Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11562
- Subject:
- XR_001736937.1
- Aligned Length:
- 2199
- Identities:
- 581
- Gaps:
- 1615
Alignment
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 1 AATGAAAGATTTCAAACCCCAAACAGTGCAACTGAAACTTTTGTATTAGCATACTACTGAGAATATCTAACATG 74
Query 4 TTGTTACTAATCAATGTCGTTCTGACCTTGTGGGTTTCCTGTGCTAATGGACAAGTGAAACCTTGTGATTTTCC 77
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTGTTACTAATCAATGTCATTCTGACCTTGTGGGTTTCCTGTGCTAATGGACAAGTGAAACCTTGTGATTTTCC 148
Query 78 AGACATTAAACATGGAGGTCTATTTCATGAGAATATGCGTAGACCATACTTTCCAGTAGCTGTAGGAAAATATT 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGACATTAAACATGGAGGTCTATTTCATGAGAATATGCGTAGACCATACTTTCCAGTAGCTGTAGGAAAATATT 222
Query 152 ACTCCTATTACTGTGATGAACATTTTGAGACTCCTTCAGGAAGTTACTGGGATTACATTCATTGCACACAAAAT 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTCCTATTACTGTGATGAACATTTTGAGACTCCTTCAGGAAGTTACTGGGATTACATTCATTGCACACAAAAT 296
Query 226 GGGTGGTCACCAGCAGTACCATGTCTCAGAAAATGTTATTTTCCTTATTTGGAAAATGGATATAATCAAAATTA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGTGGTCACCAGCAGTACCATGTCTCAGAAAATGTTATTTTCCTTATTTGGAAAATGGATATAATCAAAATTA 370
Query 300 TGGAAGAAAGTTTGTACAGGGTAACTCTACAGAAGTTGCCTGCCATCCTGGCTACGGTCTTCCAAAAGCGCAGA 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGGAAGAAAGTTTGTACAGGGTAACTCTACAGAAGTTGCCTGCCATCCTGGCTACGGTCTTCCAAAAGCGCAGA 444
Query 374 CCACAGTTACATGTACGGAGAAAGGCTGGTCTCCTACTCCCAGATGCATCCGTGTCAGAACATGCTCAAAATCA 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCACAGTTACATGTACGGAGAAAGGCTGGTCTCCTACTCCCAGATGCATCCGTGTCAGAACATGCTCAAAATCA 518
Query 448 GATATAGAAATTGAAAATGGATTCATTTCCGAATCTTCCTCTATTTATATTTTAAATAAAGAAATACAATATAA 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATATAGAAATTGAAAATGGATTCATTTCCGAATCTTCCTCTATTTATATTTTAAATAAAGAAATACAATATAA 592
Query 522 ATGTAAACCAGGATATGCAACAGCAGATGGAAATTCTTCA--------TATATGGTTT---------------- 571
|||||||||||||||||||||||||||||||||||||||| ||.|| ||||
Sbjct 593 ATGTAAACCAGGATATGCAACAGCAGATGGAAATTCTTCAGGATCAATTACAT-GTTTGCAAAATGGATGGTCA 665
Query 572 ----------TTTGCATTTCT-----TAT--------------------------------------------- 585
||||||||.|| |||
Sbjct 666 GCACAACCAATTTGCATTACTGCTTGTATTGCATTCCGTGCTCACGCTCAGAAAAGTTGTACATGTCGGGGGAG 739
Query 586 -------------------------------------------------------------------------- 585
Sbjct 740 AAATGAGTGCTTAATTCTGAATTTCTGCTAGCGTCAGGAGAATCAGACCTTAATAATTTGTATCAATGATGCTA 813
Query 586 -------------------------------------------------------------------------- 585
Sbjct 814 CTGAGGATATCCAATCAAAAAATTATCTCTACCCTATTGTTTACTACAGAGAAAACAAGTAAAGGAAAAGGGTA 887
Query 586 -------------------------------------------------------------------------- 585
Sbjct 888 AGTGGGTGGGCTGAATGTTTACAAACCTCATACTTGCCAATGGATTCTTTACATGTAAAGTTCTCTGAACGTGC 961
Query 586 -------------------------------------------------------------------------- 585
Sbjct 962 TCGACCTTTACTTAGTATGATAAAGAGAATGCATAATGAACAAAGGAAATCTTTCAGTGGCAAAAGTTGATTTT 1035
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1036 TTTTCTTTCCTCTTTATATATTCACAAAGAGTTTTAAAGATAAATTGCTGAATGTATTTTTAACCCAAATACTG 1109
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1110 TTGTATAATTTACATACTCCCAAATCCACTTCATTTTCAAGGGTACAATTCAACTATTTTTAGTCATGAGATAA 1183
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1184 TATGGAACCTTGATACATAATACAACATGGAAGACTCTCAAAAATATTAAGCTAAGAGAGAAAAAAGATACACT 1257
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1258 TACAAAGTGATTATCTCAATGTTATCATGAGTTTTGGGGGTTATATGAATTCCTACATTTCTAGAATACTGTTT 1331
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1332 TCAATTTCTATACTTATCAAGGGCTCTGTGTAAAGAAAAAGGTGTATACTTCAATTTTACTCAGCTTTGATAAA 1405
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1406 TGATCTACTTTAAAACTTGTGAAATAAAAGACAGGATGCTTCATAAATTTTATAGAACTTATATCCAATTAATA 1479
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1480 TAATTTTTATCTAATATATACACCCTTACTGTTAGTAAATCGTTACATAACTACATAAATGGTTACATTAACTT 1553
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1554 TTAAATTCACAAATTTAAAAGCGGTTTAAGCTCCGTGACACATTGGACTACGAATGCTACGATGGATATGAAAT 1627
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1628 CAGTTATGGAAACACCACAGGTTCCATAGTGTGTGGTGAAGATGGGTAGTCCCATTTCCCAACATGTTATAGTA 1701
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1702 AGTATTTTATTCAAGTATTTTTTATTAGAATTAAATAAAATAATAAATAGACACCTACATATGTATATGTACAC 1775
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1776 ATATGTGTGTACATATATGTACATATATATGTAGTCCTCCTATGAGTGTGAATTATCTTGAGACTTAAAAAGAA 1849
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1850 AAAACAACGTTGAAAATGCAGATGTCTTCCTAAGAAATCAAATAAGATACAGTTAAGAGTATATAAAAAGCTTT 1923
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1924 ATTTAGAAAGTTTCCAATAAGACTATTGATTTTTCCCCACATATAAAGTATTTTTTTTCAGATTCTTCAGAAAA 1997
Query 586 -------------------------------------------------------------------------- 585
Sbjct 1998 GTGTGGGCCTCCTCCACCTATTAGCAATGGTGATACCACCTCCTTTCTACTAAAAGTGTATGTGCCACAGTCAA 2071
Query 586 -------------------------------------------------------------------------- 585
Sbjct 2072 GAGTCGAGTACCAATGCCAGCCCTACTATGAACTTCAGGGTTCTAATTATGTAACATGTAGTAATGGAGAGTGG 2145
Query 586 ----------------------------------------------------- 585
Sbjct 2146 TCGGAACCACCAAGATGCATACATCCATGTATAATAACTGAAGAAAACATGAA 2198
