Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11444
- Subject:
- NM_028279.3
- Aligned Length:
- 2236
- Identities:
- 814
- Gaps:
- 1301
Alignment
Query 1 ATGGC--------GGAATCCAGGGGCCGTCTGTACCTTTGG-ATGTGCTTGGCTGCTGCGCTGGCATCTTTC-- 63
||||| ||.||| ||.||..|||.|| ||||||.|..|.||.|.||||||.||.|||
Sbjct 1 ATGGCAAGGCCTAGGCATC---------TCCGTGGCTTGGGAATGTGCATTACCGCGGTGCTGGCCTCCTTCAT 65
Query 64 --CTGATGGGATTTATGGTGGGCTGGTTTATTAAGCCTCTCAAAGAAACAACCACTTCTG-TGCGCTATCATCA 134
|| ||.||||..|||||||||||||||||||||||||||||||||||.||||||| || |.||||||||
Sbjct 66 CGCT----GGCTTTACTGTGGGCTGGTTTATTAAGCCTCTCAAAGAAACAACTACTTCTGCTG-GTTATCATCA 134
Query 135 AAGTATACGGTGGAAACTGGTATCCGAAATGAAAGCTGAAAACATCAAATCATTTCTTCGTTCTTTTACAAAGC 208
||||||||....||||||..||||.||||||||||||||||||||.|.|||||||||||||||.||||||||.|
Sbjct 135 AAGTATACAACAGAAACTCCTATCTGAAATGAAAGCTGAAAACATTAGATCATTTCTTCGTTCCTTTACAAAAC 208
Query 209 TTCCTCATCTGGCAGGAACAGAACAAAATTT-CTTGCTTGCCAAGAAAATCCAAACCCAGTGGAAGAAATTTGG 281
||||.||||||||||||||.||||||||||| ||| ||||||||||||||||||||.|||||||||||||||||
Sbjct 209 TTCCCCATCTGGCAGGAACGGAACAAAATTTACTT-CTTGCCAAGAAAATCCAAACACAGTGGAAGAAATTTGG 281
Query 282 ACTAGATTCAGCCAAGTTGGTTCATTATGATGTCCTCTTATCTTACCCCAATGAGACAAATGCCAACTATATAT 355
|.||||||||||.||..||||||||||.|||||.|||||.|||||.||.||||||||.|||||.||||||.|||
Sbjct 282 ATTAGATTCAGCTAACCTGGTTCATTACGATGTTCTCTTGTCTTATCCAAATGAGACCAATGCAAACTATGTAT 355
Query 356 CGATTGTGGATGAACATGAAACTGAGATTTTCAAAACATCATACCTTGAACCACCACCAGATGGCTATGAGAAT 429
|.|||||||||||.||||.|..|||||||||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct 356 CCATTGTGGATGAGCATGGAGTTGAGATTTTTAAAACATCATACCTTGAACCACCACCAGATGGATATGAGAAT 429
Query 430 GTTACAAATATTGTGCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGGAGATCTTGTATATGTGAA 503
||||||||.||..|.||||||||.|||||.||.||||||...||||||||.||||||||.|||||.|||||.||
Sbjct 430 GTTACAAACATCATACCACCATACAATGCGTTTTCAGCCAGCGGCATGCCGGAGGGAGAGCTTGTGTATGTCAA 503
Query 504 CTATGCTCGCACTGAAGACTTTTTCAAACTAGAAAGAGAGATGGGCATCAACTGTACTGGGAAGATTGTTATTG 577
|||.|||||.|||||.|||||.|||||||||||||||||.|||..|||||||||.|||||.|||||||||||.|
Sbjct 504 CTACGCTCGTACTGAGGACTTCTTCAAACTAGAAAGAGAAATGAACATCAACTGCACTGGCAAGATTGTTATCG 577
Query 578 CAAGATATGGAAAAATCTTCAGAGGAAATAAAGTTAAAAATGCCATGTTAGCAGGAGCCATAGGAATCATCTTG 651
||||||||||.||.|||||.||||||||.|||||.||||||||||||.||||.||.|||||.||||||||..||
Sbjct 578 CAAGATATGGGAAGATCTTTAGAGGAAACAAAGTCAAAAATGCCATGCTAGCTGGGGCCATGGGAATCATTCTG 651
Query 652 TACTCAGATCCAGCTGACTACTTTGCTCCTGAGGTACAGCCATATCCCAAAGGATGGAATCTTCCTGGAACTGC 725
|||||.||||||||||||||||||||.|||||.||.|||||||||||||||||||||||.|||||||||.||||
Sbjct 652 TACTCTGATCCAGCTGACTACTTTGCCCCTGATGTGCAGCCATATCCCAAAGGATGGAACCTTCCTGGAGCTGC 725
Query 726 AGCCCAGAGAGGAAATGTGTTAAATTTGAATGGTGCTGGTGACCCACTCACTCCAGGCTATCCAGCAAAAGAAT 799
|||.||||||||||||||.||||||.|||||||.||.|||||||||||||||||||||||||||||.|||||||
Sbjct 726 AGCTCAGAGAGGAAATGTCTTAAATCTGAATGGGGCAGGTGACCCACTCACTCCAGGCTATCCAGCTAAAGAAT 799
Query 800 ACACTTTCAGACTTGATGTTGAAGAAGGAGTGGGAATCCCCCGAATACCTGTACATCCCATTGGATATAATGAT 873
||||.|||||||||..|||||||||||.||||||.||.||....||||||||||||||.|||||||||||||||
Sbjct 800 ACACCTTCAGACTTCCTGTTGAAGAAGCAGTGGGGATTCCAAACATACCTGTACATCCTATTGGATATAATGAT 873
Query 874 GCAGAAATATTATTACG--------------------------------------------GTAT-------AG 896
|||||.|.|.||||||| ||.| ||
Sbjct 874 GCAGAGAGACTATTACGCAACTTGGGAGGAGCTGCTCCACCAGACAAAAGCTGGAAGGGAAGTCTAAATGTCAG 947
Query 897 TT------TT--------CTT--------GT----------------------TGGAT----ATGAGATTAAGA 922
|| || ||| || ||.|| ||.|.|||||.|
Sbjct 948 TTACAATATTGGGCCTGGCTTTACAGGAAGTGAATATTCCAGGAACATTAGAATGCATGTTAATAACATTAACA 1021
Query 923 ---------------------TATTTTGCACTA-------GT-------------------TGTCTATTTTC-- 947
||.||.|.|||| || |||| |||.||
Sbjct 1022 AAATCACAAGAATTTACAATGTAATTGGAACTATCAGAGGGTCTACAGAACCTGACAGGTATGTC-ATTCTCGG 1094
Query 948 ---TCAT------------------------------------------------------------------- 951
||||
Sbjct 1095 AGGTCATCGTGACTCCTGGGTGTTTGGAGGGATTGACCCTACCACTGGGACAGCAGTTTTGCAAGAGATTGCGC 1168
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1169 GAAGTTTTGGGAAACTTGTGAATGGAGGTTGGAGACCTAGGAGAACTATCATTTTTGCCAGCTGGGATGCAGAG 1242
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1243 GAGTTTGGGCTGCTGGGGTCAACTGAATGGGCTGAAGAGAATGCAAAGCTCCTACAGGAGAGAAGCATTGCTTA 1316
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1317 CATCAACTCAGATTCTGCTATAGAAGGTAATTACACTCTTCGAGTTGATTGTACTCCTCTTCTAAACCAGCTGG 1390
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1391 TTTACAAAGTGGCAAGAGAGATCTCCAGTCCTGATGATGGTTTTGAAAGTAAATCACTTTATGAAAGCTGGCTG 1464
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1465 GAAAAAGACCCTTCACCTGAAAATAAAGAGTGTCCTAGAATCAATAAGCTTGGATCTGGGAGTGATTTTGAGGC 1538
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1539 TTACTTCCAAAGACTTGGAATTGCTTCAGGCAGAGCTCGCTACACTAAGAACAAGAAAACAGATAAATACAGTA 1612
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1613 GCTATCCTGTATATCATACCATCTATGAGACGTTTGAATTAGTACAGAACTTTTATGACCCCACATTTAAAAAG 1686
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1687 CAACTGTCTGTGGCTCAGTTACGAGGAGCATTGGTATATGAGCTTGCAGACTCTGTGGTCATTCCTTTCAACAT 1760
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1761 TCAAGACTATGCAAAAGCCTTGAAAAACTATGCAGCAAGTATTTTCAACATATCCAAGAAACACGACCAGCAAT 1834
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1835 TGAGAAACCATGCAGTGTCATTTGATCCCTTATTTTCTGCTGTGAAAAACTTTTCGGAGGCTGCTTCAGATTTT 1908
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1909 CACAGAAGACTTACACAAGTTGATCTTAATAATCCTATTGCAGTGAGAATTATGAATGACCAGCAGATGCTTCT 1982
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1983 TGAAAGAGCATTCATAGATCCTCTTGGTTTACCTGGGAGGAAGTTCTACAGGCACATCATCTTTGCTCCAAGCA 2056
Query 952 -------------------------------------------------------------------------- 951
Sbjct 2057 GCCACAACAAATATGCCGGAGAATCATTCCCTGGGATTTATGATGCCATGTTTGATATTGAAAATAAGGCAGAC 2130
Query 952 -------------------------------------------------------------------------- 951
Sbjct 2131 CCTTCCTTGGCCTGGGCAGAAGTGAAGAAACATATTTCTATTGCAGCTTTTACAATTCAGGCAGCAGCGGGGAC 2204
Query 952 ---------------- 951
Sbjct 2205 ACTGACCAATGTGTTA 2220
