Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11415
• Subject: NM_008959.3
• Aligned Length: 1419
• Identities: 887
• Gaps: 438

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGTCCTGCGTGGGGAGCAGGACTCTGAGCAAGGATGATGTGAACTACAGGATGCATTTCCGCATGATCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGAGCAGCAAGTGGAGGACATCACCATAGACTTCTTCTACCGGCCGCACACCATCACCCTGCTCAGCTTCACCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCATCAGCCTCATGTACTTCGCCTTCACCAGGGATGACTCTGTTCCGGAAGACAACATCTGGAGAGGCATCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCTGTTATCTTCTTCTTTCTCATCATCAGCGTGTTAGCATTCCCCAATGGTCCATTTACTCGACCTCATCCAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTTATGGCGAATGGTTTTTGGTCTCAGTGTGTTGTATTTCCTCTTCTTGGTATTCCTCCTTTTCCTGAACTTCG  370

Query    1  --------------------------------------------------------------------ATGGAG  6
                                                                                ||||||
Sbjct  371  AGCAGGTTAAATCCCTGATGTATTGGCTGGATCCCAATCTTCGATATGCTACACGAGAAGCGGACATCATGGAG  444

Query    7  TATGCTGTGAACTGCCATGTGATCACCTGGGAGAGGATTATCAGCCACTTTGATATTTTTGCATTTGGACATTT  80
            ||||||||||||||.||||||||.|||||||||||.||..|.||.|||||||||||.|||||||||||.|||||
Sbjct  445  TATGCTGTGAACTGTCATGTGATAACCTGGGAGAGAATCGTTAGTCACTTTGATATATTTGCATTTGGCCATTT  518

Query   81  CTGGGGCTGGGCCATGAAGGCCTTGCTGATCCGTAGTTACGGTCTCTGCTGGACAATCAGTATTACCTGGGAGC  154
            |||||||||||||||||||||||||.|||||||||||||.||.||.|||||||||||||||||.||||||||||
Sbjct  519  CTGGGGCTGGGCCATGAAGGCCTTGTTGATCCGTAGTTATGGGCTTTGCTGGACAATCAGTATCACCTGGGAGC  592

Query  155  TGACTGAGCTCTTCTTCATGCATCTCCTCCCCAATTTTGCCGAGTGCTGGTGGGATCAAGTCATTCTGGACATC  228
            ||||.|||||.|||||||||||||||||.|||||||||||.||||||||||||||.||||||||||||||||||
Sbjct  593  TGACAGAGCTTTTCTTCATGCATCTCCTGCCCAATTTTGCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATC  666

Query  229  CTGTTGTGCAATGGCGGTGGCATTTGGCTGGGCATGGTCGTTTGCCGGTTTTTAGAGATGAGGACTTACCACTG  302
            ||||||||||||||.|||||.||.|||||||||||||||||||||||||||.|.||||||||.|||||||||||
Sbjct  667  CTGTTGTGCAATGGTGGTGGAATCTGGCTGGGCATGGTCGTTTGCCGGTTTCTGGAGATGAGAACTTACCACTG  740

Query  303  GGCAAGCTTCAAGGACATTCATACCACCACCGGGAAGATCAAGAGAGCTGTTCTGCAGTTCACTCCTGCTAGCT  376
            ||||||||||||||||||.||.||||||||.||||||||||||.|||||||.|||||||||||.||||||||||
Sbjct  741  GGCAAGCTTCAAGGACATCCACACCACCACAGGGAAGATCAAGCGAGCTGTGCTGCAGTTCACCCCTGCTAGCT  814

Query  377  GGACCTATGTTCGATGGTTTGACCCCAAATCTTCTTTTCAGAGAGTAGCTGGAGTGTACCTTTTCATGATCATC  450
            ||||.||.||..|.||||||||.|||||.|||||.|||||||||||.|||||..|.|||||.|||||||||||.
Sbjct  815  GGACTTACGTCAGGTGGTTTGATCCCAAGTCTTCCTTTCAGAGAGTGGCTGGTATATACCTCTTCATGATCATA  888

Query  451  TGGCAGCTGACTGAGTTGAATACCTTCTTCTTGAAGCATATCTTTGTGTTCCAAGCCAGTCATCCATTAAGTTG  524
            ||||||.|||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||.|||||.||
Sbjct  889  TGGCAGTTGACTGAGTTGAATACCTTCTTCTTGAAGCACATCTTTGTGTTCCAAGCCAGCCATCCCTTAAGCTG  962

Query  525  GGGTAGAATTCTCTTTATTGGTGGCATCACAGCTCCCACAGTGAGACAGTACTACGCTTACCTCACCGACACAC  598
            |||||||||.|||||.||.||..||||.||.|||||||||||||||||||||||.||.||||||||.|||||||
Sbjct  963  GGGTAGAATCCTCTTCATCGGCTGCATTACGGCTCCCACAGTGAGACAGTACTATGCCTACCTCACGGACACAC  1036

Query  599  AGTGCAAGCGCGTAGGAACACAATGCTGGGTGTTTGGGGTCATTGGTTTCCTGGAGGCCATTGTTTGCATAAAA  672
            ||||||||||.|||||.|||||.||||||||||||||||||||||||||||||||.||.|||||||||||||||
Sbjct 1037  AGTGCAAGCGTGTAGGGACACAGTGCTGGGTGTTTGGGGTCATTGGTTTCCTGGAAGCTATTGTTTGCATAAAA  1110

Query  673  TTTGGACAAGATCTCTTCTCTAAGACCCAAATACTCTATGTTGTGCTTTGGCTTCTTTGCGTGGCTTTCACCAC  746
            |||||||||||||||||.|||||||||||.|||||||||||..||||||||||||||||.|||||.||||||||
Sbjct 1111  TTTGGACAAGATCTCTTTTCTAAGACCCAGATACTCTATGTGATGCTTTGGCTTCTTTGTGTGGCCTTCACCAC  1184

Query  747  TTTCCTCTGTCTGTACGGCATGATTTGGTATGCAGAACACTATGGTCACCGAGAAAAGACCTACTCGGAGTGTG  820
            .|||||.|||||||||||||||.|||||||||||||.||||||||||||||.|||||||||||.||.|||||||
Sbjct 1185  GTTCCTGTGTCTGTACGGCATGGTTTGGTATGCAGAGCACTATGGTCACCGGGAAAAGACCTATTCAGAGTGTG  1258

Query  821  AAGATGGCACCTACAGTCCAGAGATCTCCTGGCATCACAGGAAAGGGACAAAAGGTTCTGAAGACAGCCCACCC  894
            ||||||||||.||||||||||||||||||||||||||..|||||||..|.|||||||||||||||||||||||.
Sbjct 1259  AAGATGGCACTTACAGTCCAGAGATCTCCTGGCATCATGGGAAAGGCTCCAAAGGTTCTGAAGACAGCCCACCG  1332

Query  895  AAGCATGCAGGCAACAACGAAAGCCATTCTTCCAGGAGAAGGAATCGGCATTCCAAGTCAAAAGTCACCAATGG  968
            ||||||.||.|||||.|||||||||||||||||||.||||||||.||||||||.|||||.||||||||.|||||
Sbjct 1333  AAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCTAAGTCCAAAGTCACTAATGG  1406

Query  969  CGTTGGAAAGAAA  981
            .||||||||||||
Sbjct 1407  AGTTGGAAAGAAA  1419