Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11447
- Subject:
- NR_033374.1
- Aligned Length:
- 3848
- Identities:
- 132
- Gaps:
- 3701
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCTCCATCCCTGCATTCCTCCATCGCAGCATCCCTGCATGCCTCCGTTCTCTGCATCCCTCCACCCCAGTAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTGCACCTCTTCATCCCTCCATTCCTGCATCCCTCTATTTTTCCATCCCTCCATTCCTGTATCCCTGTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCATCCTCCATCCCAGCATCCCTCCATCCCTGCTCCCCACTCTCACTTCCCTTCCCTTCACAGACAGGCTTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGCCATCCTCAGACCCCACCCAGGGTTACCTGATGCCTTTCCAGCTGCACACGGGGACTGACTCACCTCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTCTCAGTCCCAAAGTCCCGAAAGAGAGCATCTGATGTGGTCAGCTTGTGACAAGGCGTCCACCTTCTGTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGACATGGAGGCCAGGGGAAGGTCTCACTGCCCAGCACCCCACCCTGTGCTCCCAGGCCTTTTGAATGTTCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTGCTCAGCCCAGTGACTGCGGGCTGTGGCTCCTCCTCCAGCCTCCCCTCGAGGTCCTGGTCTTACTTAGGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCCCGGGTGTAGATGCCTTCCCACCCACCAGGCATTGCCCCTTTTCCTGGCTTCACAGACTCGGGAATAAAGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCCTTCTGTTTCCCCTCTTGCAGAAGGAGATCCGGTTGGCAGCTAAACCGCGCTGGGAACAGGGGCCTGAGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGACTAGGGCTCTTTCCCCGGGGCTGCTGCAGATGGGGAGGAGCCTACACCCGCCTCCCGAGTGCTAATCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGACAGGCTGGAGAATGGCCAGTCAGCCTGAGGCCACCGCGGGACACCACCTAGGCCCAGCTTCTCCCCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCAGAGGGCGCCAGAGCCCGCCAAGCCTCGTAGGAGATGGCAACAGGGCCTGCTGCTGCCACCTAGCGGCCAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCCGGGAATGAATCTCGGCACGCTCATTACCCAGCGACTCTGCCCATCTTGACCCTTTATGTGAAGCAGAACA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCGCTTCCGCAGTGAGCTGTCAGAAGGCGTCGTGCCTGTCTTGCTAGTGGGGAAACTGAGGCTCAGAGAGGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAAGACTTGCCCAAGATCACACCACCGGGACCCAGGATTCAAGCGCAGGCCTGCCCAGGCTCTCTGTGGCCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGCTGCGAGGAGGCAGCCAGGGACCAGGTGCCACCCTTCTGAGACACCTGAGATCCCAGGCCCGAGAGGATGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGCGGGATTACCTGGAGCGTGTCTGAATGCTGGAGGAAGAAGGGCAGCTGGGAGATGAAGCTGTCAGGATGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCGCATCCCATTTCCTGCCTCGTTTCAGTTCAACTTTCCAACAGACCTCCCTGGCTCGTCTTGCTCTTCTCTAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGACAAACAAACAGGCTCAGAGAGGTGGTGTGACTTGCCCAAGGTCACTCAGCTTGGATGCTATGGAACAGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGTCCACTGTCCCAGTCTGTTTATGGGAAGCCGCTCTGCAACTGTCCTGACCCACCACATGCCCCACCGCTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCTCTTGCCCTGACCCCTTGTTCCCTGGACCAGGGTGGCACAGCTCCAGGCTCTTGGGCCCTTCCCGAGGGCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCACCTGTGACTGTGTCCCCAAAGACCTGAGTGGCTGAGGGGGCCCCACAGAGCTTGGACTTCCTGGAGGACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGGAGGGGTCTGCCAGCCACCCCCACCACGCCCGCCCCAGGGCTCCCCTGGAGCTTCCATGCCAGCCGGACTCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGTGGGTCTGGAGGAGCACCGTGCCTCCAATCAGACCTTGAGATGTGCCCCCTGCCCCCACTGTGCCCTCCCCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCCCAGGAGTCTGGTTGCAAACCCTGATTAAGGGGATTTTATCTCCACCAGAGGGCCAGTAGGTGGGAAGTAGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTAAACAATGCAGGTTTATAATCTCACAGTTCTGGAGGTCAAGAGTCTGAAATGGGCCTCATGGGGCTAAAACC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAGGTGTCTGCAGGGCTGTGTTCCTTCTGGAGGCTCCAGGGCAGGAAGGGGAGGATCCACTTCTGTGCCTTTCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCTTCTAGAGGCTGCCTGCGTTCCTTGGCTCGTGGCCCCTTCCTCCACCTTCAAGCCAGCAGCGGAGGCCTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTCCTTCTCATGCCATCTCTCTGTTCTCTCTCCTGCCTCCTCCTCCACACTGAAGGACCCCTGTGATCACACTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCCCCCCCACCGGATGACCCAGGATAATCCATCTCCCTGTTTGAAGGTCGGCTGATTAGCAACCTTCATTCCAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTGCCTCCTTCATTCCCCCTGGCCATGTAATGGGATTCACAGCTTCTGGGGATTAGGACATGGACATCTTGTGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGGGGGCATAATTCTGTCGACGACACCAAGAAACACTTGGATGTTAAGGATTCACCGAACACTGTTCAGGCTGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATCATACCATTGCACTCCAGCCTGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCAACAAGAGTGAACCTCCATCACAAAAAACAAACAACAAAAAAAATCAGGTATAATTACATACAGTGAAACAT 2516
Query 1 ------------------------------------------------------ATGGAGTTTCTCT-----TG 15
||||| |||| ||
Sbjct 2517 ATGGTGACTCAAGTACACAGTTCAGTGTTTTTTTTGTTTTTGTTTTTTTTTAAGATGGA----CTCTTGCTCTG 2586
Query 16 TCAACCGGGCTGGAGTGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCACCTTCCTGGTTCAAGCGATTCTGC 89
||..||.|||||||||.||||||.||.|||||||||||||||||||||...|||||.|||||||||.|||||||
Sbjct 2587 TCGCCCAGGCTGGAGTTCAGTGGCGCGATCTTGGCTCACTGCAACCTCTGTCTTCCAGGTTCAAGCAATTCTGC 2660
Query 90 CTCGACCTCTCAAGTAGCTGGGATTACAA--GCACCAGCCACCATGCCTGGCTAA-TTTTGTATTTT------- 153
|||..||||.|||||||||||||.||||| |||| |||||||||||||||||| |||||||||||
Sbjct 2661 CTCAGCCTCCCAAGTAGCTGGGACTACAAGTGCAC--GCCACCATGCCTGGCTAATTTTTGTATTTTTAATAGA 2732
Query 154 -------------------------------------------------------------------------- 153
Sbjct 2733 GATGGGGTTTTTTTTTCTTTCTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGTCACCCAGGCTGGAGTGCA 2806
Query 154 -------------------------------------------------------------------------- 153
Sbjct 2807 GTGTCACAATCTCGGCTCACTGCAACCTCTGCCTCTTGGGTTCAAGCAATTCTTCTGCCTCAGCCTCCTGAGTA 2880
Query 154 -------------------------------------------------------------------------- 153
Sbjct 2881 GCTGGTAGCTGGGACTATAGGCACGTGCCACCACACCCAGTTAATTTTTTGTATTTTTAGTAGAGATGGGGTTT 2954
Query 154 -------------------------------------------------------------------------- 153
Sbjct 2955 CACCGGGTTAGCCAGGATGGTCTCAATCTCTTGACCTCGTGATCTGCCCGTTTTGGTCTCCCAAAGTGATGGGA 3028
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3029 TTACAGGCGTGAGCCACCGCGCCAGGCTGAGATGGGGTTTCACCACGTTGGCCAGGCTGGTCTGGAACTCCTGA 3102
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3103 CCTCAGGTGATCCGCCTGCCTTGGACTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCGTGCCCGGCCAGTT 3176
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3177 CTATGAGTTTTGATGAATGTGTCCTGCTTCTTCCCAGGCTCCACCATCTCTTCCCCTAAAGGCAACCACCATTC 3250
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3251 TGATTTCTCTCACCAAAGACTGGAAAAATATCCCAATACCTGGATGTATGCCTCACGTGTCCCGCTGGCCCCAG 3324
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3325 CACCCAGGTATAGTTAGTTACTGCTGTGCCTGGCTTCACTCTCACTTTTTTTTTTTTTTTCTTTTTTTGAGACA 3398
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3399 TAGTCTCGCTCTGTAGCCCAGGCTGGAGTGCAGTGTGGCACAATCTCAGCTCACTGCAACCTTCACCTCCCAGG 3472
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3473 TTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGCGACTACAGGTGCCCACCACCACACCTGGCTAATTT 3546
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3547 TTGTATTTTTAGTAGAGATGGGGTTTCACCTTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCA 3620
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3621 CCTGCCTCAGCCTCCCAAGGTGCTGGGATTGCAGGCCGGCCTTACCTGGTATGGTTTTTAGGTTCATGTTGATG 3694
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3695 CCTGGAGTTTCAGTAATTCCCTCCCATTCGTTGCTGAGTAGCACTGCAACACATGCAGGCAGCTATTTGGGGAT 3768
Query 154 -------------------------------------------------------------------------- 153
Sbjct 3769 CTTTTCACCTGTTGATGGGTGTCTGGACTGTTTCCAGTTTTTGGCTGTTACAAATGAAGCCTCTGTGAGCCACG 3842
