Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11524
- Subject:
- XM_006526806.3
- Aligned Length:
- 3546
- Identities:
- 1641
- Gaps:
- 1671
Alignment
Query 1 ATGAGTTCTGAATGTGATGGTG---GTTCCAAAGCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGGCAAGA 71
|||||||||||||||||||.|| |.||.|||||||||.||||||||||||||.||||||.|.||||.|.|||
Sbjct 1 ATGAGTTCTGAATGTGATGTTGGAAGCTCTAAAGCTGTGGTGAATGGCTTGGCATCTGGCAACCATGGACCAGA 74
Query 72 CAAAGACATGGATCCTACAAAAATCTGCACTGGGAAGGGAGCGGTGACTCTCCGGGCCTCGTCTTCCTACAGGG 145
||||||||||||.|||||.|||||||||||||||||.|||.|.||||||||.||||||||||||||||||||||
Sbjct 75 CAAAGACATGGACCCTACCAAAATCTGCACTGGGAAAGGAACAGTGACTCTTCGGGCCTCGTCTTCCTACAGGG 148
Query 146 AAACCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCAGATGAGTGGAGGCTT 219
.||||||||||||.|||||||.||||||.||||||.|.|.|.|.||.||||||||..|||||||.||||..|||
Sbjct 149 GAACCCCAAGCAGCAGCCCTGTGAGCCCCCAGGAATCTCCGAAGCATGAAAGCAAGTCAGATGAATGGAAACTT 222
Query 220 TCTTCCAGTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTGTGCATCC 293
|||||||||||.|||.|||||||.||.|||||||||||..||||.||||||||||||||.||||||||||||||
Sbjct 223 TCTTCCAGTGCAGATACCAATGGCAACGCCCAGCCCTCCCCACTTGCTGCCAAGGGCTATAGAAGTGTGCATCC 296
Query 294 CAACCTTCCTTCTGACAAGTCCCAGGATGCCACTTCCTCCAGTGCAGCCCAGCCGGAGGTAATAGTTGTCCCTC 367
||.||||.||.||||||||.||||||.||||||.||||||||..||||||.|.|.||||||||||||||.||||
Sbjct 297 CAGCCTTTCTGCTGACAAGCCCCAGGGTGCCACCTCCTCCAGCTCAGCCCCGTCTGAGGTAATAGTTGTTCCTC 370
Query 368 TCTACCTGGTTAATACTGACAG------AGGGCAAGAAGGCACTGCCAGACCTCCAACACCTCTGGGGCCTCTT 435
|||||||||||||||||||||| ||||||||||||||||||||||.|||||.||.||||||||||.|||
Sbjct 371 TCTACCTGGTTAATACTGACAGAGGGCAAGGGCAAGAAGGCACTGCCAGAACTCCAGCATCTCTGGGGCCACTT 444
Query 436 GGCTGCGTCCCCACAATCCCAGCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCGACTCTAGATGATTTCAT 509
||||||||||.|||..||||.|||||..||.||||.|||||||||||||||||||||||.||.|||||||||||
Sbjct 445 GGCTGCGTCCACACTGTCCCGGCGACCACCCCTGCTGCCTCACCTCTGACCTTCCCGACACTCGATGATTTCAT 518
Query 510 TCCCCCTCATCTGCAGAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTCTGGCTCCTTTGCCCCCATTAGCC 583
|||||||||.|||||||||.|||||||||||||||||||||||.|.||.|.|||||||.|..||||...|||||
Sbjct 519 TCCCCCTCACCTGCAGAGGCGGCCCCACCACAGCCAGCCAGCCAGTGCTTGTGGCTCCCTCTCCCCTGCTAGCC 592
Query 584 AGACGCCACCATCCTTCTCACCACCACCTCCGCTGGTCCCTCCTGCCCCGGAGGACCTCCGCAGAGTCTCGGAG 657
|||||.|||||.| |||||||||||||||||||||||||||.|.||||||||||||||.|||||.|..||||
Sbjct 593 AGACGTCACCACC---CTCACCACCACCTCCGCTGGTCCCTCCCGTCCCGGAGGACCTCCACAGAGGCCTGGAG 663
Query 658 CCTGACCTCACGGGAGCTGTTTCGAGTACCGATTCCAGTCCTCTACTAAATGAAGTTTCTTCTTCCCTTATTGG 731
|||||||||.||||||||||.||.||||||| .|||||||.|||||||.||||||||||||||||..||||.
Sbjct 664 CCTGACCTCCCGGGAGCTGTCTCAAGTACCG---GCAGTCCTTTACTAAACGAAGTTTCTTCTTCCCACATTGA 734
Query 732 AACTGATTCCCAAGCCTT---TCCATCAGTTAGCAAGCCTTCATCCGCCTATCCCTCCACAACGATTGTCAATC 802
|||.||||||||||.||| ||||.|| ||||..|||||.||.|||||.||||||||.||.||.|||||.|
Sbjct 735 AACCGATTCCCAAGACTTCCCTCCAACA---AGCAGACCTTCGTCTGCCTACCCCTCCACCACCATCGTCAACC 805
Query 803 CTACTATTGTGCTCTTGCAACACAATCGAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATCCTGTCTCAGAA 876
||||.|||||||||.||||.|||||||||||.||||||||.|||||||||||.|||||||||||||.||||||.
Sbjct 806 CTACCATTGTGCTCCTGCAGCACAATCGAGAGCAGCAAAAGCGACTCAGTAGTCTTTCAGATCCTGCCTCAGAG 879
Query 877 AGAAGAGTGGGAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATTGAAAAAAG 950
|||||||.|||.|||||||||.|||.||||||||..|.|.|||.|||.||.||.||||.||||..|||.|.|||
Sbjct 880 AGAAGAGCGGGTGAGCAGGACCCAGTACCAACCCCAGCAGAACTCACTTCGCCCGGCAGGGCTTCTGAGAGAAG 953
Query 951 AGCAAAGGATGACAGTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCA 1024
.||||||||||..||.||.||||||||||.||||||.||||||.|.||||||||.||.|..|||||||||||||
Sbjct 954 GGCAAAGGATGCTAGCAGACGGGTGGTGAGGAGCACACAGGACCTGAGCGATGTGTCTACAGATGAAGTGGGCA 1027
Query 1025 TCCCACTCCGGAACACTGAGAGATCAAAAGACTGGTACAAGACTATGTTTAAACAGATCCACAAACTGAACAGA 1098
|||||||||||||.||.|||.||||.||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1028 TCCCACTCCGGAATACCGAGCGATCGAAAGACTGGTACAAAACTATGTTTAAACAGATCCACAAACTGAACAGA 1101
Query 1099 GATGATGATTCAGATCTGTACTCTCCCAGATACTCATTTTCTGAAGACACAAAATCTCCCCTTTCTGTGCCTCG 1172
|||||||||||.|||.|..|.||.||..||||.||.||.|||||.||||||||.||||||||||||||||||||
Sbjct 1102 GATGATGATTCTGATGTCCATTCCCCTCGATATTCCTTCTCTGACGACACAAAGTCTCCCCTTTCTGTGCCTCG 1175
Query 1173 CTCAAAAAGTGAGATGAGCTACATTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACTACCCCTCCCAGCCC 1246
|||||||||||||||||.||||||.||.||.|||||.||.||.||||||||.||||||||.||.||||||||||
Sbjct 1176 CTCAAAAAGTGAGATGAACTACATCGAAGGGGAGAAAGTGGTTAAGAGGTCCGCCACACTCCCGCTCCCAGCCC 1249
Query 1247 GCTCTTCCTCACTGAAGTCAAGCTCAGAAAGAAATGACTGGGAACCCCCAGATAAGAAAGTAGACACAAGAAAA 1320
||||.||||||||.|||||.|||.|.||||||||.||||||||.|||||||||||||||||.||.||.||||||
Sbjct 1250 GCTCCTCCTCACTCAAGTCCAGCCCGGAAAGAAACGACTGGGAGCCCCCAGATAAGAAAGTGGATACGAGAAAA 1323
Query 1321 TATCGTGCAGAGCCCAAGAGCATTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGACCAACGAAAAGATGAG 1394
||.||.|||||||||||.||||||||||||||||||||.|||||||||||.||.||||||||.||.||||||||
Sbjct 1324 TACCGAGCAGAGCCCAAAAGCATTTACGAATATCAGCCGGGCAAGTCTTCGGTCCTGACCAATGAGAAGATGAG 1397
Query 1395 CTCAGCCATCAGCCCTACTCCGGAAATTTCTTCAGAGACTCCTGGATATATATATTCTTCCAACTTCCATGCAG 1468
||||||..|||||||.|||||.||.|||.|.||||||.|||||||||||||.||||||||||||||||||||||
Sbjct 1398 CTCAGCAGTCAGCCCGACTCCAGACATTACGTCAGAGCCTCCTGGATATATCTATTCTTCCAACTTCCATGCAG 1471
Query 1469 TGAAGAGGGAATCAGACGGGGCTCCTGGGGATCTCACTAGCTTGGAGAATGAGAGACAAATTTATAAAAGTGTC 1542
|||||||.|||||.||||||.|.||.||||.||||.|||||||||||||||||||.||.||.|||||.||||||
Sbjct 1472 TGAAGAGAGAATCGGACGGGACCCCCGGGGGTCTCGCTAGCTTGGAGAATGAGAGGCAGATCTATAAGAGTGTC 1545
Query 1543 TTGGAAGGTGGTGACATCCCTCTTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCTCTGCTTCCACTAAAGA 1616
|||||||||||.||||||||||||||||||||.|||||||||||||||||.||||||||.||||||||||||||
Sbjct 1546 TTGGAAGGTGGCGACATCCCTCTTCAGGGCCTCAGTGGGCTCAAGCGACCTTCCAGCTCAGCTTCCACTAAAGA 1619
Query 1617 TTCAGAATCGCCAAGACATTTTATACCAGCTGATTACTTGGAATCCACGGAAGAATTTATTCGAAGACGTCATG 1690
||||||.||.||||||||||||||||||||||||||||||||.|||||.||||||||||||||.|||||.||.|
Sbjct 1620 TTCAGAGTCACCAAGACATTTTATACCAGCTGATTACTTGGAGTCCACAGAAGAATTTATTCGGAGACGGCACG 1693
Query 1691 ATGATAAAGAGAAACTTTTAGCGGACCAGAGACGACTTAAACGCGAGCAAGAAGAGGCTGATATTGCAGCTCGA 1764
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.
Sbjct 1694 ATGATAAAGAGAAACTTTTAGCGGACCAGAGACGACTTAAGCGCGAGCAAGAAGAGGCCGATATTGCAGCTCGC 1767
Query 1765 CGCCACACAGGCGTCATTCCGACGCACCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCAATATAGA 1838
|||||||||||.|||||.|||||.||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1768 CGCCACACAGGTGTCATCCCGACTCATCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCAATATAGA 1841
Query 1839 CGATACTGCAAAAAGGAAATCTGGGTCAGAG------------------AAATATGACT-----GGGCA----- 1884
.|||||.||.||||||||||||||||.|||| ||||.||||| |..||
Sbjct 1842 TGATACGGCCAAAAGGAAATCTGGGTTAGAGATGAGACCTGCTCGAGCCAAATTTGACTTTAAAGCCCAGACCC 1915
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1916 TGAAGGAGCTGCCTCTGCAGAAGGGAGACGTTGTTTACATCTACAGACAGATTGACCAGAACTGGTATGAAGGT 1989
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 1990 GAACACCATGGCCGGGTGGGAATCTTCCCACGCACCTATATCGAGCTTCTTCCTCCAGCTGAGAAGGCTCAGCC 2063
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2064 CAGAAAGTTGGCACCCGTACAAGTTTTGGAATATGGAGAAGCCATTGCGAAGTTTAACTTTAATGGAGATACAC 2137
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2138 AAGTAGAAATGTCTTTCCGAAAGGGGGAGAGGATCACGCTGCTCCGACAGGTGGATGAGAACTGGTACGAAGGG 2211
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2212 AGGATTCCTGGGACATCTCGCCAAGGCATTTTCCCTATCACCTATGTAGATGTGCTTAAGAGGCCATTGGTGAA 2285
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2286 AACCCCTGTGGATTACATCGACCTGCCTTATTCTTCTTCCCCAAGTCGCAGTGCCACTGTGAGCCCACAGTATA 2359
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2360 CTAGTCACAGCAAGCTCATCATGCCAGCCCCTTCATCTCTACCCCACCCCCGCCGAGCCCTGTCCCCTGAGATG 2433
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2434 CACGCCATCACCTCCGAGTGGATCTCTCTGACTGTCGGGGTCCCAGGCAGGCGTTCTCTGGCCATGACACCACC 2507
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2508 CTTGCCTCCTCTGCCTGAGGCTTCTGTCTATGACATGGACCGCCTGGCCTTGTCAGCAAGGGCCCGTCCCTCCT 2581
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2582 TGCCTCTCAGCCTCCCCTATTCAAGTTGGTCAGATCACTCCACCCTGCGCCCAGTGGTCTCCCCGATGGCCCTG 2655
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2656 CCTCCACCCCACAAAGCCTACTCACTGGCACCCAGTGTCCAGGCTCCTCTTCACGTCAATGGAGATGGTGGTAT 2729
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2730 TCACATTCGCCAAGATGGCTTCTCCCAGCCACCACCTGGGAACTCTGATAGGGTCATCTCAGAGCTTAGTGACG 2803
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2804 CCTTTAGCAGCCAGAGCAAGAGACAGCCCTGGCGAGAAGATGGACCATATGACAGGAAAGCAGAGAGCGAGGCA 2877
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2878 GGTGAGAGATACCCTGGTGGACCCAAGATCTCTAAGAAGAGCTGCTTGAAACCTTCAGACGTGGTCAGGTGCCT 2951
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 2952 GAGTTCTGAGCAGAGACTCTCAGAGTTCCACACTCCTGAGGACAGTCAGTCCTGCAAGCCCCTGGGTGGCCCTT 3025
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3026 TCCCAGCCTGGGAGACTGGGCCACCAGAGCTGCACAGAGCTGTCGAGGCTGACAGGAAGGCTGCTCAGAGTGGT 3099
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3100 GTGAGCCAGCCTTCTCATCATTCATTGAGCGCAGGACCTGATCTCACAGAATCTGAAAAGAACTATGTGGAAGC 3173
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3174 GGTTTGCAATGAGATCATAAACATTGCGGAGAAATCTGTTCATTACTGCAGCACTGTCTCTCATCCCCTTGACT 3247
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3248 TCCATCACAAGGTACCCCCTTCTGACAATAAATCATCTTTAATCATTTCTCAGCAACCTCAAGCCCAGCAGCGA 3321
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3322 AGAGTCACCCCAGACAGGAGTCAGCCCTCACTGGATTTGTGTAGCTACCAAGCGTTATATAGTTATGTGCCACA 3395
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3396 GAACGATGATGAGTTGGAACTCCGAGATGGAGATATTGTTGATGTCATGGAAAAATGTGACGATGGATGGTTTG 3469
Query 1885 -------------------------------------------------------------------- 1884
Sbjct 3470 TTGGCACTTCGAGAAGGACGAGGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAACCTTTATATCTA 3537
