Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11343
- Subject:
- NM_005093.3
- Aligned Length:
- 1857
- Identities:
- 715
- Gaps:
- 1113
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTAAAGAATCTGGAATAAGCTTGAAAGAAATACAGGTCCTGGCAAGGCAATGGAAAGTTGGTCCTGAGAA 74
Query 1 -------------ATGCATGGATCGCCTGTGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCACCATGCCAC 61
||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAGGGTGCCAGCGATGCCTGGATCGCCTGTGGAAGTGAAGATACAGTCCAGATCCTCACCTCCCACCATGCCAC 148
Query 62 CCCTCCCACCAATAAATCCTGGAGGACCGAGGCCAGTGTCCTTCACTCCTACTGCATTAAGCAATGGCATCAAC 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCTCCCACCAATAAATCCTGGAGGACCGAGGCCAGTGTCCTTCACTCCTACTGCATTAAGCAATGGCATCAAC 222
Query 136 CATTCTCCTCCTACCCTGAATGGTGCCCCATCACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTCCACATC 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATTCTCCTCCTACCCTGAATGGTGCCCCATCACCGCCACAGAGATTCAGCAATGGTCCTGCCTCCTCCACATC 296
Query 210 ATCTGCACTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCTTA 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATCTGCACTCACAAATCAGCAATTGCCAGCCACTTGTGGTGCTCGACAACTCAGCAAGTTGAAACGCTTTCTTA 370
Query 284 CCACTCTGCAACAGTTTGGCAATGACATCTCCCCTGAGATTGGGGAGAAGGTGCGGACTCTTGTTCTTGCACTG 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCACTCTGCAACAGTTTGGCAATGACATCTCCCCTGAGATTGGGGAGAAGGTGCGGACTCTTGTTCTTGCACTG 444
Query 358 GTGAACTCAACAGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGAAGCCACAAACTTTCCCCTTCGTCCTTT 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGAACTCAACAGTGACAATTGAGGAATTCCACTGTAAGCTCCAAGAAGCCACAAACTTTCCCCTTCGTCCTTT 518
Query 432 TGTGATTCCATTTCTCAAGGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGCCAAGC 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGTGATTCCATTTCTCAAGGCCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCACTGCGCTCGGGCGGCCAAGC 592
Query 506 AGACCCCATCCCAGTACCTGGCTCAGCACGAACACCTTCTGCTCAACACAAGCATTGCATCGCCTGCTGACTCG 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGACCCCATCCCAGTACCTGGCTCAGCACGAACACCTTCTGCTCAACACAAGCATTGCATCGCCTGCTGACTCG 666
Query 580 TCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAGTCCAGAGAG-------CTGCATA------A 640
||||||||||||||||||||||||||||||||||||||||||||||||||||| ..|.||| |
Sbjct 667 TCAGAGTTGCTCATGGAGGTGCACGGAAATGGGAAGAGGCCCAGTCCAGAGAGGAGAGAAGAGAATAGTTTTGA 740
Query 641 TACATCTAAAAT--CT-ATGGGAGTAGCTTCCAGACA--TGAGTATTTTTCGGGAACTCTTCAGATGCCTGCAC 709
||.|...|.||| || .|| |||.|||.|.|| .|||||| |.|| |.|||| .|||||.|
Sbjct 741 TAGAGACACAATTGCTCCTG-----AGCCTCCTGCCAAGAGAGTAT-------GTAC-CATCAG--CCCTGCTC 799
Query 710 ACCCGGTA-AGAAACT-CTACTCTAGAGAATTTATGGGTCGACTGTTCCAGAAGCCTCAGGAGTACAG------ 775
|.|||.| || | ||.|||| .|||||.|| |||||.||.|.|.|
Sbjct 800 -CTCGGCACAG----TCCTGCTCT----------------CACTGTGCC-----CCTCATGAATCCCGGGGGCC 847
Query 776 -------TTCTGCCTTTTCCT----------------------------------------------------- 789
|.||.|| |||
Sbjct 848 AATTCCATCCTACC----CCTCCACCTCTTCAGCATTACACCTTAGAGGATATTGCAACTTCTCACCTGTATCG 917
Query 790 -------------------------------------------------------------------------- 789
Sbjct 918 GGAACCCAACAAGATGCTAGAGCATCGAGAAGTTCGTGATAGACACCACAGTCTTGGTCTAAATGGAGGCTATC 991
Query 790 -------------------------------------------------------------------------- 789
Sbjct 992 AAGATGAGTTGGTAGATCATCGTTTGACAGAAAGGGAATGGGCTGATGAATGGAAACATCTTGACCATGCGCTG 1065
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1066 AATTGCATTATGGAAATGGTAGAGAAAACAAGGCGCTCTATGGCAGTTCTGCGGCGCTGTCAGGAATCAGATCG 1139
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1140 TGAAGAACTCAACTACTGGAAAAGACGGTACAATGAAAACACAGAGCTGAGGAAAACGGGGACCGAGTTGGTCT 1213
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1214 CCAGGCAGCACAGCCCTGGGAGTGCAGATTCTCTCAGCAATGATTCTCAGAGAGAGTTCAACAGCAGGCCAGGT 1287
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1288 ACAGGATACGTACCTGTGGAGTTTTGGAAAAAAACAGAAGAAGCTGTGAATAAGGTGAAAATTCAGGCCATGTC 1361
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1362 AGAAGTACAGAAGGCCGTCGCTGAGGCAGAGCAGAAAGCCTTTGAAGTGATTGCAACAGAGAGAGCACGAATGG 1435
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1436 AGCAAACCATAGCGGATGTCAAGCGGCAGGCCGCAGAGGATGCTTTCCTCGTCATCAATGAGCAAGAGGAGTCC 1509
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1510 ACGGAGAACTGCTGGAACTGTGGCCGCAAAGCCAGCGAGACATGCAGTGGCTGCAATATCGCGCGATACTGTGG 1583
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1584 CTCTTTCTGCCAGCACAAGGACTGGGAGCGGCACCACCGCCTCTGTGGTCAGAACCTGCATGGCCAGAGCCCCC 1657
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1658 ACGGCCAGGGCCGGCCGCTGCTTCCTGTAGGCAGGGGCTCCTCTGCCAGGTCCGCCGACTGCAGCGTGCCCAGC 1731
Query 790 -------------------------------------------------------------------------- 789
Sbjct 1732 CCAGCCCTCGACAAGACCTCGGCAACCACATCGCGTTCCTCAACACCTGCTTCTGTGACAGCTATCGACACCAA 1805
Query 790 ------- 789
Sbjct 1806 CGGACTC 1812
