Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11391
• Subject: NM_001270411.2
• Aligned Length: 1075
• Identities: 734
• Gaps: 326

Alignment

Query    1  ATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACC  74

Query   75  CATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTT  148

Query  149  GGGACACAGGGGTCTTTCGAGGCCAGGTGTATTTCGAGCCTCAGTACCACGCAGAAATGTGCTTCCTCTCTTGG  222
            |||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGACACAGGGGTCTTTCGAGGCCAGGTGTATTTCAAGCCTCAGTACCACGCAGAAATGTGCTTCCTCTCTTGG  222

Query  223  TTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGA  296

Query  297  CTGTGTGGCGAAGCTGGCCGAATTCCTGTCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  297  CTGTGTGGCGAAGCTGGCCGAATTCCTGTCTGAGCACCCCAATGTCACCCTGACCATCTCTGCCGCCCGCCTCT  370

Query  371  ACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGCAGGCTGAGTCAGGCAGGAGCCCGCGTGAAGATCATG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  371  ACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGCAGGCTGAGTCAGGCAGGAGCCCGCGTGACGATCATG  444

Query  445  GACTATGAAGAATTTGCATACTGCTGGGAAAACTTTGTGTACAATGAAGGTCAGCAATTCATGCCTTGGTACAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACTATGAAGAATTTGCATACTGCTGGGAAAACTTTGTGTACAATGAAGGTCAGCAATTCATGCCTTGGTACAA  518

Query  519  ATTCGATGAAAATTATGCATTCCTGCACCGCACGCTAAAGGAGATTCTCAGGCTA------------AGA----  576
            |||||||||||||||||||||||||||||||||||||||||||||||||| |.||            |||    
Sbjct  519  ATTCGATGAAAATTATGCATTCCTGCACCGCACGCTAAAGGAGATTCTCA-GATACCTGATGGATCCAGACACA  591

Query  577  ---------ATCTT---------CTCTGTGG--CTTTTACGGCCGCC---------------ATGCGGAGCTGC  615
                     |.|||         |.||.|||  |||..|||| ||||               |||.||.|..||
Sbjct  592  TTCACTTTCAACTTTAATAATGACCCTTTGGTCCTTCGACGG-CGCCAGACCTACTTGTGCTATGAGGTGGAGC  664

Query  616  GCTTCT------TGG-ACCTGGTTCC---------------------TTCTTTGC----AGTTGGACCCGGCCC  657
            ||  ||      ||| ||||||.|||                     ||||.|||    |||||||||||||||
Sbjct  665  GC--CTGGACAATGGCACCTGGGTCCTGATGGACCAGCACATGGGCTTTCTATGCAACGAGTTGGACCCGGCCC  736

Query  658  AGATCTACAGGGTCACTTGGTTCATCTCCTGGAGCCCCTGCTTCTCCTGGGGCTGTGCCGGGGAAGTGCGTGCG  731
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  737  AGATCTACAGGGTCACTTGGTTCATCTCCTGGAGCCCCTGCTTCTCCTGGGGCTGTGCCGGGGAAGTGCGTGCG  810

Query  732  TTCCTTCAGGAGAACACACACG----------------------------------------------------  753
            ||||||||||||||||||||||                                                    
Sbjct  811  TTCCTTCAGGAGAACACACACGTGAGACTGCGCATCTTCGCTGCCCGCATCTATGATTACGACCCCCTATATAA  884

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct  885  GGAGGCGCTGCAAATGCTGCGGGATGCTGGGGCCCAAGTCTCCATCATGACCTACGATGAGTTTGAGTACTGCT  958

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct  959  GGGACACCTTTGTGTACCGCCAGGGATGTCCCTTCCAGCCCTGGGATGGACTAGAGGAGCACAGCCAAGCCCTG  1032

Query  754  ---------------------------------------  753
                                                   
Sbjct 1033  AGTGGGAGGCTGCGGGCCATTCTCCAGAATCAGGGAAAC  1071