCAGAAAATGGCGCG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAGGCCTGATGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAGTTCTGCTGGAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCTACTCTCTCACTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAAATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGAAAATGTAGGCCGCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGTACTGCAACAAAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGGAGCACCACGCCGAGCCACATGTTGATAAAGGAGAAGCCTTTGCGTGGTGGTCAGACTTAATGGTGGAGCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGCCTTAGAGGTGCAACCCCCAGACACGTGGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACAGTTTCCCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACAGACTATAATTTGTGCAATGGAAAGTTTCAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGATGGAGTCCTCCATTGCACAATC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAGAGTTTAACCAGTAACCTACCCAATGTGAACC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAACATCCCTCTAGGCATCCCACAGATGCCCACT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTTTCGGCACCGTCATGGATGGCTGCTATATATGATGCTGATAATGGATCAGGTACATCAGAAGATTTGTTCTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAAGAGTTTGGAAAACACTTAGAGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAAAAGAACCAGGATTGCATTTGAAGTTAAG 3330
Query 1 ------------------------------------------------------ATGTTTAATGTTATGGTTGA 20
||||||||||||||||||||
Sbjct 3331 CTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCACCATGTTTAATGTTATGGTTGA 3404
Query 21 TGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGTTTGCTAAAATGTGGCATCAATACC 94
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3405 TGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGA---------------GCATCAATACC 3463
Query 95 ATTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAGTTCGTTACT 168
|||||||||||||.|||||||||||||||||.||||||||||||||.|||||.|||||.||||||||.||.|||
Sbjct 3464 ATTCAAAAATAGATGAACTAATTGAAGAAACCGTTAAAGAAATGATCACACTTTTGGTGGCAAAGTTTGTAACT 3537
Query 169 ATCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCTGTCATTTAC 242
||.||||||||.||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||.||
Sbjct 3538 ATATTGGAAGGCGTACTGGCAAAGTTATCCAGATATGACGAGGGGACTTTGTTTTCTTCGTTTCTGTCATTCAC 3611
Query 243 CGTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCG 316
.|||||||||||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 3612 GGTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCCGACGCCTACGTGACTTTCG 3685
Query 317 TCCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACATAGAAAGGTTATTTGATCAATGG 390
||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 3686 TCCGCCATTCTCAGGATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATATAGAAAGGTTATTTGATCAATGG 3759
Query 391 TACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATATTTATCAGTT 464
||||||||||||||||||.|.||||||||.|||.||||.|||.||||||||.|.|||||.||.|||||.|||.|
Sbjct 3760 TACAACAGCTCCATGAACATCATCTGCACGTGGCTGACCGACAGGATGGACCTGCAGCTCCACATTTACCAGCT 3833
Query 465 GAAAACACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCCACCTTAA 538
||||||.||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct 3834 GAAAACCCTGATCAGGATGGTAAAGAAAACCTATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCCACCTTAA 3907
Query 539 ACAGCAAGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGTGAAGGTGGG 612
||||||||||||||||.||.|||||.|||||||||||||||||||||||.|||||.|||||||||||.||||||
Sbjct 3908 ACAGCAAGACCTATGAGACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGAGGGTGGG 3981
Query 613 GGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT 666
||..|.||.||.|||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 3982 GGCTTACAAGGTATCAGCATGAAGGACAGTGATGAGGAAGATGAAGAAGATGAT 4035
