Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11391
Subject:
NM_152426.4
Aligned Length:
1172
Identities:
656
Gaps:
433

Alignment

Query    1  ATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACC  74

Query   75  CATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CATCCTCTATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTT  148

Query  149  GGGACACAGGGGTCTTTCGAGGCC------------------------------------AGGTGTATTTCGAG  186
            ||||||||||||||||||||||||                                    |||||||||||..|
Sbjct  149  GGGACACAGGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGG  222

Query  187  CCTCAGTACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCA  260
            ..|.||.||||||||||||||||||||.|.|||||||||||||||||||..|||||||||.|||.|.|.|||||
Sbjct  223  TTTGAGAACCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCA  296

Query  261  GATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCTGTCTGAGCACC  334
            ||||||||||||||||||.||||.||||||||.|..||||||||.||||.||.||.|||||.||.|||||||||
Sbjct  297  GATCACCTGGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACC  370

Query  335  CCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGC  408
            ||||||||||||||||||||||.|||||||||||||||||||||.||||.|||||||..||..|||.||||..|
Sbjct  371  CCAATGTCACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTGCTCCTC  444

Query  409  AGGCTGAGTCAGGCAGGAGCCCGCGTGAAGATCATGGACTATGAAGAATTTGCATACTGCTGGGAAAACTTTGT  482
            ||||||..|.|||||||.|||||.|||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct  445  AGGCTGCATAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGT  518

Query  483  GTACAATGAAGGTCAGCAATTCATGCCTTGGTACAAATTCGATGAAAATTATGCATTCCTGCACCGCACGCTAA  556
            ||.||||||||||||||.|||||||||||||||||||||||||||.||||||||||.|||||||||||||||||
Sbjct  519  GTGCAATGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAA  592

Query  557  AGGAGATTCTC-------------AGGC------------------------------TAAGAATCTTCT----  583
            |||||||||||             ||||                              |||.||.||.||    
Sbjct  593  AGGAGATTCTCAGAAACCCGATGGAGGCAATGTACCCACACATATTCTACTTCCACTTTAAAAACCTACTGAAA  666

Query  584  --CTGTG---------------------GCTT-----------TTA------------CGGCCGCCATGCGG-A  610
              |||||                     ||||           |||            |.||.|.|.|.||| |
Sbjct  667  GCCTGTGGTCGGAACGAAAGCTGGCTGTGCTTCACCATGGAAGTTACAAAGCACCACTCAGCTGTCTTCCGGAA  740

Query  611  GCTGCGCTTCTTGGACC---------TGGTTCCT-----------TCTTTGCAG----------------TTGG  648
            |..|.||.||||   ||         |||.||||           || .|||||                ||||
Sbjct  741  GAGGGGCGTCTT---CCGAAACCAGGTGGATCCTGAGACCCATTGTC-ATGCAGAAAGGTGCTTCCTCTCTTGG  810

Query  649  ACCCG-GCCCAGAT------------------CTACAGGGTCACTTGGTTCATCTCCTGGAGCCCCTGCTTCTC  703
            ..|.| |.|.|.||                  ||||..||||||.||||.||..||.||||||||.|||    |
Sbjct  811  TTCTGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGC----C  880

Query  704  CTGGGGCTGTGCCGGGGAAGTGCGTGCGTTCCT--TCAGGAGAACACA--CACG--------------------  753
            |.|.|  |||||.|||||.|||...|.||||||  .||||    ||||  .|||                    
Sbjct  881  CAGAG--TGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGG----CACAGCAACGTGAATCTCACCATCTTCACC  948

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct  949  GCCCGCCTCTGCTACTTCTGGGATACAGATTACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGT  1022

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1023  GAAGATCATGGGCTACAAAGATTTTGTATCTTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGC  1096

Query  754  --------------------------------------------------------------  753
                                                                          
Sbjct 1097  CTTGGAAGGGACTACAAACCAACTTTCGACTTCTGAAAAGAAGGCTACGGGAGATTCTCCAG  1158

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