Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11563
• Subject: XR_426757.2
• Aligned Length: 1101
• Identities: 696
• Gaps: 405

Alignment

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   |||
Sbjct    1  AATGAAAGATTTCAAACCCCAAACAGTGCAACTGAAACTTTTGTATTAGCATACTACTGAGAATATCTAACATG  74

Query    4  TTGTTACTAATCAATGTCATTCTGACCTTGTGGGTTTCCTGTGCTAATGGACAAGTGAAACCTTGTGATTTTCC  77
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TTGTTACTAATCAATGTCATTCTGACCTTGTGGGTTTCCTGTGCTAATGGACAAGTGAAACCTTGTGATTTTCC  148

Query   78  AGACATTAAACATGGAGGTCTATTTCATGAGAATATGCGTAGACCATACTTTCCAGTAGCTGTAGGAAAATATT  151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGACATTAAACATGGAGGTCTATTTCATGAGAATATGCGTAGACCATACTTTCCAGTAGCTGTAGGAAAATATT  222

Query  152  ACTCCTATTACTGTGATGAACATTTTGAGACTCCTTCAGGAAGTTACTGGGATTACATTCATTGCACACAAAAT  225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACTCCTATTACTGTGATGAACATTTTGAGACTCCTTCAGGAAGTTACTGGGATTACATTCATTGCACACAAAAT  296

Query  226  GGGTGGTCACCAGCAGTACCATGTCTCAGAAAATGTTATTTTCCTTATTTGGAAAATGGATATAATCAAAATTA  299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGGTGGTCACCAGCAGTACCATGTCTCAGAAAATGTTATTTTCCTTATTTGGAAAATGGATATAATCAAAATTA  370

Query  300  TGGAAGAAAGTTTGTACAGGGTAACTCTACAGAAGTTGCCTGCCATCCTGGCTACGGTCTTCCAAAAGCGCAGA  373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGAAGAAAGTTTGTACAGGGTAACTCTACAGAAGTTGCCTGCCATCCTGGCTACGGTCTTCCAAAAGCGCAGA  444

Query  374  CCACAGTTACATGTACGGAGAAAGGCTGGTCTCCTACTCCCAGATGCATCCGTGTCAGAACATGCTCAAAATCA  447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCACAGTTACATGTACGGAGAAAGGCTGGTCTCCTACTCCCAGATGCATCCGTGTCAGAACATGCTCAAAATCA  518

Query  448  GATATAGAAATTGAAAATGGATTCATTTCCGAATCTTCCTCTATTTATATTTTAAATAAAGAAATACAATATAA  521
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GATATAGAAATTGAAAATGGATTCATTTCCGAATCTTCCTCTATTTATATTTTAAATAAAGAAATACAATATAA  592

Query  522  ATGTAAACCAGGATATGCAACAGCAGATGGAAATTCTTCAGGATCAATTACATGTTTGCAAAATGGATGGTCAG  595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATGTAAACCAGGATATGCAACAGCAGATGGAAATTCTTCAGGATCAATTACATGTTTGCAAAATGGATGGTCAG  666

Query  596  CACAACCAATTTGCATTACTGCTTGTATTGCATTCCGTGCTCACGCTCAGAAAAGTTGTACATGTCGGGGGAGA  669
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CACAACCAATTTGCATTACTGCTTGTATTGCATTCCGTGCTCACGCTCAGAAAAGTTGTACATGTCGGGGGAGA  740

Query  670  AATGAGTGCTTAATTCTGAATTTCTGC-----------------------------------------------  696
            |||||||||||||||||||||||||||                                               
Sbjct  741  AATGAGTGCTTAATTCTGAATTTCTGCTAGCGTCAGGAGAATCAGACCTTAATAATTTGTATCAATGATGCTAC  814

Query  697  --------------------------------------------------------------------------  696
                                                                                      
Sbjct  815  TGAGGATATCCAATCAAAAAATTATCTCTACCCTATTGTTTACTACAGAGAAAACAAGTAAAGGAAAAGGCGGT  888

Query  697  --------------------------------------------------------------------------  696
                                                                                      
Sbjct  889  TTAAGCTCCGTGACACATTGGACTACGAATGCTACGATGGATATGAAATCAGTTATGGAAACACCACAGGTTCC  962

Query  697  --------------------------------------------------------------------------  696
                                                                                      
Sbjct  963  ATAGTGTGTGGTGAAGATGGGTAGTCCCATTTCCCAACATGTTATAATTCTTCAGAAAAGTGTGGGCCTCCTCC  1036

Query  697  -----------------------------------------------------------------  696
                                                                             
Sbjct 1037  ACCTATTAGCAATGGTGATACCACCTCCTTTCTACTAAAAGTGTATGTGCCACAGTCAAGAGTCG  1101