Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11429
- Subject:
- XM_011534296.2
- Aligned Length:
- 3260
- Identities:
- 989
- Gaps:
- 2260
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGCAAAGAGATCCGCACGCAGCTGGTGGAGCAGTTCAAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGCTTCAAGACCTCCAGGAGTTTTTCCGCCGGAAAGCTGAGATTGAGCTCGAGTACTCCCGCAGCCTGGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCTGGCTGAGCGCTTCTCCTCCAAAATCCGCAGCTCCCGGGAGCACCAGTTCAAGAAGGACCAGTACCTCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCGCCTGTGAACTGTTGGTATCTGGTTCTGCATCAGACCCGGCGGGAGAGCCGAGACCATGCCACCCTCAATGA 296
Query 1 -------ATGAACAATGTCATCGTCCGCCTCTCCCAGATCAGTGAGGATGTCATCAGACTCTTCAAAAAGAGCA 67
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CATCTTCATGAACAATGTCATCGTCCGCCTCTCCCAGATCAGTGAGGATGTCATCAGACTCTTCAAAAAGAGCA 370
Query 68 AGGAGATTGGCCTGCAGATGCACGAGGAGCTCCTGAAGGTGACCAATGAGCTCTACACAGTCATGAAAACCTAC 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGAGATTGGCCTGCAGATGCACGAGGAGCTCCTGAAGGTGACCAATGAGCTCTACACAGTCATGAAAACCTAC 444
Query 142 CACATGTACCATGCAGAGAGCATCAGTGCGGAAAGCAAGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTT 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CACATGTACCATGCAGAGAGCATCAGTGCGGAAAGCAAGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTT 518
Query 216 CAATAAGTCAGGAGACCTCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGA 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAATAAGTCAGGAGACCTCAGCATGAACCTGCTCCGGCACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGA 592
Query 290 AGATTGAGAAGATGAAGGAGAAGAGGCAGGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAAT 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGATTGAGAAGATGAAGGAGAAGAGGCAGGCCAAGTACTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAAT 666
Query 364 GACTACTTGCTCAATCTGGCAGCCACCAACGCAGCTATAAGCAAATACTACATCCATGATGTCTCTGATCTGAT 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GACTACTTGCTCAATCTGGCAGCCACCAACGCAGCTATAAGCAAATACTACATCCATGATGTCTCTGATCTGAT 740
Query 438 CGATTGCTGTGATTTGGGCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACC 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CGATTGCTGTGATTTGGGCTTCCATGCCAGCCTGGCCCGCACCTTCCGGACCTATCTCTCAGCTGAATACAACC 814
Query 512 TGGAGACCTCTCGCCACGAAGGGCTGGATGTCATTGAGAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAG 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGAGACCTCTCGCCACGAAGGGCTGGATGTCATTGAGAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAG 888
Query 586 CACACAGTCATGGACATGTGCAATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CACACAGTCATGGACATGTGCAATCAAGTCTTCTGCCCTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGA 962
Query 660 TGAGGTCTGCCAGGTCAGCGCTCAGCAGCCCGTCCAGACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCA 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGAGGTCTGCCAGGTCAGCGCTCAGCAGCCCGTCCAGACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCA 1036
Query 734 GACTGGCCACCCTCAAGATAGAGAATGAGGAGGTTAGGAAAACCCTGGATGCCACCATGCAGACATTACAGGAC 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GACTGGCCACCCTCAAGATAGAGAATGAGGAGGTTAGGAAAACCCTGGATGCCACCATGCAGACATTACAGGAC 1110
Query 808 ATGCTGACTGTGGAGGACTTTGATGTCTCCGATGCCTTCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGC 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATGCTGACTGTGGAGGACTTTGATGTCTCCGATGCCTTCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGC 1184
Query 882 TGCCTCTGAGGCCTACATGAGCAAGATCAACATTGCCAAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTT 955
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGCCTCTGAGACCTACATGAGCAAGATCAACATTGCCAAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTT 1258
Query 956 ATTTTACAAACGGGCCT-----GATGATGT---------TTTCCCCAT-------TTGCCATCCAAG------- 1001
|||||||||| .| ||..|||| |..||.||| .|||...|||||
Sbjct 1259 ATTTTACAAA-----ATTTAAAGAGTATGTGAATGGCAGTAACCTCATCACCAAGCTGCAGGCCAAGCACGATT 1327
Query 1002 -ACTC--------------------------------------------------------------------- 1005
||||
Sbjct 1328 TACTCAAGCAGACCCTGGGCGAAGGGGAAAGAGCAGAATGCGGCACCACCAGCAGAAGAGATGGAAGGCTTAGG 1401
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1402 CTGCCCCACTTTCCTTGGCCGAGCTGCCCCCCTGCTCCCCACTTTGTGCCCCACCCAGCACTTCAAGGAAGAAG 1475
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1476 AAATGCTCGAACCAGGAACCAGGATTCAGGACAAGCTATACCGCTTGTAGTCGAGAGCTGCATCCGTTACATCA 1549
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1550 ATTTATATGGACTCCAGCAGCAGGGGATCTTCAGAGTGCCAGGATCTCAGGTGGAAGTCAATGACATCAAAAAT 1623
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1624 TCCTTTGAGAGAGGTGAAGACCCCCTTGTGGACGATCAAAATGAACGAGATATCAATTCAGTCGCTGGTGTTTT 1697
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1698 AAAACTGTATTTCCGAGGACTGGAAAACCCACTCTTTCCTAAGGAAAGGTTTCAAGATTTGATATCTACTATTA 1771
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1772 AACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTCACCCTTCCCCGCGTGGTCATTGTG 1845
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1846 GTCATGAGATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGTATAGCGACGAGAACATGATGGATCCCTACAA 1919
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1920 CCTGGCCATCTGCTTCGGGCCTACCCTCATGCACATCCCTGATGGGCAGGACCCTGTGTCCTGCCAGGCACACA 1993
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1994 TCAATGAAGTCATCAAAACCATCATCATCCATCATGAAGCCATCTTCCCCAGCCCCCGGGAGCTAGAGGGACCT 2067
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2068 GTGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACACAGCGAGCCAGGGGCCATCGATGA 2141
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2142 AGTTGACCATGACAATGGCACTGAGCCTCATACCAGCGATGAAGAAGTGGAGCAGATCGAGGCTATTGCCAAGT 2215
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2216 TTGACTACATGGGGCGGTCCCCGCGTGAGCTATCCTTCAAGAAGGGGGCCTCGCTGCTCCTGTACCACCGCGCC 2289
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2290 TCGGAGGACTGGTGGGAGGGCCGGCACAACGGCGTGGATGGACTCATCCCCCATCAGTACATAGTTGTACAGGA 2363
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2364 CATGGATGATGCCTTCTCCGACAGCCTGAGCCAGAAGGCTGACAGCGAGGCCAGCAGTGGGCCATTGCTGGATG 2437
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2438 ACAAGGCCTCTTCCAAAAACGACCTCCAGTCCCCCACGGAGCACATCTCGGATTACGGCTTTGGGGGGGTGATG 2511
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2512 GGCCGAGTGCGGTTACGATCTGATGGAGCAGCCATCCCCAGACGCCGAAGCGGGGGCGACACACACAGCCCGCC 2585
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2586 CCGGGGCCTGGGCCCCAGCATAGACACACCACCCCGGGCTGCTGCCTGCCCCAGCAGCCCCCACAAAATCCCCC 2659
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2660 TCACCCGGGGGAGGATCGAGAGCCCTGAGAAGCGGAGGATGGCGACGTTCGGGAGCGCTGGCAGCATCAACTAC 2733
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2734 CCTGACAAGAAGGCGCTCTCCGAAGGGCACTCGATGAGGTCGACCTGCGGTTCCACCAGGCACAGCAGCCTAGG 2807
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2808 GGACCACAAGTCCCTGGAGGCCGAGGCCCTGGCAGAAGACATCGAGAAGACCATGAGCACGGCTCTGCACGAGT 2881
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2882 TGCGGGAACTCGAGAGGCAGAACACGGTCAAGCAGGCGCCAGATGTGGTGCTGGACACCCTGGAGCCCCTGAAG 2955
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2956 AACCCGCCAGGCCCCGTCAGCTCGGAGCCCGCCAGTCCCCTTCACACCATCGTCATCCGCGACCCCGATGCCGC 3029
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3030 CATGCGCCGCAGCAGCAGCTCCTCCACCGAGATGATGACCACCTTCAAGCCAGCCCTGTCCGCCCGCCTGGCTG 3103
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3104 GCGCCCAGCTCCGCCCGCCCCCCATGCGGCCCGTGCGGCCGGTGGTCCAGCACCGGTCCAGCAGCAGCAGCAGC 3177
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3178 TCGGGCGTGGGCAGCCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAACAGCTCAGCGGACAAGTCGGGCAC 3251
Query 1006 ---- 1005
Sbjct 3252 CATG 3255
