Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11394
- Subject:
- XR_001749744.2
- Aligned Length:
- 2725
- Identities:
- 437
- Gaps:
- 2280
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGATCTCGGGTTTGTCGGGCTGAAATGTGGCGGGTCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAACGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTCTTCTTTTTCTTAGCGTGTTGCTTTGTCGCCCACGCTGGTTGCAGTGGTGCGATCTCAGTTCACTGCAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTCGCCTCCCAGGTTCAAGCGATTATCCTGCCTCAGCTTCCCGAGCAGCTAGGACTACAGGTGTGTGCCATCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCTCAGCTAATTTTTTTGGTATTTTTAGTAGAGATGGGGTTTTCCCATGTTGGCCAGGCTGGTCTCGAACTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACCTCAGATGATCTGCCCGCCTCGGCCTCCCAAAGTGGTAGGATTACAGGCGTGAGCCACTGTGCTCGGCAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTTTGGTATGTTTCTTATTTAACTTTCTTTTTAAAAAATACTCTATGTGCTTTTTTTTTTTTACATGTATACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTATATTGTAGAATATTTTTTAAATGTAATTGAGATTCTATTTTGTTCCTTGCCTTTCTTGCTTAATATAATTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCACCATTTAATATAACTGTAGAGCTTTTCACCAGCCCTACTTTCTTGGTCTATTAATACTTGAACTTTTCTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTTAGGATCTCAGCTAAACGGGAAGCATTTTTGAAAAGTGATTGCACAATTGAGAGTGAAAATTACTGAGTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAACAGGCAACTTACATTCTAATACCAGCTCTGTCTCCATCCAGCCGACTGAATAGTCGTGATTAAGTTACTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GACTTCCTTGGATATCTAGATCCTTAAAGTTAAAGAATTATACAAGATAATAATATTTTCTTCAAACTTTAGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATGACTTTATGAACCGCCTTAAGTTTGTATGTTTTCATAGCTTTCAAGAGCTTGTTTACACACTCAATTCTAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTCTAGATACTTTCTAGAAAATAACTGACTTAACTCATTCAATTGATATATTTGTTAGTTGTACTCCTACTCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATGCTTCAGTTAATTATATATGTTGAACAGGTAGGAAGCAGTGCTGTTTTTATTTATTTTAATATGTTATTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TACATTTGAAGAATTATGTTCTTTCTGTAGGCAGCTGAATTTTTTTTTTTTTTGAGACGAAGTCTTGGTATTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCCCTTGCTGGAGTGCAATGGCATGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAGGCAATTCTCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCTCAGACTCCTGAGTAGCTGGGATTACAGGCGCCTGCCACCACGCCCGGATAATTTTTGTATTTTTAGTAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACAGTGTTTCACTATGTTGGCTGGGCTGGTCTCGAACTCCTGCCCTCAGGTGATCCGCCTGCCTCAGCCTCCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAAGTGCTGGGATTACTGGCGTGAGCCACTGCTGCCAGCCGGCAGTTGAATTTTAAGACTGTGGAGCTGGCTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCAGTAGATGAAACAAGATTTCTTGATGTTCCTTCCAGGTTTATTATGCATGTATCTTTAGAGATGATTTTTT 1480
Query 1 ------------------------------------ATGAATCGTCACCTGTGTGTTTGGCTTTTTAGACATCC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTTAAAGACTGTGTTTATTGTATTTCAGATGCTGAGATGAATCGTCACCTGTGTGTTTGGCTTTTTAGACATCC 1554
Query 39 ATCTCTTAATGGTTACCTCCAGTGTCACATCCAGCTCCATTCTCATCAATTTAGACAGATACATCTTGATACAA 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATCTCTTAATGGTTACCTCCAGTGTCACATCCAGCTCCATTCTCATCAATTTAGACAGATACATCTTGATACAA 1628
Query 113 GGCTGCAAGTTTTTAGACAAAACAGGAATTGCATTCTTCATCTGTTAAGTAAGAATTGGTCCAGGAGATATTGC 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGCTGCAAGTTTTTAGACAAAACAGGAATTGCATTCTTCATCTGTTAAGTAAGAATTGGTCCAGGAGATATTGC 1702
Query 187 CATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACAGAAATATATGGAGAACCTGAGTAAGGAGTACCA 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACAGAAATATATGGAGAACCTGAGTAAGGAGTACCA 1776
Query 261 AACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAACCGAAGGTCCTTGAACAGAAGGCATGCTG 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAACCGAAGGTCCTTGAACAGAAGGCATGCTG 1850
Query 335 AGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTGAACAAGCAATTGAAGAATTAGAATCAATG 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTGAACAAGCAATTGAAGAATTAGAATCAATG 1924
Query 409 TGTAAAA--------AGACA----------GAGT--------CTTGCTCTGTGGCCCAGGCTGGAATGCAG--- 453
||||||| |.||| .||| |||||.|| ||..|.||.|||.
Sbjct 1925 TGTAAAAGCCTAAATAAACAAGATGAAAAGCAGTTACAAGAACTTGCACT--------GGAAGAAAGGCAAACC 1990
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1991 ATTGATCAAAAAATCAACATGTTGTACAATGAGCTTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACAAAAA 2064
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2065 TGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATTTACCCGAGAAATAT 2138
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2139 TTGACATGTACCAGAATTATTCGTGCTATAAACACTGGCAATTTGAACTTCTGAATTATACACCAGCAGATTAT 2212
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2213 GGTGGACTACATCATGCAGCCGCCCGAATTTCCGGTGACGGTGTCTATAAGCATTTGAAGTATGAGGGTGGGAT 2286
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2287 TCACCGAGTTCAGCGCATCCCCGAGGTGGGCCTGTCCTCAAGGATGCAGCGCATTCACACAGGAACGATGTCGG 2360
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2361 TTATTGTCCTTCCTCAGCCAGATGAGGTGGATGTGAAATTGGACCCCAAGGATTTGCGAATAGATACATTTCGA 2434
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2435 GCCAAAGGAGCAGGAGGGCAGCATGTTAATAAAACTGATAGTGCCGTCAGACTTGTCCACATCCCCACAGAGAT 2508
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2509 GGGGTTTCACTGTGTTATCCAGTATGGTCGTGATCTCCTGACCTTGTGATCCACCCGCCTTGCCTTCCCAAAAT 2582
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2583 CCTCGGATTACAGGTGTGAGCCACTGCGCCCAGCCATTATAAAGGGCTAGTAGTAGAATGCCAACAAGAAAGAT 2656
Query 454 ------------------------------------------------------------- 453
Sbjct 2657 CACAGATAAAAAATAAAGAAATAGCCTTTCGTGTGTTGAGAGCTAGACTCTACCAGCAGAT 2717
