Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11429
- Subject:
- XM_017007575.1
- Aligned Length:
- 3284
- Identities:
- 989
- Gaps:
- 2284
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGAGGAGAGACTCGCTGGCATTTGCAGGAGGTGCTGGCGGGTGCCTCCTGATGCCATGTTCAACTCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTACAGTGGGAACTGGGATCTGCTCTCGGGGCTGCATTCAGACAGGAGATCCGCACGCAGCTGGTGGAGCAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAAATGTCTGGAGCAGCAATCAGAGTCGCGACTGCAGCTGCTTCAAGACCTCCAGGAGTTTTTCCGCCGGAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGAGATTGAGCTCGAGTACTCCCGCAGCCTGGAGAAGCTGGCTGAGCGCTTCTCCTCCAAAATCCGCAGCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGGAGCACCAGTTCAAGAAGGACCAGTACCTCCTCTCGCCTGTGAACTGTTGGTATCTGGTTCTGCATCAGA 370
Query 1 --------------------------------------------ATGAACAATGTCATCGTCCGCCTCTCCCAG 30
||||||||||||||||||||||||||||||
Sbjct 371 CCCGGCGGGAGAGCCGAGACCATGCCACCCTCAATGACATCTTCATGAACAATGTCATCGTCCGCCTCTCCCAG 444
Query 31 ATCAGTGAGGATGTCATCAGACTCTTCAAAAAGAGCAAGGAGATTGGCCTGCAGATGCACGAGGAGCTCCTGAA 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATCAGTGAGGATGTCATCAGACTCTTCAAAAAGAGCAAGGAGATTGGCCTGCAGATGCACGAGGAGCTCCTGAA 518
Query 105 GGTGACCAATGAGCTCTACACAGTCATGAAAACCTACCACATGTACCATGCAGAGAGCATCAGTGCGGAAAGCA 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGTGACCAATGAGCTCTACACAGTCATGAAAACCTACCACATGTACCATGCAGAGAGCATCAGTGCGGAAAGCA 592
Query 179 AGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACCTCAGCATGAACCTGCTCCGG 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGCTGAAGGAGGCTGAGAAGCAGGAGGAGAAGCAGTTCAATAAGTCAGGAGACCTCAGCATGAACCTGCTCCGG 666
Query 253 CACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGATTGAGAAGATGAAGGAGAAGAGGCAGGCCAAGTA 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACGAGGACCGGCCCCAGCGCCGCAGCTCTGTGAAGAAGATTGAGAAGATGAAGGAGAAGAGGCAGGCCAAGTA 740
Query 327 CTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATGACTACTTGCTCAATCTGGCAGCCACCAACGCAGCTA 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTCTGAGAACAAGCTGAAATGCACAAAGGCCCGGAATGACTACTTGCTCAATCTGGCAGCCACCAACGCAGCTA 814
Query 401 TAAGCAAATACTACATCCATGATGTCTCTGATCTGATCGATTGCTGTGATTTGGGCTTCCATGCCAGCCTGGCC 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAAGCAAATACTACATCCATGATGTCTCTGATCTGATCGATTGCTGTGATTTGGGCTTCCATGCCAGCCTGGCC 888
Query 475 CGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGACCTCTCGCCACGAAGGGCTGGATGTCATTGA 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGCACCTTCCGGACCTATCTCTCAGCTGAATACAACCTGGAGACCTCTCGCCACGAAGGGCTGGATGTCATTGA 962
Query 549 GAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAGCACACAGTCATGGACATGTGCAATCAAGTCTTCTGCC 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAATGCAGTGGACAACCTGGATTCCCGAAGTGACAAGCACACAGTCATGGACATGTGCAATCAAGTCTTCTGCC 1036
Query 623 CTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGATGAGGTCTGCCAGGTCAGCGCTCAGCAGCCCGTCCAG 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTCCACTCAAGTTCGAGTTCCAGCCCCACATGGGGGATGAGGTCTGCCAGGTCAGCGCTCAGCAGCCCGTCCAG 1110
Query 697 ACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCAGACTGGCCACCCTCAAGATAGAGAATGAGGAGGTTAG 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACAGAACTGCTCATGCGTTATCACCAGCTGCAGTCCAGACTGGCCACCCTCAAGATAGAGAATGAGGAGGTTAG 1184
Query 771 GAAAACCCTGGATGCCACCATGCAGACATTACAGGACATGCTGACTGTGGAGGACTTTGATGTCTCCGATGCCT 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAAAACCCTGGATGCCACCATGCAGACATTACAGGACATGCTGACTGTGGAGGACTTTGATGTCTCCGATGCCT 1258
Query 845 TCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTGAGGCCTACATGAGCAAGATCAACATTGCC 918
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1259 TCCAACACAGTCGATCGACAGAGTCCGTCAAGTCGGCTGCCTCTGAGACCTACATGAGCAAGATCAACATTGCC 1332
Query 919 AAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTTATTTTACAAACGGGCCT-----GATGATGT------- 980
||||||||||||||||||||||||||||||||||||||||||||||| .| ||..||||
Sbjct 1333 AAGAGGAGAGCCAACCAGCAGGAAACAGAAATGTTTTATTTTACAAA-----ATTTAAAGAGTATGTGAATGGC 1401
Query 981 --TTTCCCCAT-------TTGCCATCCAAG--------ACTC-------------------------------- 1005
|..||.||| .|||...||||| ||||
Sbjct 1402 AGTAACCTCATCACCAAGCTGCAGGCCAAGCACGATTTACTCAAGCAGACCCTGGGCGAAGGGGAAAGAGCAGA 1475
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1476 ATGCGGCACCACCAGAGGAAGAAGAAATGCTCGAACCAGGAACCAGGATTCAGGACAAGCTATACCGCTTGTAG 1549
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1550 TCGAGAGCTGCATCCGTTACATCAATTTATATGGACTCCAGCAGCAGGGGATCTTCAGAGTGCCAGGATCTCAG 1623
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1624 GTGGAAGTCAATGACATCAAAAATTCCTTTGAGAGAGGTGAAGACCCCCTTGTGGACGATCAAAATGAACGAGA 1697
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1698 TATCAATTCAGTCGCTGGTGTTTTAAAACTGTATTTCCGAGGACTGGAAAACCCACTCTTTCCTAAGGAAAGGT 1771
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1772 TTCAAGATTTGATATCTACTATTAAACTGGAGAACCCAGCCGAGAGGGTGCACCAGATCCAACAAATCCTCGTC 1845
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1846 ACCCTTCCCCGCGTGGTCATTGTGGTCATGAGATACCTCTTCGCTTTCCTCAACCACCTCTCCCAGTATAGCGA 1919
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1920 CGAGAACATGATGGATCCCTACAACCTGGCCATCTGCTTCGGGCCTACCCTCATGCACATCCCTGATGGGCAGG 1993
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1994 ACCCTGTGTCCTGCCAGGCACACATCAATGAAGTCATCAAAACCATCATCATCCATCATGAAGCCATCTTCCCC 2067
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2068 AGCCCCCGGGAGCTAGAGGGACCTGTGTATGAAAAATGCATGGCTGGAGGGGAAGAATATTGTGACAGCCCACA 2141
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2142 CAGCGAGCCAGGGGCCATCGATGAAGTTGACCATGACAATGGCACTGAGCCTCATACCAGCGATGAAGAAGTGG 2215
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2216 AGCAGATCGAGGCTATTGCCAAGTTTGACTACATGGGGCGGTCCCCGCGTGAGCTATCCTTCAAGAAGGGGGCC 2289
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2290 TCGCTGCTCCTGTACCACCGCGCCTCGGAGGACTGGTGGGAGGGCCGGCACAACGGCGTGGATGGACTCATCCC 2363
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2364 CCATCAGTACATAGTTGTACAGGACATGGATGATGCCTTCTCCGACAGCCTGAGCCAGAAGGCTGACAGCGAGG 2437
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2438 CCAGCAGTGGGCCATTGCTGGATGACAAGGCCTCTTCCAAAAACGACCTCCAGTCCCCCACGGAGCACATCTCG 2511
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2512 GATTACGGCTTTGGGGGGGTGATGGGCCGAGTGCGGTTACGATCTGATGGAGCAGCCATCCCCAGACGCCGAAG 2585
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2586 CGGGGGCGACACACACAGCCCGCCCCGGGGCCTGGGCCCCAGCATAGACACACCACCCCGGGCTGCTGCCTGCC 2659
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2660 CCAGCAGCCCCCACAAAATCCCCCTCACCCGGGGGAGGATCGAGAGCCCTGAGAAGCGGAGGATGGCGACGTTC 2733
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2734 GGGAGCGCTGGCAGCATCAACTACCCTGACAAGAAGGCGCTCTCCGAAGGGCACTCGATGAGGTCGACCTGCGG 2807
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2808 TTCCACCAGGCACAGCAGCCTAGGGGACCACAAGTCCCTGGAGGCCGAGGCCCTGGCAGAAGACATCGAGAAGA 2881
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2882 CCATGAGCACGGCTCTGCACGAGTTGCGGGAACTCGAGAGGCAGAACACGGTCAAGCAGGCGCCAGATGTGGTG 2955
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2956 CTGGACACCCTGGAGCCCCTGAAGAACCCGCCAGGCCCCGTCAGCTCGGAGCCCGCCAGTCCCCTTCACACCAT 3029
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3030 CGTCATCCGCGACCCCGATGCCGCCATGCGCCGCAGCAGCAGCTCCTCCACCGAGATGATGACCACCTTCAAGC 3103
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3104 CAGCCCTGTCCGCCCGCCTGGCTGGCGCCCAGCTCCGCCCGCCCCCCATGCGGCCCGTGCGGCCGGTGGTCCAG 3177
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3178 CACCGGTCCAGCAGCAGCAGCAGCTCGGGCGTGGGCAGCCCGGCCGTGACGCCCACCGAGAAGATGTTCCCCAA 3251
Query 1006 ---------------------------- 1005
Sbjct 3252 CAGCTCAGCGGACAAGTCGGGCACCATG 3279
