Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11524
- Subject:
- XM_006526798.3
- Aligned Length:
- 5403
- Identities:
- 1641
- Gaps:
- 3528
Alignment
Query 1 ATGAGTTCTGAATGTGATGGTG---GTTCCAAAGCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGGCAAGA 71
|||||||||||||||||||.|| |.||.|||||||||.||||||||||||||.||||||.|.||||.|.|||
Sbjct 1 ATGAGTTCTGAATGTGATGTTGGAAGCTCTAAAGCTGTGGTGAATGGCTTGGCATCTGGCAACCATGGACCAGA 74
Query 72 CAAAGACATGGATCCTACAAAAATCTGCACTGGGAAGGGAGCGGTGACTCTCCGGGCCTCGTCTTCCTACAGGG 145
||||||||||||.|||||.|||||||||||||||||.|||.|.||||||||.||||||||||||||||||||||
Sbjct 75 CAAAGACATGGACCCTACCAAAATCTGCACTGGGAAAGGAACAGTGACTCTTCGGGCCTCGTCTTCCTACAGGG 148
Query 146 AAACCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCAGATGAGTGGAGGCTT 219
.||||||||||||.|||||||.||||||.||||||.|.|.|.|.||.||||||||..|||||||.||||..|||
Sbjct 149 GAACCCCAAGCAGCAGCCCTGTGAGCCCCCAGGAATCTCCGAAGCATGAAAGCAAGTCAGATGAATGGAAACTT 222
Query 220 TCTTCCAGTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTGTGCATCC 293
|||||||||||.|||.|||||||.||.|||||||||||..||||.||||||||||||||.||||||||||||||
Sbjct 223 TCTTCCAGTGCAGATACCAATGGCAACGCCCAGCCCTCCCCACTTGCTGCCAAGGGCTATAGAAGTGTGCATCC 296
Query 294 CAACCTTCCTTCTGACAAGTCCCAGGATGCCACTTCCTCCAGTGCAGCCCAGCCGGAGGTAATAGTTGTCCCTC 367
||.||||.||.||||||||.||||||.||||||.||||||||..||||||.|.|.||||||||||||||.||||
Sbjct 297 CAGCCTTTCTGCTGACAAGCCCCAGGGTGCCACCTCCTCCAGCTCAGCCCCGTCTGAGGTAATAGTTGTTCCTC 370
Query 368 TCTACCTGGTTAATACTGACAG------AGGGCAAGAAGGCACTGCCAGACCTCCAACACCTCTGGGGCCTCTT 435
|||||||||||||||||||||| ||||||||||||||||||||||.|||||.||.||||||||||.|||
Sbjct 371 TCTACCTGGTTAATACTGACAGAGGGCAAGGGCAAGAAGGCACTGCCAGAACTCCAGCATCTCTGGGGCCACTT 444
Query 436 GGCTGCGTCCCCACAATCCCAGCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCGACTCTAGATGATTTCAT 509
||||||||||.|||..||||.|||||..||.||||.|||||||||||||||||||||||.||.|||||||||||
Sbjct 445 GGCTGCGTCCACACTGTCCCGGCGACCACCCCTGCTGCCTCACCTCTGACCTTCCCGACACTCGATGATTTCAT 518
Query 510 TCCCCCTCATCTGCAGAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTCTGGCTCCTTTGCCCCCATTAGCC 583
|||||||||.|||||||||.|||||||||||||||||||||||.|.||.|.|||||||.|..||||...|||||
Sbjct 519 TCCCCCTCACCTGCAGAGGCGGCCCCACCACAGCCAGCCAGCCAGTGCTTGTGGCTCCCTCTCCCCTGCTAGCC 592
Query 584 AGACGCCACCATCCTTCTCACCACCACCTCCGCTGGTCCCTCCTGCCCCGGAGGACCTCCGCAGAGTCTCGGAG 657
|||||.|||||.| |||||||||||||||||||||||||||.|.||||||||||||||.|||||.|..||||
Sbjct 593 AGACGTCACCACC---CTCACCACCACCTCCGCTGGTCCCTCCCGTCCCGGAGGACCTCCACAGAGGCCTGGAG 663
Query 658 CCTGACCTCACGGGAGCTGTTTCGAGTACCGATTCCAGTCCTCTACTAAATGAAGTTTCTTCTTCCCTTATTGG 731
|||||||||.||||||||||.||.||||||| .|||||||.|||||||.||||||||||||||||..||||.
Sbjct 664 CCTGACCTCCCGGGAGCTGTCTCAAGTACCG---GCAGTCCTTTACTAAACGAAGTTTCTTCTTCCCACATTGA 734
Query 732 AACTGATTCCCAAGCCTT---TCCATCAGTTAGCAAGCCTTCATCCGCCTATCCCTCCACAACGATTGTCAATC 802
|||.||||||||||.||| ||||.|| ||||..|||||.||.|||||.||||||||.||.||.|||||.|
Sbjct 735 AACCGATTCCCAAGACTTCCCTCCAACA---AGCAGACCTTCGTCTGCCTACCCCTCCACCACCATCGTCAACC 805
Query 803 CTACTATTGTGCTCTTGCAACACAATCGAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATCCTGTCTCAGAA 876
||||.|||||||||.||||.|||||||||||.||||||||.|||||||||||.|||||||||||||.||||||.
Sbjct 806 CTACCATTGTGCTCCTGCAGCACAATCGAGAGCAGCAAAAGCGACTCAGTAGTCTTTCAGATCCTGCCTCAGAG 879
Query 877 AGAAGAGTGGGAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATTGAAAAAAG 950
|||||||.|||.|||||||||.|||.||||||||..|.|.|||.|||.||.||.||||.||||..|||.|.|||
Sbjct 880 AGAAGAGCGGGTGAGCAGGACCCAGTACCAACCCCAGCAGAACTCACTTCGCCCGGCAGGGCTTCTGAGAGAAG 953
Query 951 AGCAAAGGATGACAGTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCA 1024
.||||||||||..||.||.||||||||||.||||||.||||||.|.||||||||.||.|..|||||||||||||
Sbjct 954 GGCAAAGGATGCTAGCAGACGGGTGGTGAGGAGCACACAGGACCTGAGCGATGTGTCTACAGATGAAGTGGGCA 1027
Query 1025 TCCCACTCCGGAACACTGAGAGATCAAAAGACTGGTACAAGACTATGTTTAAACAGATCCACAAACTGAACAG- 1097
|||||||||||||.||.|||.||||.||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1028 TCCCACTCCGGAATACCGAGCGATCGAAAGACTGGTACAAAACTATGTTTAAACAGATCCACAAACTGAACAGA 1101
Query 1098 -------------------------------------------------------------------------- 1097
Sbjct 1102 GACACTCCTGAGGAAAACCCTTATTTCCCTACGTACAAATTCCCCGAGCTTCCAGAAATCCTGCAGAATTCTGA 1175
Query 1098 ---------------------------------------------------------------AGATGATGATT 1108
|||||||||||
Sbjct 1176 AGAGGACAGCTCTTACACTCCTACCTACCAGTTTCCTGCATCTACGCCTAGTCCTAAGTCAGAAGATGATGATT 1249
Query 1109 CAGATCTGTACTCTCCCAGATACTCATTTTCTGAAGACACAAAATCTCCCCTTTCTGTGCCTCGCTCAAAAAGT 1182
|.|||.|..|.||.||..||||.||.||.|||||.||||||||.||||||||||||||||||||||||||||||
Sbjct 1250 CTGATGTCCATTCCCCTCGATATTCCTTCTCTGACGACACAAAGTCTCCCCTTTCTGTGCCTCGCTCAAAAAGT 1323
Query 1183 GAGATGAGCTACATTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACTACCCCTCCCAGCCCGCTCTTCCTC 1256
|||||||.||||||.||.||.|||||.||.||.||||||||.||||||||.||.||||||||||||||.|||||
Sbjct 1324 GAGATGAACTACATCGAAGGGGAGAAAGTGGTTAAGAGGTCCGCCACACTCCCGCTCCCAGCCCGCTCCTCCTC 1397
Query 1257 ACTGAAGTCAAGCTCAGAAAGAAATGACTGGGAACCCCCAGATAAGAAAGTAGACACAAGAAAATATCGTGCAG 1330
|||.|||||.|||.|.||||||||.||||||||.|||||||||||||||||.||.||.||||||||.||.||||
Sbjct 1398 ACTCAAGTCCAGCCCGGAAAGAAACGACTGGGAGCCCCCAGATAAGAAAGTGGATACGAGAAAATACCGAGCAG 1471
Query 1331 AGCCCAAGAGCATTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGACCAACGAAAAGAT------------- 1391
|||||||.||||||||||||||||||||.|||||||||||.||.||||||||.||.|||||
Sbjct 1472 AGCCCAAAAGCATTTACGAATATCAGCCGGGCAAGTCTTCGGTCCTGACCAATGAGAAGATGAGTCGGGATATA 1545
Query 1392 -------------------------------------------------------------------------- 1391
Sbjct 1546 AGCCCAGAAGAGATAGATTTAAAGAATGAACCTTGGTATAAATTCTTTTCGGAATTGGAGTTTGGGAGACCGCC 1619
Query 1392 -------------------------------------------------------------------------- 1391
Sbjct 1620 TCCCAAAAAGATATGGGACTATACTCCTGGAGACTGCTCTATCCTTCCTAGAGAGGATAGAAAGACTAATCTAG 1693
Query 1392 -------------------------------------------------------------------------- 1391
Sbjct 1694 AGAAAGATCTCAGCTTCTGCCAAGCAGAGTTAGAGGCAGATTTAGAGAAAGTGGAGACCGTTAATAAATCACCC 1767
Query 1392 -----------------GAGCTCAGCCATCAGCCCTACTCCGGAAATTTCTTCAGAGACTCCTGGATATATATA 1448
|||||||||..|||||||.|||||.||.|||.|.||||||.|||||||||||||.||
Sbjct 1768 AGTGCAAACTCGCCACAGAGCTCAGCAGTCAGCCCGACTCCAGACATTACGTCAGAGCCTCCTGGATATATCTA 1841
Query 1449 TTCTTCCAACTTCCATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGGGATCTCACTAGCTTGGAGAATGAGA 1522
|||||||||||||||||||||||||||.|||||.||||||.|.||.||||.||||.||||||||||||||||||
Sbjct 1842 TTCTTCCAACTTCCATGCAGTGAAGAGAGAATCGGACGGGACCCCCGGGGGTCTCGCTAGCTTGGAGAATGAGA 1915
Query 1523 GACAAATTTATAAAAGTGTCTTGGAAGGTGGTGACATCCCTCTTCAGGGCCTGAGTGGGCTCAAGCGACCATCC 1596
|.||.||.|||||.|||||||||||||||||.||||||||||||||||||||.|||||||||||||||||.|||
Sbjct 1916 GGCAGATCTATAAGAGTGTCTTGGAAGGTGGCGACATCCCTCTTCAGGGCCTCAGTGGGCTCAAGCGACCTTCC 1989
Query 1597 AGCTCTGCTTCCACTAA--------------------------------------------------------- 1613
|||||.|||||||||||
Sbjct 1990 AGCTCAGCTTCCACTAAAGTGGATCGTAAAGGCGGGAATGCTCACATGATTTCTTCATCATCAGTTCATAGCCG 2063
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2064 AACGTTTCACACTAGCAATGCTTTAGGCCCTGGGTGTAAGCACAAGAAACCCCTGTCGGCTGCGAAAGCCTGCA 2137
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2138 TTTCGGAGATCCTTCCTTCTAAATTCAAACCCAGGCTCTCTGCTCCCAGCGCTCTTTTGCAGGAACAGAAGAGT 2211
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2212 GTCCTGTTACCCTCAGAGAAGGCTCAGAGCTGTGAGAACCTCTGTGTGTCTTTGAATGATTCCAAAAGAGGCCT 2285
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2286 CCCACTCCGGGTTGGGGGGAGCATCGAGAACCTGCTCATGCGCTCCCGGCGGGATTACGATAGCAAGTCCAGTA 2359
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2360 GTACCATGAGCCTGCAGGAGTACGGCACCAGCTCCAGGAGGCCCTGCCCTCTCTCCAGAAAGGCTGGACTGCAC 2433
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2434 TTCTCCATGTTCTACCGGGACATGCACCAGATCAACCGAGCTGGCCTCTCCCTGGGCTCCATCTCCTCCTCAAG 2507
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2508 TGTGCGAGATCTTGCCTCCCACTTTGAAAGGAGCAGACTGACGTTAGCCAGGGGTGAGCTGGGCGCTAGCCAAG 2581
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2582 AGGGCTCAGAGCATATCCCCAAGCACACCGTGTCCTCCCGCATCACGGCCTTTGAGCAGCTCATTCAGCGGTCC 2655
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2656 CGGTCCATGCCGTCCCTGGACTTCTCTGGCCGGCTGAGCAAGTCCCCGACCCCTGTGCTCTCTAGAAGCGGCCT 2729
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2730 GACCTCAGCTCGTTCAGCGGAATCCCTCCTCGAGTCTACCAAGCTCCGTCCCAGAGAGATGGACGGGATGGACT 2803
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2804 CCGGAGGGGTCTATGCGTCGCCCACGTGTAGCAATATGGCGGACCACGCCTTGAGCTTCCGGAGCCTTGTGCCC 2877
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2878 TCTGAGCCTCTTTCCATCTGCTCAGATGAGCTAGACCACTGCTCAAATGTTTCTAACGACAGCAGGGAGGGCAG 2951
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2952 CGGGGGCAGTGTTCATGGAGACTTCCCCAAACATCGCCTCAACAAGTGCAAGGGCACCTGCCCGGCTTCATACA 3025
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 3026 CCCGGTTCACCACTATCCGCAAGCATGAGCAGCAGTCGTCCAGGCAGTCAGACTGGCGCTCGGATTCCAGGGGG 3099
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 3100 GACAAGAACAGTCTCCTCAGAAACATCCACCTGATGAGTCCCCTCCCTTTTCGATTGAAAAAGCCCCTCCAACA 3173
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 3174 GCACCCCAGACAGCCTCCCCCCAGTGACTCCTCAGAGTCCCCTGCTGGCCAGAAAGCAGACCTTCCCTGCCACG 3247
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 3248 ACCCTCAGGACCAGCCCCACTCTGCGGGGAAACCCCTGGTCCCTGCTCGCCTGTCTTCCCGACATACCATGGCA 3321
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 3322 AGGCTTAGCCACAACCTAGAACCCCCTCTGGACAGACCCGCAGGCCTGGAGGACTGCACAAGGGCCATTAATAA 3395
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 3396 CGGGAACCCTGTGCCCTACTCAGACCATGGCTTGGACAGGAACAACAACCCACAAAGTGAACTGGCAGCGGCCC 3469
Query 1614 ----AGATTCAGAATCGCCAAGACATTTTATACCAGCTGATTACTTGGAATCCACGGAAGAATTTATTCGAAGA 1683
|||||||||.||.||||||||||||||||||||||||||||||||.|||||.||||||||||||||.|||
Sbjct 3470 ATGGAGATTCAGAGTCACCAAGACATTTTATACCAGCTGATTACTTGGAGTCCACAGAAGAATTTATTCGGAGA 3543
Query 1684 CGTCATGATGATAAAGAGAAACTTTTAGCGGACCAGAGACGACTTAAACGCGAGCAAGAAGAGGCTGATATTGC 1757
||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||
Sbjct 3544 CGGCACGATGATAAAGAGAAACTTTTAGCGGACCAGAGACGACTTAAGCGCGAGCAAGAAGAGGCCGATATTGC 3617
Query 1758 AGCTCGACGCCACACAGGCGTCATTCCGACGCACCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCA 1831
||||||.|||||||||||.|||||.|||||.||.||||||||||||||||||||||||||||||||||||||||
Sbjct 3618 AGCTCGCCGCCACACAGGTGTCATCCCGACTCATCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCA 3691
Query 1832 ATATAGACGATACTGCAAAAAGGAAATCTGGGTCAGAG------------------AAATATGACT-----GGG 1882
|||||||.|||||.||.||||||||||||||||.|||| ||||.||||| |..
Sbjct 3692 ATATAGATGATACGGCCAAAAGGAAATCTGGGTTAGAGATGAGACCTGCTCGAGCCAAATTTGACTTTAAAGCC 3765
Query 1883 CA------------------------------------------------------------------------ 1884
||
Sbjct 3766 CAGACCCTGAAGGAGCTGCCTCTGCAGAAGGGAGACGTTGTTTACATCTACAGACAGATTGACCAGAACTGGTA 3839
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3840 TGAAGGTGAACACCATGGCCGGGTGGGAATCTTCCCACGCACCTATATCGAGCTTCTTCCTCCAGCTGAGAAGG 3913
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3914 CTCAGCCCAGAAAGTTGGCACCCGTACAAGTTTTGGAATATGGAGAAGCCATTGCGAAGTTTAACTTTAATGGA 3987
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3988 GATACACAAGTAGAAATGTCTTTCCGAAAGGGGGAGAGGATCACGCTGCTCCGACAGGTGGATGAGAACTGGTA 4061
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4062 CGAAGGGAGGATTCCTGGGACATCTCGCCAAGGCATTTTCCCTATCACCTATGTAGATGTGCTTAAGAGGCCAT 4135
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4136 TGGTGAAAACCCCTGTGGATTACATCGACCTGCCTTATTCTTCTTCCCCAAGTCGCAGTGCCACTGTGAGCCCA 4209
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4210 CAGTATACTAGTCACAGCAAGCTCATCATGCCAGCCCCTTCATCTCTACCCCACCCCCGCCGAGCCCTGTCCCC 4283
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4284 TGAGATGCACGCCATCACCTCCGAGTGGATCTCTCTGACTGTCGGGGTCCCAGGCAGGCGTTCTCTGGCCATGA 4357
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4358 CACCACCCTTGCCTCCTCTGCCTGAGGCTTCTGTCTATGACATGGACCGCCTGGCCTTGTCAGCAAGGGCCCGT 4431
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4432 CCCTCCTTGCCTCTCAGCCTCCCCTATTCAAGTTGGTCAGATCACTCCACCCTGCGCCCAGTGGTCTCCCCGAT 4505
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4506 GGCCCTGCCTCCACCCCACAAAGCCTACTCACTGGCACCCAGTGTCCAGGCTCCTCTTCACGTCAATGGAGATG 4579
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4580 GTGGTATTCACATTCGCCAAGATGGCTTCTCCCAGCCACCACCTGGGAACTCTGATAGGGTCATCTCAGAGCTT 4653
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4654 AGTGACGCCTTTAGCAGCCAGAGCAAGAGACAGCCCTGGCGAGAAGATGGACCATATGACAGGAAAGCAGAGAG 4727
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4728 CGAGGCAGGTGAGAGATACCCTGGTGGACCCAAGATCTCTAAGAAGAGCTGCTTGAAACCTTCAGACGTGGTCA 4801
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4802 GGTGCCTGAGTTCTGAGCAGAGACTCTCAGAGTTCCACACTCCTGAGGACAGTCAGTCCTGCAAGCCCCTGGGT 4875
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4876 GGCCCTTTCCCAGCCTGGGAGACTGGGCCACCAGAGCTGCACAGAGCTGTCGAGGCTGACAGGAAGGCTGCTCA 4949
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4950 GAGTGGTGTGAGCCAGCCTTCTCATCATTCATTGAGCGCAGGACCTGATCTCACAGAATCTGAAAAGAACTATG 5023
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 5024 TGGAAGCGGTTTGCAATGAGATCATAAACATTGCGGAGAAATCTGTTCATTACTGCAGCACTGTCTCTCATCCC 5097
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 5098 CTTGACTTCCATCACAAGGTACCCCCTTCTGACAATAAATCATCTTTAATCATTTCTCAGCAACCTCAAGCCCA 5171
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 5172 GCAGCGAAGAGTCACCCCAGACAGGAGTCAGCCCTCACTGGATTTGTGTAGCTACCAAGCGTTATATAGTTATG 5245
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 5246 TGCCACAGAACGATGATGAGTTGGAACTCCGAGATGGAGATATTGTTGATGTCATGGAAAAATGTGACGATGGA 5319
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 5320 TGGTTTGTTGGCACTTCGAGAAGGACGAGGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAACCTTTATATCT 5393
Query 1885 - 1884
Sbjct 5394 A 5394
