Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11435
Subject:
NR_153325.1
Aligned Length:
3116
Identities:
684
Gaps:
2432

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCTTGGCGGGCGGTGAGGCGTGGGGTGACGGGGGGATGGCGGGGGCCGGCATGCGCGCGCATGCGCCGTGGTA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTTTTCTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGGAGTCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGGATCTGCAGAAAAGGCTGTCTTGGAACAATTTGGATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCTTTAACTGGAACAGAGGTAGATTCTTCAAGTTTACACTCCTAGCATCATTGTTTCTTCTCTCTCTCAACCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCACCTATGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCTGATCCCAATATCCCTCCAACCTTCAGTGCC  444

Query    1  ------------------------------------------ATGGCTCCAGCAGGAAATAACAAATTTTCAAG  32
                                                      ||||||||||||||||||||||||||||||||
Sbjct  445  TTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACATGGCTCCAGCAGGAAATAACAAATTTTCAAG  518

Query   33  TAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAATTCTGGATATTGGA  106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTCAGGATTTTGATAATAATTCTGGATATTGGA  592

Query  107  ACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTATCTGGGCCTTTGACC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAAGATGTTTGGGTGGTATCTGGGCCTTTGACC  666

Query  181  TTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGACAACGTGGCAGTCCC  254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCAGGTGATTGGCGAGGACAACGTGGCAGTCCC  740

Query  255  CTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTG  328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTCACACCTTTATAAGGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTG  814

Query  329  TGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAG  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGGTACCCAATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAG  888

Query  403  TTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTG  476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTGTCAGGACTGGTGTTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTG  962

Query  477  TAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCA  550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TAAGCTCCTGGATTTCCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCA  1036

Query  551  GACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAG  624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GACTGGAAAAGATCATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAG  1110

Query  625  AAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCC--------------  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct 1111  AAGAAGCTAGAAGAACTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCCTAGTTTTTATCTCA  1184

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1185  AGATGTGTCATACCGTCTGTAATGAAGCAGGCATGCCCTCTTTAGGCTAACATATTTTAGTGGCTTTGCTTTTT  1258

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1259  GCTTTTTAAAAAGTTTTTCTCTTTAAGAGATGTGGTCTCGCCGTGTCATCCAGGCTGGAGTGCAGTGGTGGAAT  1332

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1333  CATAGCTCACTATAGCCTCAAACTTCTGGGCTTAAGCAATCCTCCTGCCTCTGCCCCCTGAGCAGCTGGGACTA  1406

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1407  CAGGCACACACCATCACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATCCTAAATTTATGACTA  1480

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1481  AAAATTCCCCCAAAAGATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCAGGAACTAATTATTAA  1554

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1555  GGGAGCTTTGACACCTGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTGCCCACAGATGACACT  1628

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1629  GCATTTGTATCCCTGTGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTCCAAACCATGCATTGT  1702

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1703  CTGTGATGTATCTGCCCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGACCTGAATTGGTCTTG  1776

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1777  GAGGCAGCTTTTAGAAATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTTCTTTTTTCTCCTCTC  1850

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1851  ATGAATCTGCTCGTTTCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTGCTCATTAAATGTGTT  1924

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1925  CTATATACTAGGCTCAGTGCTTTACATGTGTTGTCTCACAATGACTCTCTGAGGTAAATACACTATCCCCATTT  1998

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 1999  TACCTGTGAGAAAATTGAGGCTTAGAGAGCTTAGTGTCTTACCTGAGTTTCACTTTTCCAAAGTAGTCATCCAC  2072

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2073  AAAGTATGAGGCAGACAGATCTAAGAGAAGAAAGACAGCTGAGGTAGATTCAAATCTTTTCTGACATGGATGGT  2146

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2147  GGCTTTTTACTCAGAAATATATACCTATTTCCATGGGTATTTGTGGGCCTGAGGCATGCTTGGCAAGAAGAGTC  2220

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2221  TGGTTTCTCGTCTGCTATGCAAGCCAAAGGGACTTTAATGTTCTTTGAATTGAACCCTCCTTAGCTCTGTGGAA  2294

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2295  AGAGACAGTCAGGAATATTTGGGAATTAGACGGCAATACTTTGTGGGGTTTATTAGAGCCCATGCTTGCCTCCA  2368

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2369  GAGATACAGTTCTTTTAGTGACCAGATACTGCCAAATTGATGTGTTCTTGCTTTCCAGGTGAGCTTTTTGTTCT  2442

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2443  TAAGATTAAGAAACCTATGAAGGATCTGCAGCCAGGCATGGTGGCTCAGGCCTATAATCTCAGCACTTTGGGAA  2516

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2517  ATCGAGGTGGGTGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAATGAAACCCTATCTTTAC  2590

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2591  AAAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAAATGGGA  2664

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2665  GGATTGCTTGAGCCTGGCAGGTCAAGGCTGCGATGGGACATGGTCATGCCACTGGACGCCAGCCTGGGCCACAG  2738

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2739  AGGGAGACCCTGTCTCAAAAAAAGAAAAGAAAAAAGAAAAAGGTCTGCCCACAAAATCACTAGCTTATTATTTG  2812

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2813  CTTCCTGTGTGCCTGCTTGTCTACCTAGCATAGTAGGCCAAAGGTCCAAAGGCATTTAGCATTCCTAGGGGAAA  2886

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2887  TTGTGGCTGTTTTTCTGAGCCAGATCTCTTGATTTGGGTTTACACGGAGTCCTTTCATGGACTATCCTGAGTAT  2960

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 2961  TGTCAGTAAAACGTCTTGGGGCATAAGAACTTGTCTGAATCTGTCATACATACCACTGCTGTCTTTTCCGAGTG  3034

Query  685  --------------------------------------------------------------------------  684
                                                                                      
Sbjct 3035  GTATTACAAGAAAGATTTTTGTGGTGTGTTTGTTCTAAGAGAAATGCCAAGGCTTTCAGATAAAGATAAGATGA  3108

Query  685  --------  684
                    
Sbjct 3109  TAATGATT  3116

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